CV885079

Overview
NameCV885079
Unique NameCV885079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN10_ARATH (Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75680 PE=2 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 9.683e-71
Identity = 128/204 (62.75%), Postives = 153/204 (75.00%), Query Frame = 1
Query:  109 MGEKSKSKGCFGWFXXXXXXXXXXGAIVYTIK---KKTSHSDKXXXXXXXXXXXEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            M EKSKS+G  GWF           A+VYT+K   KK+   D            +KKYA+ALK+A+QFFD+QKSGKL NNKI WRGDS LKDG +  LDL+KG+YDAGDH+KFGFPMAFTATVLSW+ILEYGDQM+ V+QL PA+DSL+WITDYLI AHP +NVL +QVG+P  DH CWERPE M E+RPLT+++   PGTEVA
Sbjct:    1 MEEKSKSRGWCGWFIAIIVLASVILAVVYTVKLRTKKSGDDDGGGPVPGPPGAIDKKYADALKLALQFFDIQKSGKLENNKIPWRGDSGLKDGSEDNLDLSKGLYDAGDHIKFGFPMAFTATVLSWSILEYGDQMNAVNQLDPAKDSLRWITDYLIKAHPSDNVLYIQVGDPKVDHPCWERPEDMKEKRPLTKIDVDTPGTEVA 204          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN24_ORYSJ (Endoglucanase 24 OS=Oryza sativa subsp. japonica GN=Os09g0533900 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.940e-64
Identity = 117/202 (57.92%), Postives = 142/202 (70.30%), Query Frame = 1
Query:  121 SKSKGCFGWFXXXXXXXXXXGAIVYTIKKK-----TSHSDKXXXXXXXXXXXEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            SK+KGC GW            A V  I KK     +    K           + KY +AL VA+QFF VQK+GKL NN+I WRGDSAL DG+  GLDL+KGMYDAGDH+KF FPMAFTATVLSW+ILEYGDQM    QL PA D+L+WITD+L++AHP +NV  +QVG+PD DH CWERPE+M+E+RPLTQ+NT  PG++VA
Sbjct:    3 SKTKGCCGWLIVALVASLVATAAVVAIMKKKVGGGSGRKLKPLPVPGPPGAIDSKYGDALGVALQFFQVQKAGKLENNQIPWRGDSALDDGKPAGLDLSKGMYDAGDHIKFSFPMAFTATVLSWSILEYGDQMSATKQLDPALDALRWITDFLVNAHPSDNVFYIQVGDPDLDHNCWERPETMSEKRPLTQINTKSPGSDVA 204          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN2_ARATH (Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g19940 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.431e-63
Identity = 112/176 (63.64%), Postives = 140/176 (79.55%), Query Frame = 1
Query:  184 AIVYTIKKKTSHSDKXXXXXXXXXXXEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            A+++TI+ +++HSD             K YA ALK+AMQFFD+QKSGKL NN+ISWRGDS LKDG +  +DL+KG+YDAGDHMKFGFPMAFTATVLSW+ILEYGDQM  ++ L  A+DSLKW TD+LI+AHP  NVL +QVG+P  DHKCW+RPE+MT +R LT+++T  PGTEVA
Sbjct:   27 AVIFTIRHRSNHSDDDGSNV-------KNYANALKIAMQFFDIQKSGKLENNEISWRGDSGLKDGSEASIDLSKGLYDAGDHMKFGFPMAFTATVLSWSILEYGDQMASLNLLDHAKDSLKWTTDFLINAHPSPNVLYIQVGDPVTDHKCWDRPETMTRKRTLTKIDTKTPGTEVA 195          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN18_ORYSJ (Endoglucanase 18 OS=Oryza sativa subsp. japonica GN=Os06g0715300 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.474e-58
Identity = 101/150 (67.33%), Postives = 123/150 (82.00%), Query Frame = 1
Query:  262 EKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            + KYA+AL VA+QFF VQKSGKLVNN I WRGDSAL DG++ G+DL+KGMYDAGDHMKFGFPMAFTAT+LSW++LEYGD M   DQ   A D+L WI DYL++AHP ++VL +QVG+P  DHKCWERPE M E+RPLT++    PG++VA
Sbjct:   47 DHKYADALAVALQFFQVQKSGKLVNNTIHWRGDSALDDGKEAGIDLSKGMYDAGDHMKFGFPMAFTATMLSWSVLEYGDAMRAADQRDSAIDALNWIMDYLVNAHPSDDVLYIQVGDPKADHKCWERPEKMKEKRPLTKITPKSPGSDVA 196          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN4_THEFU (Endoglucanase E-4 OS=Thermomonospora fusca GN=celD PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.231e-42
Identity = 83/148 (56.08%), Postives = 106/148 (71.62%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            YAEAL+ +M F++ Q+SGKL  NN++SWRGDS L DG D+GLDLT G YDAGDH+KFGFPMAFTAT+L+W  +E  +      Q+   +D+L+W+ DY I AHP  NVL VQVG+ D DHK W   E M  ERP  +V+ S PG++VA
Sbjct:   52 YAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVA 199          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN12_ARATH (Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44540 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 78/148 (52.70%), Postives = 106/148 (71.62%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            YAEAL+ ++ +F+ Q+SGKL  N K++WRGDSALKDG D  +DLT G YDAGD+MKFGFP+AFT T+L+W+ +E G ++    +   +  +LKW TDYLI AHP+ NVL  QVG  + DHKCW RPE MT  R   +++   PG+++A
Sbjct:   34 YAEALQKSLLYFEAQRSGKLPPNQKVTWRGDSALKDGSDAHIDLTGGYYDAGDNMKFGFPLAFTTTMLAWSNIEMGSELRAHHEQGNSLRALKWATDYLIKAHPQPNVLYGQVGEGNSDHKCWMRPEDMTTPRTSYRIDAQHPGSDLA 181          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN13_ARATH (Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44550 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.781e-40
Identity = 78/148 (52.70%), Postives = 105/148 (70.95%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            YAEALK ++ +F+ Q+SGKL  N +++WRGDSAL+DG D  +DLT G YDAGD+MKFGFP+AFT T+L+W+ +E   Q+    +   A  +LKW TDYLI AHP+ NVL  QVG  + DHKCW RPE MT  R   +++   PG+++A
Sbjct:   34 YAEALKNSLLYFEAQRSGKLPPNQRVTWRGDSALRDGSDAHIDLTGGYYDAGDNMKFGFPLAFTTTMLAWSNIEMASQLRAHHEKGNALRALKWATDYLIKAHPQPNVLYGQVGEGNSDHKCWMRPEDMTTPRTSYRIDAQHPGSDLA 181          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN5_ORYSJ (Endoglucanase 5 OS=Oryza sativa subsp. japonica GN=Os02g0151300 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 76/148 (51.35%), Postives = 101/148 (68.24%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            Y EAL  ++ +F+ Q+SG+L  N ++ WRG S L DG + G+DL  G YDAGDH+KFG PMAFT T+LSW++LEYG+++    +L  A  ++KW TDY I AH   NVL  QVG+ D DH CW+RPE MT  R   +V+   PG+EVA
Sbjct:   30 YGEALSKSLLYFEAQRSGRLPYNQRVRWRGHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSVLEYGEEIAAAGELGHALHAIKWGTDYFIKAHTHPNVLWTQVGDGDSDHYCWQRPEDMTTSRHAYKVDAENPGSEVA 177          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN14_ARATH (Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44560 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.359e-39
Identity = 73/150 (48.67%), Postives = 107/150 (71.33%), Query Frame = 1
Query:  265 KKYAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            + Y +AL  ++ +F+ Q+SGKL +N +++WRGDSAL+DG D  +DLT G YDAGD+MKFGFP+AF  T+L+W+ +E   Q+    + + A  +LKW TD+LI AHP+ NVL  QVG+ + DH+CW RPE MT  RP  +++   PG+++A
Sbjct:   32 RNYGDALTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDAHVDLTGGYYDAGDNMKFGFPLAFFTTMLAWSNIEMATQLKAHQEQENALAALKWATDFLIKAHPEPNVLYGQVGDGNSDHECWMRPEDMTTPRPSFRIDAQHPGSDLA 181          
BLAST of CV885079 vs. ExPASy Swiss-Prot
Match: GUN15_ORYSJ (Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.387e-39
Identity = 75/148 (50.68%), Postives = 103/148 (69.59%), Query Frame = 1
Query:  271 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMTEERPLTQVNTSFPGTEVA 711
            YA AL+ ++ +F  Q+SG L  N ++SWR  S L DG+  G+DL  G YDAGD++KFG PMAFT T++SW+ILEYG QM    +L+ A D++KW TDY I AHP+ +VL  +VG+ D DH CW+RPE MT  R   +V+   PG+++A
Sbjct:   35 YAMALRKSILYFQAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLA 182          
The following BLAST results are available for this feature:
BLAST of CV885079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN10_ARATH9.683e-7162.75Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75... [more]
GUN24_ORYSJ3.940e-6457.92Endoglucanase 24 OS=Oryza sativa subsp. japonica G... [more]
GUN2_ARATH7.431e-6363.64Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g199... [more]
GUN18_ORYSJ2.474e-5867.33Endoglucanase 18 OS=Oryza sativa subsp. japonica G... [more]
GUN4_THEFU7.231e-4256.08Endoglucanase E-4 OS=Thermomonospora fusca GN=celD... [more]
GUN12_ARATH7.995e-4152.70Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN13_ARATH1.781e-4052.70Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN5_ORYSJ5.182e-4051.35Endoglucanase 5 OS=Oryza sativa subsp. japonica GN... [more]
GUN14_ARATH3.359e-3948.67Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN15_ORYSJ4.387e-3950.68Endoglucanase 15 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012E03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885079 ID=CV885079; Name=CV885079; organism=Citrus sinensis; type=EST; length=713bp
CGTTTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTACTCTCTTCAC
CCAATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTTGACGGCATT
GTGTTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTCGGATGGTTC
TTGGTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGTTTACACTAT
TAAAAAGAAAACAAGTCACTCTGATAAACCGGCTCCGGTTCCCGGTCCCC
CCGGCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTCGCAATGCAG
TTCTTCGACGTACAAAAATCGGGAAAGTTAGTGAATAATAAGATATCATG
GAGAGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTTTGGATCTCA
CAAAAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGGTTTCCGATG
GCTTTTACTGCGACTGTGTTGTCGTGGGCCATCCTTGAGTATGGAGATCA
GATGGACGTTGTGGATCAGTTGCAACCAGCTCAGGATTCTCTCAAGTGGA
TCACTGATTATCTTATCAGTGCTCATCCCAAAGAGAATGTCCTTATTGTT
CAGGTGGGCAATCCTGATAAGGACCACAAATGTTGGGAAAGACCTGAAAG
CATGACTGAAGAGAGACCACTCACTCAGGTCAACACATCCTTTCCTGGAA
CAGAGGTTGCAGC
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