CV885064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885064 vs. ExPASy Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 440.654 bits (1132), Expect = 5.376e-123 Identity = 206/263 (78.33%), Postives = 229/263 (87.07%), Query Frame = -2 Query: 96 PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPEIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANY 884 PVYS ++++QGITILAPV SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD+YGIAYGMPTKQL+IRRLTCISP+SAVIALGSEMSGGIQDVRAEDI AI+SESG+RIKT +GRGG+VKDIYVR MTMKTMKWAFW+TG+YGSH DN+YDP A P IQ INYRDMVAENV+MAARLEGI DPFTGICISNVTI L K KK+ W CTD+ GISSGVTP PC LPD P +T+ CNFP LP++ + +Q CSY NY Sbjct: 227 PVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLCNFPAESLPIDTVELQKCSYGINY 489
BLAST of CV885064 vs. ExPASy Swiss-Prot
Match: PGLR_RHIRD (Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17 Identity = 61/178 (34.27%), Postives = 85/178 (47.75%), Query Frame = -2 Query: 351 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKT-AVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDNNYD----------PHALPEIQNINYRDMVAENVTMAA 848 TI+AP SPNTDG NP+SC N I GDDC+AVK+G G + + I R + P + +GSEMSGG+ DV ED I ++ G+R+KT A GG V +I +RR+ + ++ A Y D + D P + I D+ N+ AA Sbjct: 62 TIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGITVRHCLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAA 239
BLAST of CV885064 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14 Identity = 71/238 (29.83%), Postives = 111/238 (46.64%), Query Frame = -2 Query: 177 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMS-GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPEIQNINYRDMVAENVTMAARLEGIAGD--PFTGICISNVTIELTN-KPKKLQWNCTD--ITGISSGVTPKPCE-LLPDHEPAQ 866 V +QG+ I AP SPNTDGI+ + IE C I +GDDC+A+ +G + + I+ L C I +LG + S + V ID+++G+RIKT G G I + M + I Y + + + +IQ + Y+++ + T AA ++ + D P TGI +SNV+++LT+ KP +C D G SG C+ L P P + Sbjct: 217 VKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSAT-AAAIQLMCSDSVPCTGIQLSNVSLKLTSGKPA----SCVDKNARGFYSGRLIPTCKNLRPGPSPKE 438
BLAST of CV885064 vs. ExPASy Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.039e-13 Identity = 77/274 (28.10%), Postives = 118/274 (43.07%), Query Frame = -2 Query: 57 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMS-GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPEIQNINYRDMVAENVTMAARLEGIAGD--PFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL*RELLRMCKGFQ 866 V +QGI I AP SPNTDGI+ + IE C I +GDDCVAV +G + + I+ LTC I +LG S + V + ID+++G+RIKT G G I + M + I Y + + + +IQ++ ++++ + T AA ++ + D P + I +SNV ++LT+ N ++ + P L P P + P L E MG + S N CKG Q Sbjct: 218 VKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTG-----------SSNITIKDLTCGPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAA-IQLMCSDSVPCSNIKLSNVFLKLTSGKVATCVNKNANGYYTNPLNPSCKSLHPGRTPKELELHQKPTTLLMDEKMGASLNSSPPN-----CKNKCKGCQ 474
BLAST of CV885064 vs. ExPASy Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.726e-12 Identity = 60/228 (26.32%), Postives = 107/228 (46.93%), Query Frame = -2 Query: 207 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALG-SEMSGGIQDVRAEDITAIDSESGVRIKT-AVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPEIQNINYRDM-VAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTP-KPC 875 S++V + G+ + A SPNTDGI+ +S + I + I +GDDC+++ G + + I+ + C I +LG +E G+ +V ++ + + +GVRIKT F ++I + + MK +K I Y H + ++ N+ Y D+ N +A L+ P TGI + +V + ++P Q +C + G ++ V P PC Sbjct: 184 SNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPG-----------STNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLHKPCPKQESGV-KVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHRP--AQASCDNANGSANDVVPFTPC 397
BLAST of CV885064 vs. ExPASy Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.726e-12 Identity = 58/198 (29.29%), Postives = 95/198 (47.98%), Query Frame = -2 Query: 288 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMSGG-IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPEIQNINYRDMVAENVT-MAARLEGIAGDPFTGICISNVTIE 872 + V V + I AP SPNTDGI+ + N R+ + I +GDDC++++ G T+ L I LTC I +LG + S + + + +S++GVRIKT G G K+I + + M+ +K I Y D D + +++N+ Y+++ + T +A L P GI + NV I+ Sbjct: 224 NKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDG-----------TQNLQIFDLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDY-CDKDKCEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKIK 409
BLAST of CV885064 vs. ExPASy Swiss-Prot
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11 Identity = 66/250 (26.40%), Postives = 113/250 (45.20%), Query Frame = -2 Query: 126 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMS-GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPEIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMG 866 V + GI+I AP SPNTDGI+ + N ++ I +GDDCVA+ +G + ++I L C I +LG E S + V ID+++G+RIKT G G I + M + I Y + + + +IQ++ Y+++ + T AA +L+ P I +S+++++LT+ N + G SG C+ L + ++ + + V+NMG Sbjct: 217 VKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG-----------SSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDISLKLTSGKIASCLN-DNANGYFSGHVIPACKNLSPSAKRKESKSHKHPKTVMVKNMG 454
BLAST of CV885064 vs. ExPASy Swiss-Prot
Match: PGLR5_ARATH (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11 Identity = 57/224 (25.45%), Postives = 98/224 (43.75%), Query Frame = -2 Query: 207 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMS-GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPEIQNINYRDMVAENVTM-AARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPC 866 V + G+ ++AP TSPNTDGI+ I++ + +GDDC+++ + Q+ I + C I +LG S ++D+ + D+ +GVRIKT G G V I R + M + I Y + + I+NI++ + + + A ++ P I + ++ +E +N + C + G SSG V P PC Sbjct: 211 VTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKN-----------STQISISNIICGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTESFCWEAYGSSSGQVYPPPC 423
BLAST of CV885064 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11 Identity = 58/225 (25.78%), Postives = 100/225 (44.44%), Query Frame = -2 Query: 207 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMSGG-IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPEIQNINYRDMVAENVTMAARLEGIAGD-PFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 872 S+V V + + AP SPNTDGI+ + N R+ + I +GDDC++++SG ++ + I +TC I +LG + S + V + +++GVRIKT G G +I + + M +K I Y + A+ +++N+ YRD+ + + A + + P GI + V I K + CT+ + G C Sbjct: 224 SNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAV-QVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNI------KGGKATCTNANVVDKGAVLPQC 430
BLAST of CV885064 vs. ExPASy Swiss-Prot
Match: PGLR_SOLLC (Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.473e-11 Identity = 49/199 (24.62%), Postives = 93/199 (46.73%), Query Frame = -2 Query: 291 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG----IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPEIQNINYRDMVAENVT-MAARLEGIAGDPFTGICISNVTI 872 ++V+ + I A SPNTDG++ + +I D I +GDDC+++ SG ++ + +TC I++GS SG + +V + I +E+GVRIKT G G +I + M+ +K+ I +Y + + +++N+ Y ++ + T +A + + P GI + N+ + Sbjct: 230 TNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSG-----------SQNVQATNITCGPGHG--ISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSATKVAIKFDCSTNFPCEGIIMENINL 415 The following BLAST results are available for this feature:
BLAST of CV885064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885064 ID=CV885064; Name=CV885064; organism=Citrus sinensis; type=EST; length=885bpback to top |