CV885063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885063 vs. ExPASy Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 1.457e-98 Identity = 169/225 (75.11%), Postives = 196/225 (87.11%), Query Frame = 1 Query: 163 LNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEPWWRKFRAGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 837 L+ + E RK R + EYSAISCRAHSASL +FGGVGDG T NTKAF+ A+ LS++ SEGG+QL+VP GKWLTGSF+LTSHFTLFLH+DAVLLASQD +WPVI+PLPSYGRGRD GRY+SLIFGTNLTDV+ITGDNGTIDGQG WW++F G+LKYTRPYLIE+M+S +IQISNLTL+NSPSWNVHPVYS ++++QGITILAPV SPNTDGINPDSCTN Sbjct: 35 LSVSRGECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTN 259
BLAST of CV885063 vs. ExPASy Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.445e-13 Identity = 60/207 (28.99%), Postives = 97/207 (46.86%), Query Frame = 1 Query: 238 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-------GSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEPWWRKFRAGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 837 +++ + +FG VGDG T +++AF A + + G Q VP G GS T F L K L + + W +G + ++F T++ +VI GD G I+GQG WW E K +RP ++ N+++S LT ++SP ++H + V + + I AP +SPNTDGI+ + +N Sbjct: 21 SNALDVTQFGAVGDGVTDDSQAFLKAWEAVC--SGTGDGQFVVPAGMTFMLQPLKFQGSCKSTPVFVQMLGK----LVAPSKGNW---------------KGDKDQWILF-TDIEGLVIEGD-GEINGQGSSWW------EHKGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSN 198
BLAST of CV885063 vs. ExPASy Swiss-Prot
Match: PGLR1_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=peh PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 63/179 (35.20%), Postives = 83/179 (46.37%), Query Frame = 1 Query: 340 SEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE--------PWW---RKFRAGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYS--SSVIVQGITILAPVTSPNTDGINPDSCTN 837 S G S +F L+G +L S +L + K L A + K + E PS DT G + I T+ T+ I G GTIDGQG WW + +LK P LI+I S+N + N++LINSP N H V+S TI P T+ NTDGI+P S N Sbjct: 71 SAGSSSVF------LSGPLSLPSGVSLLIDKGVTLRAVNNAKSF---ENAPSSCGVVDTNGKGCDAFITATSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKN 237
BLAST of CV885063 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.766e-11 Identity = 58/203 (28.57%), Postives = 90/203 (44.33%), Query Frame = 1 Query: 250 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS---FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEPWWRKFRAGELKYT----------RPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 819 ++E++G VGDG +T+AF + + + + L VP K + F L D ++A D W + + + LTD + G G IDGQG+ WW AG+ K RP I+I +S+++ + LTL+NSP +++ V +QG+ I AP SPNTDGI+ Sbjct: 60 NVEQYGAVGDGKHDSTEAFATTWNAACK---KASAVLLVPANKKFFVNNLVFRGPCQPHLSFKVDGTIVAQPDPARWKNSKIWLQFAQ-----------------LTDFNLMG-TGVIDGQGQQWW----AGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGID 237 The following BLAST results are available for this feature:
BLAST of CV885063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885063 ID=CV885063; Name=CV885063; organism=Citrus sinensis; type=EST; length=837bpback to top |