EY665354

Overview
NameEY665354
Unique NameEY665354
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1040
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665354 vs. ExPASy Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 5.901e-16
Identity = 33/93 (35.48%), Postives = 48/93 (51.61%), Query Frame = 3 
Query:  114 MLGVFSSAIVSPPEELVA--AGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQNESPLRQRLFAVKDEIFCLFEGALDNLGSLR 386
            ML VF  +I  PP EL    AG +    KT    + + F      +    + +   +A++H NE+PL+ R   V D++FC+F GALDN   LR
Sbjct:    1 MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREE-IAESFKTWKQDSTFYHLFNGNFMAFSHGNENPLQPRSIVVMDDVFCIFSGALDNTFDLR 92

HSP 2 Score: 49.6766 bits (117), Expect = 5.901e-16
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 2 
Query:  419 EVILVNEAYKALRDRAPYPPNLSLATLGGTFAFIVYNNSTSPLGL 553
            E +++ EAYK LRDRAPYPP+  +  L G FAFI++++  S L L
Sbjct:  103 EAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDSKASTLFL 147
The following BLAST results are available for this feature:
BLAST of EY665354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TSJT1_TOBAC5.901e-1635.48Stem-specific protein TSJT1 OS=Nicotiana tabacum G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-H11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665354 ID=EY665354; Name=EY665354; organism=Citrus sinensis; type=EST; length=1040bp
CTTTGAACTTTCCAGTTAAAGCCAAAGAGTTCCGAACGGATCAAAGTTTT
CTTGTAGGAGAGAGAAATTTCTAGGGCGAGAAAGCGAGAGAAAAGGAAAT
TTGGTAGCTTAAAATGTTGGGAGTGTTCAGCAGCGCGATCGTTTCACCTC
CAGAGGAGCTGGTGGCGGCCGGAAGCCGGACTCCGTCGCCGAAGACCACA
TCGACGGCACTGGTCGACCGTTTCCTCCAGACCAACTCGTCTGCTGTGTC
CGTACAGGTCGGGGACAACGTCACCCTCGCGTACACTCATCAGAACGAGT
CTCCTTTACGGCAAAGATTATTTGCTGTGAAAGATGAGATCTTTTGCTTG
TTTGAGGGAGCACTTGATAACTTGGGAAGCCTGAGGGCAGCAATATGGAC
TAGCTAATTCGGCAAAATGAAGTGATCTTGGTGAATGAGGCATACAAGGC
TCTGCGTGATCGGGCCCCTTACCCCCCAAACCTGTCGTTGGCCACCTTAG
GGGGTACTTTTGCCTTCATTGTCTACAACAATTCCACCTCCCCCCTTGGT
TTGGGGGGGTTCTGGAGGGTTATTTTAATTTTCTTACCCAACCAAAAAAC
CTAATGGAAAAGCTTAACCCTTTTTGGTTGGTTTTGGGAAAACACCTTTT
TTTATATAAAAGGGTTAAAAATGGGGGGCGAGGAACACAATTTTTGGGAA
AGGGTCCCCCCTTTTTATTTGGGGAAACACCCCGGGGAAGAAGGGAAATG
TTTTCCCCTTGTCCTGAAAAAAAGCGTAAAATTTGCCCAAAAGGGGGGTG
TGGGGGAGAAAAGACCATTTTGTCTTTTTTTCCCCCCAGGGGGGGGTGTT
TTTTTTTCCCACAAACCCGATGTGTGGGAGAGAACGGAAAAAAAAAGTTT
GTGAAAAACACCCAAAAAAAAAAGAAAGTTCCCCTGTGGGGGGGTCCCCG
CCGGTGGGGACGGAAAAAAAAAAAAAAAGAAGGAGCGTGAGGGGGGGGGG
CGCCACACCAAATTTTCAAAGCGGGAAGGAGACGGGGGTG
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