EH406522

Overview
NameEH406522
Unique NameEH406522
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EH406522 vs. ExPASy Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 2.102e-38
Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 1 
Query:    1 DSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEEAPSKMKVSGGDVILGQ 273
            DSVICV+VNDP+ +NGWAEKL AKD IEFYGDFDG FHKSL L KDLSAALLGPRSERWSAYVEDG++KA+NVEEAPS  KV+G +VILGQ
Sbjct:  110 DSVICVSVNDPFAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAVNVEEAPSDFKVTGAEVILGQ 200
[Close]
BLAST of EH406522 vs. ExPASy Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.968e-36
Identity = 73/91 (80.22%), Postives = 79/91 (86.81%), Query Frame = 1 
Query:    1 DSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEEAPSKMKVSGGDVILGQ 273
            DSVICV+VNDPY +NGWAEKLQAKD IEFYGDFDGSFHKSLDL  DLSAALLG RS RWSA+V+DG+IKA NVE APS  KVSG +VIL Q
Sbjct:  107 DSVICVSVNDPYALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVEVAPSDFKVSGAEVILDQ 197
The following BLAST results are available for this feature:
BLAST of EH406522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PRX2F_ARATH2.102e-3881.32Peroxiredoxin-2F, mitochondrial OS=Arabidopsis tha... [more]
PRX2F_ORYSJ1.968e-3680.22Peroxiredoxin-2F, mitochondrial OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK3AH06FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406522 ID=EH406522; Name=EH406522; organism=Citrus sinensis; type=EST; length=482bp
GATTCTGTAATTTGTGTGGCCGTTAATGATCCATACGTTATGAATGGCTG
GGCAGAGAAACTTCAAGCCAAAGATGTTATTGAATTTTATGGTGACTTTG
ATGGAAGCTTCCACAAGAGCTTGGACTTGGGAAAAGATCTTTCTGCTGCT
TTGCTTGGTCCTCGCTCTGAAAGGTGGTCAGCATATGTAGAGGATGGGAG
GATTAAGGCTCTTAATGTGGAGGAAGCACCATCAAAGATGAAGGTTTCTG
GTGGCGATGTCATTTTGGGACAGATCTAAATATGTTTCAGTATCATTTGC
CATTGATTCAAGCTTTTGTATGCGTAGAACATGTTTTTCAATTACTCTTA
GCAGAGAAGGTCAGCGAGTAATAACTTGGAAATGTTGCTCCAATCTAGTT
ATAGTGTTATCTTTCTTACTTTTGTTAATCCTCTGAAAATCTCCTACATT
GTGAATAAGTTTATGGTAAAAGCAGTTTGAGA
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