CV884978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: NFS2_ARATH (Cysteine desulfurase 2, chloroplastic OS=Arabidopsis thaliana GN=NFS2 PE=1 SV=1) HSP 1 Score: 424.861 bits (1091), Expect = 3.654e-118 Identity = 204/265 (76.98%), Postives = 231/265 (87.17%), Query Frame = -1 Query: 199 ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNVFK 993 E PD++KL+E++S KTKLV +HH+SN+LAS LPIEEIV W+HDVGAKVLVDACQSVPHMVVDVQ L+ADFLVASSHKMCGPTGIGFL+GKSDLL +MPPFLGGGEMISDVFLDHST+A+PPSRFEAGTP +DYLS IGM KIH YE+E+ KYLYE L S+P++RIYGP+PSE V R ALCSFNVE +HPTD+AT LDQQ+GVA RSGHHCAQPLHRYLGVNASARASL+FYNTK+DVD FI AL +TVSFFN FK Sbjct: 199 EVPDINKLRELISPKTKLVAVHHVSNVLASSLPIEEIVVWAHDVGAKVLVDACQSVPHMVVDVQKLNADFLVASSHKMCGPTGIGFLYGKSDLLHSMPPFLGGGEMISDVFLDHSTYAEPPSRFEAGTPAIGEAIALGAAVDYLSGIGMPKIHEYEVEIGKYLYEKLSSLPDVRIYGPRPSESVHRGALCSFNVEGLHPTDLATFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKDDVDAFIVALADTVSFFNSFK 463
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_SYNY3 (Probable cysteine desulfurase OS=Synechocystis sp. (strain PCC 6803) GN=csd PE=1 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 1.450e-82 Identity = 148/262 (56.49%), Postives = 187/262 (71.37%), Query Frame = -1 Query: 208 ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 993 ES DL+ K +LS KTKLV + HISN L + P EEI +H GAKVLVDACQS PH +DVQ +D D+LVAS HKMC PTGIGFL+GK ++L AMPPF GGGEMI++VF DH T + P +FEAGTP +DYL+ +GM+ IH YE+EL YL++ L IP +R+YGP P +H RAAL SFNV +H +D+AT++DQ G+A RSGHHC QPLHR + SARASL+FYNTKE++D F+ +L T+ FF+ Sbjct: 155 ESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNP-KHGDRAALASFNVAGLHASDVATMVDQD-GIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFS 414
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_STAES (Probable cysteine desulfurase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=csd PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.969e-63 Identity = 123/258 (47.67%), Postives = 170/258 (65.89%), Query Frame = -1 Query: 208 LDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 981 LD +K ++ KTK+V I H+SN+L +I ++ I +H+ GA + VD QS PHM +D+Q +DADF S HKM GPTGIG L+GK +LL M P GG+MI V ST+AD P++FEAGTP I Y+ +G IH +E EL +Y YE +L+I + IYGP +RA + +FN+ +IHP D+AT +D + GVA R+GHHCAQPL ++LGV+++ARAS + YNTKEDVD+ + AL +T FF+ Sbjct: 157 LDDIKATINDKTKIVAIAHVSNVLGTINDVKTIAKIAHEHGAVISVDGAQSAPHMALDMQDIDADFYSFSGHKMLGPTGIGVLYGKRELLQNMEPVEFGGDMIDFVSKYDSTWADLPTKFEAGTPLIAQAIGLAEAIHYIENLGFNAIHQHEKELTEYAYEQMLTIDGLEIYGPPKD---RRAGVITFNLADIHPHDVATAVDTE-GVAVRAGHHCAQPLMKWLGVSSTARASFYVYNTKEDVDQLVQALKQTKEFFS 410
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_STAEQ (Probable cysteine desulfurase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=csd PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 4.388e-63 Identity = 122/258 (47.29%), Postives = 170/258 (65.89%), Query Frame = -1 Query: 208 LDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 981 LD +K ++ KTK+V I H+SN+L +I ++ I +H+ GA + VD QS PHM +D+Q +DADF S HKM GPTGIG L+GK +LL M P GG+MI V +T+AD P++FEAGTP I Y+ +G IH +E EL +Y YE +L+I + IYGP +RA + +FN+ +IHP D+AT +D + GVA R+GHHCAQPL ++LGV+++ARAS + YNTKEDVD+ + AL +T FF+ Sbjct: 157 LDDIKATINDKTKIVAIAHVSNVLGTINDVKTIAKIAHEHGAVISVDGAQSAPHMALDMQDIDADFYSFSGHKMLGPTGIGVLYGKRELLQNMEPVEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIHYIENLGFNAIHQHEKELTEYAYEQMLTIDGLEIYGPPKD---RRAGVITFNLADIHPHDVATAVDTE-GVAVRAGHHCAQPLMKWLGVSSTARASFYVYNTKEDVDQLVQALKQTKEFFS 410
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_BACSU (Probable cysteine desulfurase OS=Bacillus subtilis GN=csd PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 7.484e-63 Identity = 120/261 (45.98%), Postives = 173/261 (66.28%), Query Frame = -1 Query: 202 LDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF-NVF 981 L+ ++E ++ TK+V + H+SN+L ++ PI+E+ +HD GA ++VD QS PHM +DVQ LD DF SSHKMCGPTG+G L+GK LL M P GGEMI V L ST+ + P +FEAGTP ID+L IG+ +I +E +LA Y E + + +YGP+ +RA L +FN++++HP D+AT+LD + G+A R+GHHCAQPL ++L V A+ARAS + YNT+E++D+ + AL +T +F NVF Sbjct: 152 LEDVRETVTSNTKIVAVSHVSNVLGTVNPIKEMAKIAHDNGAVIVVDGAQSTPHMKIDVQDLDCDFFALSSHKMCGPTGVGVLYGKKALLENMEPAEFGGEMIDFVGLYESTWKELPWKFEAGTPIIAGAIGLGAAIDFLEEIGLDEISRHEHKLAAYALERFRQLDGVTVYGPE-----ERAGLVTFNLDDVHPHDVATVLDAE-GIAVRAGHHCAQPLMKWLDVTATARASFYLYNTEEEIDKLVEALQKTKEYFTNVF 406
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_STAAW (Probable cysteine desulfurase OS=Staphylococcus aureus (strain MW2) GN=csd PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.336e-62 Identity = 122/259 (47.10%), Postives = 170/259 (65.64%), Query Frame = -1 Query: 208 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 984 +++ +K+ ++ KTK+V I HISN+L +I ++ I +H GA + VD Q+ PHM +D+Q ++ADF S HKM GPTGIG LFGK +LL M P GG+MI V +T+AD P++FEAGTP I YL IG IH YE EL Y YE + +I I IYGP +RA + +FN++++HP D+AT +D + GVA R+GHHCAQPL ++L V+++ARAS + YNTKEDVD+ I+AL +T FF+ Sbjct: 156 NIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKD---RRAGVITFNLQDVHPHDVATAVDTE-GVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFS 410
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_STAAS (Probable cysteine desulfurase OS=Staphylococcus aureus (strain MSSA476) GN=csd PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.336e-62 Identity = 122/259 (47.10%), Postives = 170/259 (65.64%), Query Frame = -1 Query: 208 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 984 +++ +K+ ++ KTK+V I HISN+L +I ++ I +H GA + VD Q+ PHM +D+Q ++ADF S HKM GPTGIG LFGK +LL M P GG+MI V +T+AD P++FEAGTP I YL IG IH YE EL Y YE + +I I IYGP +RA + +FN++++HP D+AT +D + GVA R+GHHCAQPL ++L V+++ARAS + YNTKEDVD+ I+AL +T FF+ Sbjct: 156 NIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKD---RRAGVITFNLQDVHPHDVATAVDTE-GVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFS 410
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_STAAR (Probable cysteine desulfurase OS=Staphylococcus aureus (strain MRSA252) GN=csd PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.336e-62 Identity = 122/259 (47.10%), Postives = 170/259 (65.64%), Query Frame = -1 Query: 208 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 984 +++ +K+ ++ KTK+V I HISN+L +I ++ I +H GA + VD Q+ PHM +D+Q ++ADF S HKM GPTGIG LFGK +LL M P GG+MI V +T+AD P++FEAGTP I YL IG IH YE EL Y YE + +I I IYGP +RA + +FN++++HP D+AT +D + GVA R+GHHCAQPL ++L V+++ARAS + YNTKEDVD+ I+AL +T FF+ Sbjct: 156 NIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKD---RRAGVITFNLQDVHPHDVATAVDTE-GVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFS 410
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_STAAC (Probable cysteine desulfurase OS=Staphylococcus aureus (strain COL) GN=csd PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.336e-62 Identity = 122/259 (47.10%), Postives = 170/259 (65.64%), Query Frame = -1 Query: 208 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 984 +++ +K+ ++ KTK+V I HISN+L +I ++ I +H GA + VD Q+ PHM +D+Q ++ADF S HKM GPTGIG LFGK +LL M P GG+MI V +T+AD P++FEAGTP I YL IG IH YE EL Y YE + +I I IYGP +RA + +FN++++HP D+AT +D + GVA R+GHHCAQPL ++L V+++ARAS + YNTKEDVD+ I+AL +T FF+ Sbjct: 156 NIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKD---RRAGVITFNLQDVHPHDVATAVDTE-GVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFS 410
BLAST of CV884978 vs. ExPASy Swiss-Prot
Match: CSD_STAAN (Probable cysteine desulfurase OS=Staphylococcus aureus (strain N315) GN=csd PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 8.275e-62 Identity = 121/259 (46.72%), Postives = 170/259 (65.64%), Query Frame = -1 Query: 208 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPXXXXXXXXXXXIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 984 +++ +K+ ++ KTK+V I HISN+L +I ++ I +H GA + VD Q+ PHM +D+Q ++ADF S HKM GPTGIG LFGK +LL M P GG+MI V +T+AD P++FEAGTP I YL IG IH YE EL Y YE + +I I IYGP +RA + +FN++++HP D+AT +D + GVA R+GHHCAQPL ++L V+++ARAS + YNTKED+D+ I+AL +T FF+ Sbjct: 156 NIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKD---RRAGVITFNLQDVHPHDVATAVDTE-GVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDIDQLINALKQTKEFFS 410 The following BLAST results are available for this feature:
BLAST of CV884978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884978 ID=CV884978; Name=CV884978; organism=Citrus sinensis; type=EST; length=993bpback to top |