CV884900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884900 vs. ExPASy Swiss-Prot
Match: GOT1B_MOUSE (Vesicle transport protein GOT1B OS=Mus musculus GN=Golt1b PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20 Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 228 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 527 DK LLA+GN+LF+AG++ IGL+ T +FF +R K T WP++GMI E YGF +LF GF+P + F++R+P+LG L P +RSF D+ Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQRHKVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130
BLAST of CV884900 vs. ExPASy Swiss-Prot
Match: GOT1B_HUMAN (Vesicle transport protein GOT1B OS=Homo sapiens GN=GOLT1B PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.982e-20 Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 228 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 527 DK LLA+GN+LF+AG++ IGL+ T +FF ++ K T WP++GMI E YGF +LF GF+P + F++R+P+LG L P +RSF D+ Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130
BLAST of CV884900 vs. ExPASy Swiss-Prot
Match: GOT1B_BOVIN (Vesicle transport protein GOT1B OS=Bos taurus GN=GOLT1B PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.982e-20 Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 228 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 527 DK LLA+GN+LF+AG++ IGL+ T +FF ++ K T WP++GMI E YGF +LF GF+P + F++R+P+LG L P +RSF D+ Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130
BLAST of CV884900 vs. ExPASy Swiss-Prot
Match: GOT1A_BOVIN (Vesicle transport protein GOT1A OS=Bos taurus GN=GOLT1A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.012e-16 Identity = 45/94 (47.87%), Postives = 54/94 (57.45%), Query Frame = 3 Query: 228 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFL---QRIPILGWLFQQ 500 D LLA GN+LF+ G+SL IGL+ T FF +R +KGT WP+LGM LETYGF LF GF+P FL IP L LFQ+ Sbjct: 31 DSVLLAFGNLLFLTGLSLIIGLRRTFSFFFQRHKFKGTSFFLGGVVIVLLRWPLLGMCLETYGFFSLFRGFFPVAFGFLGSASNIPFLSALFQR 124
BLAST of CV884900 vs. ExPASy Swiss-Prot
Match: GOT1A_MOUSE (Vesicle transport protein GOT1A OS=Mus musculus GN=Golt1a PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.240e-16 Identity = 45/94 (47.87%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 228 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQ---RIPILGWLFQQ 500 D LLA GN+LF+ G+SL IGL+ T FF +R KGT WP+LGM+LE YGFI LF GF+P + FL IP L LFQ+ Sbjct: 31 DSVLLAFGNLLFLTGLSLIIGLRRTFAFFFQRHKLKGTSFFLGGVAIVLLRWPLLGMLLEAYGFISLFKGFFPVVFGFLGSAFNIPFLSTLFQK 124
BLAST of CV884900 vs. ExPASy Swiss-Prot
Match: GOT1A_HUMAN (Vesicle transport protein GOT1A OS=Homo sapiens GN=GOLT1A PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16 Identity = 45/94 (47.87%), Postives = 54/94 (57.45%), Query Frame = 3 Query: 228 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQ---RIPILGWLFQQ 500 D LLA GN+LF+ G+SL IGL+ T FF +R KGT WP+LGM LETYGF LF GF+P FL IP LG LF++ Sbjct: 31 DSVLLAFGNLLFLTGLSLIIGLRKTFWFFFQRHKLKGTSFLLGGVVIVLLRWPLLGMFLETYGFFSLFKGFFPVAFGFLGNVCNIPFLGALFRR 124
BLAST of CV884900 vs. ExPASy Swiss-Prot
Match: GOT1_CAEEL (Probable Golgi transport protein 1 OS=Caenorhabditis elegans GN=F41C3.4 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14 Identity = 43/132 (32.58%), Postives = 66/132 (50.00%), Query Frame = 3 Query: 132 MVSFEMNDRKKXXXXXXXXXXXXXXXXXXXXXDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 527 M++FE++ K+ D LLA+GN+LFI G++ IG++ T+ FF + + KG+I +P+ GMI E +GFIVLF GF P + L+ IP + + P +R DR Sbjct: 1 MMNFEVSTTKQIGVGLTTFGFFFIFLGVLMFLDSALLAIGNLLFIVGITFIIGVQRTLVFFFEFRKLKGSILFFGGILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSIPGISTITYLPGIRQVLDR 132
BLAST of CV884900 vs. ExPASy Swiss-Prot
Match: GOT1_DICDI (Protein transport protein got1 homolog OS=Dictyostelium discoideum GN=golt1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 33/101 (32.67%), Postives = 58/101 (57.43%), Query Frame = 3 Query: 228 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTI-SXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 527 D+ LLA+GN+L ++G+ L +GL+ T +FF +++ KGTI W +GM++E +GF+ LF +P + L+++PI+G + P V + Sbjct: 29 DRNLLALGNLLLVSGIVLILGLQKTTKFFAQKKKIKGTILFFFGIVVLLVTRWTFVGMVIEIFGFVNLFGDAFPIVISILRKLPIIGNILNHPLVNRLLQK 129
BLAST of CV884900 vs. ExPASy Swiss-Prot
Match: GOT1_YEAST (Protein transport protein GOT1 OS=Saccharomyces cerevisiae GN=GOT1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 228 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDRYRSRRV 545 D+ LLA+GNILF+ GV L IG + T FF + +G++ W LG I+E+ G I LF F+ + FL+ +PI+G + P + D+ RV Sbjct: 30 DRALLALGNILFLIGVFLIIGSQKTYIFFTRPNKRRGSLFFLVGAFLILLKWTFLGFIIESLGIIGLFGDFFGVIVQFLRSMPIIGPILSHPAIAPIVDKLAGVRV 135 The following BLAST results are available for this feature:
BLAST of CV884900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884900 ID=CV884900; Name=CV884900; organism=Citrus sinensis; type=EST; length=712bpback to top |