CV884870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 3.096e-112 Identity = 200/225 (88.89%), Postives = 212/225 (94.22%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKY 727 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGIL+KDGVVL+GEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYT++YQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK S+LKQDYKDD++RE+AV+LALK LSKTMDSTSLTS+KLELAEV+L+PSGKVKY Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDDVTREDAVKLALKALSKTMDSTSLTSEKLELAEVYLLPSGKVKY 225
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 394.045 bits (1011), Expect = 4.185e-109 Identity = 198/225 (88.00%), Postives = 207/225 (92.00%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKY 727 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVL+GEKKVTSKLLQTSTS EKMYKIDDHVACAVAGIMSDANILINTARVQAQRYT+ YQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNYGGWK SILKQDYKDD +REEAV+LALKVL+KTMDSTSLTS+KLELAEV+L PS VKY Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVKY 225
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 1.346e-107 Identity = 198/225 (88.00%), Postives = 208/225 (92.44%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKY 727 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGI SKDGVVLVGEKKVTSKLLQTSTS+EKMYKIDDHVACAVAGIMSDANILINTARVQAQRYT++YQEPMPVEQLVQSLCDTKQGYTQ+GGL PFGVSFLFAGWDKN+GFQL+MSDPSGNY GWK S+LKQDYKDDI+REEAVQLALKVLSKTMDSTSLTS+KLELAEVFL +GKVKY Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFL-SNGKVKY 224
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 7.155e-101 Identity = 183/226 (80.97%), Postives = 202/226 (89.38%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKY 727 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSA+G+L+ DGVVLVGEKKVTSKLLQTS S EKMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWK S+LKQDY+D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+Y Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQY 226
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 7.155e-101 Identity = 183/226 (80.97%), Postives = 202/226 (89.38%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKY 727 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSA+G+L+ DGVVLVGEKKVTSKLLQTS S EKMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWK S+LKQDY+D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+Y Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQY 226
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 366.311 bits (939), Expect = 9.344e-101 Identity = 183/226 (80.97%), Postives = 202/226 (89.38%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKY 727 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSA+G+L+ DGVVLVGEKKVTSKLLQTS S EKMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWK S+LKQDY+D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+Y Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQY 226
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2) HSP 1 Score: 366.311 bits (939), Expect = 9.344e-101 Identity = 183/226 (80.97%), Postives = 202/226 (89.38%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMP-SGKVKY 727 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSA+G+L+ DGVVLVGEKKVTSKLLQTS S EKMYKID H+ACAVAGIMSDANIL+NTAR+ AQRY +YQEP+PVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK++GFQLYMSDPSGNY GWK S+LKQDY+D ++REEAV LALKVLSKTMDSTSLT++KLELAEVFL P +G+V+Y Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQY 226
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 5.331e-80 Identity = 145/215 (67.44%), Postives = 177/215 (82.33%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTS-TEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK-XXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELA 691 M+RRYD RTTIFSPEGR+YQVEYAM AI +AG+ +GIL+KDG+VL EKK T+KLL +STS +EKM+KID+HV CAVAGI SDANILIN AR+ +QR+ Y YQEPMPVEQLV +CDTKQGYTQ+GGLRPFGVSFL+AGWD++YGFQLY SDPSGN+ GWK S+L+ +YK DIS +EA+QLALKVL+KTMD +++ S+KLE + Sbjct: 1 MARRYDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYKPDISLKEALQLALKVLTKTMDRSNINSEKLEFS 215
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 8.243e-73 Identity = 132/214 (61.68%), Postives = 167/214 (78.04%), Query Frame = 2 Query: 56 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 SRRYDSRTTIFSPEGRLYQVEYA+E+I +AG+AIGI++ DG+VL E+KVTS LL+ TSTEK+YK++D +A AVAG+ +DA ILINTAR+ AQ Y Y E +PVE LV+ L D KQGYTQ GGLRPFGVSF++AG+D YG+QLY S+PSGNY GWK ++L+ DYKDD+ ++A++LALK LSKT DS++LT D+LE A + Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATI 216
BLAST of CV884870 vs. ExPASy Swiss-Prot
Match: PSA4_SCHPO (Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces pombe GN=SPAC13C5.01c PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.132e-72 Identity = 131/215 (60.93%), Postives = 165/215 (76.74%), Query Frame = 2 Query: 53 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 697 MSR YDSRTTIFSPEGRLYQVEYA+EAI +AG A+GI++KDG+VL EKKVTSKLL+ S EK+Y I D++ CAVAG+ +DANILIN AR Q+Y + E MP EQLV+ +CD KQGYTQ+GGLRPFGVSFL+AGWD G+QL+ S+PSGNYG W+ S+++Q+YKDDI+ +EA +A+K LSKT+DS SLT +K+E A + Sbjct: 1 MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMAVKFLSKTLDSNSLTHEKIEFATI 215 The following BLAST results are available for this feature:
BLAST of CV884870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884870 ID=CV884870; Name=CV884870; organism=Citrus sinensis; type=EST; length=727bpback to top |