CV884855

Overview
NameCV884855
Unique NameCV884855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:761..1671. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.314e-87
Identity = 160/164 (97.56%), Postives = 162/164 (98.78%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKLAYVALDYEQELETAKSSSSVEKNYELPDGQ+ITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  214 IKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT13_SOLTU (Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.314e-87
Identity = 158/164 (96.34%), Postives = 164/164 (100.00%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            MKEKLAYVALDYEQELETAKSSS+VEK+YELPDGQ+ITIGAERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+KGEYDESGPSIVHRKCF
Sbjct:  214 MKEKLAYVALDYEQELETAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIVHRKCF 377
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT12_SOLTU (Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100 PE=3 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.314e-87
Identity = 158/164 (96.34%), Postives = 164/164 (100.00%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            MKEKLAYVALDYEQELETAKSSS+VEK+YELPDGQ+ITIGAERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+KGEYDESGPSIVHRKCF
Sbjct:  194 MKEKLAYVALDYEQELETAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIVHRKCF 357
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.928e-87
Identity = 158/164 (96.34%), Postives = 163/164 (99.39%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKLAY+ALDYEQELETAKSSSSVEK+YELPDGQ+ITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF
Sbjct:  214 IKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 2.928e-87
Identity = 158/164 (96.34%), Postives = 163/164 (99.39%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKLAY+ALDYEQELETAKSSSSVEK+YELPDGQ+ITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF
Sbjct:  214 IKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT1_PEA (Actin-1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 6.522e-87
Identity = 157/164 (95.73%), Postives = 162/164 (98.78%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKLAYVALDYEQELETAKSSSS+EKNYELPDGQ+ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISK EYDE GPSIVHRKCF
Sbjct:  213 IKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT2_PEA (Actin-2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.453e-86
Identity = 156/164 (95.12%), Postives = 162/164 (98.78%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKLAYVALDYEQELETAKSSSS+EKNYELPDGQ+ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPER+YSVWIGGSILASLSTFQQMWISK EYDE GPSIVHRKCF
Sbjct:  213 IKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERRYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT11_SOLTU (Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 7.211e-86
Identity = 154/164 (93.90%), Postives = 163/164 (99.39%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKLAY+ALDYEQELET+K+SSSVEK+YELPDGQ+ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  214 VKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 9.418e-86
Identity = 153/164 (93.29%), Postives = 163/164 (99.39%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKLAY+ALDYEQELET+K+SSS+EK+YELPDGQ+ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  214 VKEKLAYIALDYEQELETSKTSSSIEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSJ (Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.230e-85
Identity = 155/164 (94.51%), Postives = 162/164 (98.78%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKLAYVALDYEQELETAKSSSSVEK+YELPDGQ+ITIGAERFRCPEV+FQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct:  214 IKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
The following BLAST results are available for this feature:
BLAST of CV884855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ACT7_ARATH1.314e-8797.56Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]
ACT13_SOLTU1.314e-8796.34Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1[more]
ACT12_SOLTU1.314e-8796.34Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100... [more]
ACT3_ORYSJ2.928e-8796.34Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE... [more]
ACT3_ORYSI2.928e-8796.34Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2... [more]
ACT1_PEA6.522e-8795.73Actin-1 OS=Pisum sativum PE=2 SV=1[more]
ACT2_PEA1.453e-8695.12Actin-2 OS=Pisum sativum PE=2 SV=1[more]
ACT11_SOLTU7.211e-8693.90Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1[more]
ACT_GOSHI9.418e-8693.29Actin OS=Gossypium hirsutum PE=3 SV=1[more]
ACT2_ORYSJ1.230e-8594.51Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011A06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884855 ID=CV884855; Name=CV884855; organism=Citrus sinensis; type=EST; length=911bp
TTTTTTTATTAAAGTTTTCTCATACAATAGCTATTAACATTAATGTTCCT
TTTGAGAGGGGGAGAAAAAAAACCTTCAAATATGAAAATTTAGAAAATGA
AATAGAAAAGCATCACAACCACTCTTCATCTCCAGCTACAAACATCCTAC
TTAAAATAAAAAAAAGGAAAAAAAAGAAAAAAGACTTGGTTGAACACCAG
ATGAATGCAAGGCAAGGAAGATGGTTGAGTACAGAAATAAGCCCCCCTCA
AACGCTGTAAGAAGCTTGTATAATAACATCAATATCGAGATATGCCTCCT
TCAATGGCCCCATCCTTAGCACTTCTCCATGTCAACCAACTTGAGTTCGC
GAAACGAGACACAAAAAACCAACTAAATGGAAAAAAAGAACTCACCCATC
AAGCACTTAAAGAACTTAGAAGCATTTCCTGTGGACAATGGATGGACCAG
ACTCATCATACTCGCCCTTTGAGATCCACATCTGCTGGAAGGTGCTGAGG
GATGCAAGGATTGATCCTCCAATCCAAACACTGTATTTTCTCTCTGGTGG
AGCCACGACCTTGATCTTCATGCTGCTTGGAGCAAGTGCTGTGATTTCCT
TGCTCATACGGTCGGCAATACCAGGGAACATAGTTGAACCCCCACTGAGA
ACAATGTTACCATACAGATCCTTTCTAATATCCACATCACACTTCATGAT
GGAGTTGTAGGTAGTCTCATGAATACCAGCAGCTTCCATTCCGATGAGAG
ATGGCTGGAACAGAACTTCTGGGCAACGGAATCTTTCAGCTCCAATGGTG
ATGATCTGGCCATCAGGCAGCTCATAGTTCTTCTCAACAGATGAGCTGCT
CTTGGCAGTCTCAAGTTCTTGCTCATAGTCTAGGGCAACATAAGCAAGCT
TCTCCTTCATG
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