EY665314

Overview
NameEY665314
Unique NameEY665314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665314 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.672e-50
Identity = 96/139 (69.06%), Postives = 115/139 (82.73%), Query Frame = 2
Query:    2 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 418
            TSIIHGKY HEETVAT+SFAG Y++V N+KEA+YVCDYIL G        K+ FLEKFK A S+GFDPD DL+++GIANQTTMLK ETE+IGKL E TM++K+G   +NEHF+SFNTICDATQERQDAM  +VEE+VD+
Sbjct:  176 TSIIHGKYKHEETVATSSFAGTYLVVLNLKEAQYVCDYILNG------GNKDEFLEKFKNAHSEGFDPDKDLIRLGIANQTTMLKSETEQIGKLFETTMLKKYGPTELNEHFMSFNTICDATQERQDAMLNLVEEEVDV 308          
BLAST of EY665314 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.865e-49
Identity = 95/139 (68.35%), Postives = 115/139 (82.73%), Query Frame = 2
Query:    2 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 418
            TSIIHGKY+HEET+AT+SFAG Y+IV N++EA YVCDYIL G        + AF+ KF KA S GFDPD DLV+VGIANQTTMLKGETE+IGKL E+TM++K+G + +NEHF+SFNTICDATQERQDAM  +V+E +DL
Sbjct:  176 TSIIHGKYNHEETIATSSFAGTYLIVLNLEEARYVCDYILHG------GDRAAFMAKFAKACSPGFDPDRDLVRVGIANQTTMLKGETEQIGKLFERTMIQKYGPDRLNEHFMSFNTICDATQERQDAMLSLVKEPLDL 308          

HSP 2 Score: 23.0978 bits (48), Expect = 1.865e-49
Identity = 10/33 (30.30%), Postives = 18/33 (54.55%), Query Frame = 1
Query:  427 LLVGGTPSNTFTPFKRLQKTVNFPSYWIDSGEK 525
            +++GG  S+  T  + +      PSY IDS ++
Sbjct:  310 VVIGGYNSSNTTHLQEIAIEHGIPSYHIDSADR 342          
BLAST of EY665314 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.865e-49
Identity = 95/141 (67.38%), Postives = 114/141 (80.85%), Query Frame = 2
Query:    2 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLYL 424
            TSIIHGKY HEET+AT+SFAGKY+IV N+KEA+YV DYIL G        +E FL+KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL E TM++K+G   +N+HF SFNTICDATQERQDAM ++V+E +DL +
Sbjct:  176 TSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYVADYILHGR------NREEFLQKFAKACSAGFDPDKDLERVGIANQTTMLKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMI 310          

HSP 2 Score: 25.0238 bits (53), Expect = 1.865e-49
Identity = 11/36 (30.56%), Postives = 21/36 (58.33%), Query Frame = 1
Query:  427 LLVGGTPSNTFTPFKRLQKTVNFPSYWIDSGEKNRS 534
            +++GG  S+  T  +++ +    PSY ID  E+ +S
Sbjct:  310 IVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKS 345          
BLAST of EY665314 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.431e-49
Identity = 95/141 (67.38%), Postives = 114/141 (80.85%), Query Frame = 2
Query:    2 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLYL 424
            TSIIHGKY HEET+AT+SFAGKY+IV N+KEA+YV DYIL G        +E FL+KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL E TM++K+G   +N+HF SFNTICDATQERQDAM ++V+E +DL +
Sbjct:  176 TSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYVADYILHG------GNREEFLQKFAKACSAGFDPDRDLERVGIANQTTMLKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMI 310          

HSP 2 Score: 25.0238 bits (53), Expect = 2.431e-49
Identity = 11/36 (30.56%), Postives = 21/36 (58.33%), Query Frame = 1
Query:  427 LLVGGTPSNTFTPFKRLQKTVNFPSYWIDSGEKNRS 534
            +++GG  S+  T  +++ +    PSY ID  E+ +S
Sbjct:  310 IVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKS 345          
BLAST of EY665314 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.129e-49
Identity = 93/139 (66.91%), Postives = 114/139 (82.01%), Query Frame = 2
Query:    2 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 418
            TSIIHGKY HEET+AT+S+A  Y+IV ++KEAEYVC+YIL G        +E FL KF+ A S  FDPD DLV+VGIANQTTMLKGETE+IGKL E+T+MRK+G + +N+HF+SFNTICDATQERQDAM+K+VE  +DL
Sbjct:  177 TSIIHGKYQHEETIATSSYAATYLIVLDLKEAEYVCNYILNG------GDREEFLHKFRHAYSPDFDPDRDLVRVGIANQTTMLKGETEQIGKLFERTLMRKYGPDQINQHFLSFNTICDATQERQDAMFKLVEYPLDL 309          

HSP 2 Score: 23.483 bits (49), Expect = 4.129e-49
Identity = 10/33 (30.30%), Postives = 18/33 (54.55%), Query Frame = 1
Query:  427 LLVGGTPSNTFTPFKRLQKTVNFPSYWIDSGEK 525
            +++GG  S+  T  + +      PSY IDS ++
Sbjct:  311 VVIGGFNSSNTTHLQEISIEREIPSYHIDSADR 343          
BLAST of EY665314 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7424) GN=ispH PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.123e-48
Identity = 95/139 (68.35%), Postives = 114/139 (82.01%), Query Frame = 2
Query:    2 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 418
            TSIIHGKY HEETVAT+SFAG Y++V NM++A+YVC+YIL G        K+ FL KFKKA S+GFDPD DL +VGIANQTTMLK ETEEIGKL E TM++K+G  ++N HF+SFNTICDATQERQDAM  +V+EK+DL
Sbjct:  176 TSIIHGKYKHEETVATSSFAGTYLVVLNMEQAKYVCNYILNG------GDKQEFLAKFKKAYSEGFDPDTDLERVGIANQTTMLKSETEEIGKLFEHTMLKKYGPLDLNNHFMSFNTICDATQERQDAMLDLVKEKLDL 308          
BLAST of EY665314 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP8 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 8801) GN=ispH PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.466e-48
Identity = 95/139 (68.35%), Postives = 113/139 (81.29%), Query Frame = 2
Query:    2 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 418
            TSIIHGKY HEETVAT+SFAG Y++V N+++A YVCDYIL G        KE FL KFK A S+GFDPD DL KVGIANQTTMLK ETE+IGKL E TM++K+G   +N+HF+SFNTICDATQERQDAM ++V+EK+DL
Sbjct:  176 TSIIHGKYRHEETVATSSFAGTYLVVLNLEQATYVCDYILKG------GNKEEFLAKFKNAYSEGFDPDTDLEKVGIANQTTMLKSETEQIGKLFEGTMLKKYGPAVINDHFMSFNTICDATQERQDAMLELVKEKLDL 308          
BLAST of EY665314 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP2 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ispH PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.024e-48
Identity = 89/139 (64.03%), Postives = 113/139 (81.29%), Query Frame = 2
Query:    2 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 418
            TSIIHGKY HEETVAT+SFAG Y+++ N++EAEYV +YIL G        ++ FL+KFK A S+GFDPD DL +VG+ANQTTMLK ETE++GKL E+TM+ KFG   +N+HF+SFNTICDATQERQDAM+ +VE+ +DL
Sbjct:  176 TSIIHGKYKHEETVATSSFAGTYLVLLNLEEAEYVRNYILHG------GDRQTFLDKFKNAYSEGFDPDKDLDRVGVANQTTMLKSETEQMGKLFEQTMLEKFGPTEINDHFMSFNTICDATQERQDAMFDLVEKDLDL 308          

HSP 2 Score: 28.8758 bits (63), Expect = 2.024e-48
Identity = 16/44 (36.36%), Postives = 25/44 (56.82%), Query Frame = 1
Query:  427 LLVGGTPSNTFTPFKRLQKTVNFPSYWIDSGEKNRSRKNKIAYK 558
            +++GG  S+  T  + +    N PSY IDSG++     N IA+K
Sbjct:  310 VVIGGFNSSNTTHLQEIAVERNIPSYHIDSGDRLLG-NNVIAHK 352          
BLAST of EY665314 vs. ExPASy Swiss-Prot
Match: ISPH_ACAM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=ispH PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.685e-47
Identity = 91/141 (64.54%), Postives = 114/141 (80.85%), Query Frame = 2
Query:    2 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILG-GELNGSSSTKEA-FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 418
            TSIIHGKY HEET+AT+SFAG Y+++ N++EAEYV DYIL  G+       + A F+ KF  A S GFDP+ DL +VGIANQTTMLKGETE+IGKL E+T+MRK+G   VNEHF+SFNTICDATQERQDA++++V+E +DL
Sbjct:  177 TSIIHGKYKHEETIATSSFAGTYLVLLNLEEAEYVADYILNPGDTPSEREQRRADFMAKFANAHSPGFDPETDLERVGIANQTTMLKGETEQIGKLFERTVMRKYGPAQVNEHFLSFNTICDATQERQDAIFQLVDEPLDL 317          

HSP 2 Score: 25.0238 bits (53), Expect = 1.685e-47
Identity = 11/33 (33.33%), Postives = 19/33 (57.58%), Query Frame = 1
Query:  427 LLVGGTPSNTFTPFKRLQKTVNFPSYWIDSGEK 525
            +++GG  S+  T  + +    N PSY IDS ++
Sbjct:  319 VVIGGFNSSNTTHLQEISIDKNIPSYHIDSVDR 351          
BLAST of EY665314 vs. ExPASy Swiss-Prot
Match: ISPH_TRIEI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=ispH PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.829e-46
Identity = 89/139 (64.03%), Postives = 111/139 (79.86%), Query Frame = 2
Query:    2 TSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDL 418
            TSIIHGKYSH ET+AT+SFA KY+IV NM +A+YVC+YIL G        ++ FL KFK+A S+GFDPD+DL +VGIANQTTMLK ETEEIGKL E+TMM+K+  + +N H+ +FNTICDATQERQDA+  +  EK+DL
Sbjct:  176 TSIIHGKYSHAETIATSSFADKYLIVLNMTQAQYVCNYILNG------GNRDEFLAKFKQAYSEGFDPDLDLEQVGIANQTTMLKTETEEIGKLFERTMMKKYRPDQLNAHYQNFNTICDATQERQDAIAGLFNEKLDL 308          

HSP 2 Score: 26.9498 bits (58), Expect = 1.829e-46
Identity = 18/54 (33.33%), Postives = 29/54 (53.70%), Query Frame = 1
Query:  427 LLVGGTPSNTFTPFKRLQKTVNFPSYWIDSGEKNRSRKNKIAYK-FGCMVELGE 585
            +++GG  S+  T  + +      PSY ID  ++  SR NKI +K  G  V++ E
Sbjct:  310 VVIGGFNSSNTTHLQEMAIENGIPSYHIDGAQRILSR-NKIEHKPLGREVKISE 362          
The following BLAST results are available for this feature:
BLAST of EY665314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ISPH_CYAA52.672e-5069.064-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_THEEB1.865e-4968.354-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ANAVT1.865e-4967.384-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ANASP2.431e-4967.384-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAP44.129e-4966.914-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAP71.123e-4868.354-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAP81.466e-4868.354-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNP22.024e-4864.034-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ACAM11.685e-4764.544-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_TRIEI1.829e-4664.034-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665314 ID=EY665314; Name=EY665314; organism=Citrus sinensis; type=EST; length=1046bp
CACTTCAATTATTCACGGTAAATATTCTCATGAGGAAACTGTAGCAACTG
CATCGTTTGCAGGAAAGTATATCATAGTCAAGAATATGAAAGAGGCTGAG
TATGTGTGTGATTACATTCTTGGGGGTGAACTTAATGGATCTAGCTCAAC
AAAAGAAGCATTCCTTGAGAAATTCAAGAAAGCTGTTTCAAAAGGGTTTG
ATCCAGATGTTGACCTGGTAAAAGTTGGCATTGCAAACCAAACTACAATG
CTCAAGGGTGAAACAGAAGAGATTGGAAAACTAGTCGAGAAGACCATGAT
GCGTAAATTTGGAGTTGAAAATGTCAATGAACACTTCATAAGCTTCAACA
CAATTTGTGATGCTACACAAGAGCGACAAGATGCAATGTATAAGATGGTT
GAGGAAAAGGTCGATCTTTATCTTGGTTGTTGGTGGGTGGAACTCCGAGC
AATACCTTCACACCCTTCAAGAGATTGCAAAAGACCGTGAATTTTCCCTC
ATACTGGATCGATAGTGGAGAAAAAAATAGGTCCCGGAAAAACAAAATAG
CATATAAATTTGGATGCATGGTGGAGCTGGGGGAAAAAAAAAAAAAATTT
GGGCTGGCCCGAAAAGGCCAAAAAATTAAAATCCGGAAAAACATTCCGGG
GGCCCCCCACCCCCCCAAAAAAGGGCTGGTTGAAAAAAACTCCCTTTAAA
AGGGTATTTTAAAAATCCAAGCGGGGGAAAAAAACCTTTGGCATTATAAC
CGAAAAAATGGAAGGCCCAAAACAATACCACTTTAACCAATTAATTTTTC
CAATGGGGGGTTGTGAACCCACTAAAAAATATTGGGAAAAATTTTTATAA
AACCCACCCCCCCCCCGGCCGGGGGCTCTTTTTTACAAGGGGCCCCCGTG
GAATTACCGAAAAATATTTTTATTTTTTTTTTTTGGGGGACAAAATAAAG
AAAACACTAAAGAAAAATTATTAAAATTTTTTTTTAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAGAGGGGGAGGGGGCGCGCCCCGGCGTCGCAC
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