CV884717

Overview
NameCV884717
Unique NameCV884717
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884717 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.859e-13
Identity = 44/103 (42.72%), Postives = 53/103 (51.46%), Query Frame = -3 
Query:  279 CTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTVXXXXXXXXXXXXXXXXXXXXXXXXXXXGRNTTTPKTSPYTPDLSSGANFSPFVALGIT 587
            CT GN+I++DS+GATTI LK AG HYFICGVPGH   GMKL++ V                              TTT  T+P   + SS  + SP VAL  T
Sbjct:   78 CTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSGSSAAPSATPSSSGKGSPSSDDTPAATTT-TTTPTKQNESSATSLSPIVALFFT 179
The following BLAST results are available for this feature:
BLAST of CV884717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BCP_PEA2.859e-1342.72Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884717 ID=CV884717; Name=CV884717; organism=Citrus sinensis; type=EST; length=589bp
TTTTTTTTTTTTTTTTTGGCAAACAAAAGTGAGAATTTGATTCATAATAT
TAAGGATCAAATCCCCTGTGATTGTGAACAGAAAAGCTATGGCCCTATAA
TAATAACACACGCATATTTTTTTTTTGTTTTTCAAGGAAACAACCTACTA
ATTGATAAAACCAGGCCTCATGAATACAAACTAGAAATGCATAACGTAAA
GGAGAAAAAGCACTGCCTCTATCCTGGGCATCAGCAAGGAGAAGCTTATG
AGAGAACCAACATGAAGAATGCAACACAAGTAATTCCTAGAGCAACAAAT
GGAGAGAAATTAGCCCCCGAAGATAAATCAGGGGTATAAGGTGAAGTTTT
GGGGGTTGTCGTATTGCGGCCAGAAGGCAGCGAAAAACCGCCAGAACCCC
CTGTAGATGATGAACCTGAACCTGATGGAGAAGCGGTTGGTGACCCTGAT
CCCACAGTGACGGCAAGCTTCATGCCGCTGCCGCAGTGACCAGGGACACC
ACAAATGAAGTAGTGTGTCCCGGCAGTCTTTAGAGTGATGGTGGTGGCAC
CTGAACTGTCTGATGTGATTGCATTTCCCACGGTGCATG
back to top