EH406513

Overview
NameEH406513
Unique NameEH406513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EH406513 vs. ExPASy Swiss-Prot
Match: CCI1_ARATH (Cycloeucalenol cycloisomerase OS=Arabidopsis thaliana GN=CPI1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 7.862e-59
Identity = 107/136 (78.68%), Postives = 120/136 (88.24%), Query Frame = 1 
Query:    1 VASNLTLRRIRHSVADLPDKIQLAVEAGWILVLSYFIAYLETLAISNFPYYEFVDRASMYKVGSLFYAIYFIISFPMFLRIDEKLGDLWDLPRVAVDALGAAMLVTIILDLWRIFLGPIVPLPETKLCLQPGLPWF 408
            VASN+TLRR+RHS ADLPD ++   EA WIL LSYFIAYLET+AI+NFPYYEFVDR++MY+VG LFYAIYFI+SFPMF R+DEK  D WDL RVAVDALGAAMLVTIILDLWR+FLGPIVPLPE + CLQ GLPWF
Sbjct:  143 VASNITLRRLRHSTADLPDSLKWCFEAAWILALSYFIAYLETIAIANFPYYEFVDRSAMYRVGCLFYAIYFIVSFPMFFRMDEKSTDEWDLSRVAVDALGAAMLVTIILDLWRLFLGPIVPLPEGQNCLQSGLPWF 278
The following BLAST results are available for this feature:
BLAST of EH406513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CCI1_ARATH7.862e-5978.68Cycloeucalenol cycloisomerase OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2DH03FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406513 ID=EH406513; Name=EH406513; organism=Citrus sinensis; type=EST; length=593bp
GTTGCTTCAAATTTGACACTTCGGAGAATACGGCATTCTGTTGCTGACTT
GCCAGATAAAATTCAGTTGGCTGTTGAGGCTGGATGGATTTTGGTTCTTT
CTTACTTTATAGCATACCTGGAAACATTAGCCATTTCCAATTTCCCCTAT
TATGAATTCGTGGACCGAGCATCCATGTATAAAGTTGGGTCTTTGTTTTA
TGCCATCTACTTCATTATAAGCTTCCCAATGTTTCTAAGGATTGATGAGA
AACTTGGTGACCTGTGGGACTTACCCCGAGTGGCTGTTGATGCTTTGGGA
GCTGCAATGCTTGTCACAATAATACTTGATTTGTGGCGAATCTTTCTGGG
ACCTATTGTTCCGCTTCCAGAGACGAAGCTGTGTCTACAACCAGGACTCC
CATGGTTTCCAGGACACACCAATCAAACTTGAAAGTATGGACGTGGAGAA
TCCAGGAAGTTTCTACTCAACTGAGAAAACACGCAATGTATCTCTTTCCA
TTGACACTGAGCTCGTAGTTGTGGTTGAACTCTATTAGATCTCTTTTGTA
CTTGCTTTTTCCTGGACATTTAACAAGAATGTGAGTAGTATCT
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