CV884595

Overview
NameCV884595
Unique NameCV884595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:1421..2191. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 6.292e-82
Identity = 150/183 (81.97%), Postives = 164/183 (89.62%), Query Frame = -1
Query:  223 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 771
            VIKPT+LIGSSGVG+ FTKEVIEAMAS NEKPLILALSNPTSQSECTAEEAYTW++GRAIFASGSPFDP EYNGK FVPGQANNAYIFPG G+GLVISGAIRVHD+MLLAASEALA+QVT+ENF+KGLIYPPFSNIR             AYELG+ATRLP+P+NLVK AESCMY+PVYR+YR
Sbjct:  409 VIKPTVLIGSSGVGKAFTKEVIEAMASCNEKPLILALSNPTSQSECTAEEAYTWTQGRAIFASGSPFDPVEYNGKTFVPGQANNAYIFPGLGMGLVISGAIRVHDEMLLAASEALARQVTQENFDKGLIYPPFSNIRKISAHIAANVAAKAYELGLATRLPQPENLVKYAESCMYSPVYRSYR 591          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 288.886 bits (738), Expect = 2.094e-77
Identity = 144/182 (79.12%), Postives = 156/182 (85.71%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            IKP +LIG+SGVG+TFTKEVIEAMASFNEKPLILALSNPTSQSECTA+EAYTW+KG+AIFASGSPFDP EY GKVFVPGQ+NNAYIFPG GLGLVISGAIRVHDDMLLAA+EALA Q+ EE   KGLIYPP SNIR             AYELG+ATRLPRP+NLVK AESCMY+P YR YR
Sbjct:  410 IKPIVLIGTSGVGKTFTKEVIEAMASFNEKPLILALSNPTSQSECTAQEAYTWTKGKAIFASGSPFDPVEYEGKVFVPGQSNNAYIFPGLGLGLVISGAIRVHDDMLLAAAEALAGQIKEEYLAKGLIYPPLSNIRKISVQIAANVAAKAYELGLATRLPRPENLVKHAESCMYSPAYRYYR 591          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.666e-77
Identity = 139/182 (76.37%), Postives = 160/182 (87.91%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            IKPT+LIGSSG G+TFTKEV+EAM+SFNEKP+ILALSNPTSQSECTAE+AYTWS+GR IFASGSPF P EYNGKV+V GQ+NNAYIFPGFGLGL+ISGAIRVHD+MLLAASEALA+QVT+E+F+ GLIYPPF+NIR             AYELG+A+RLP+P+NLV  AESCMY+P YRNYR
Sbjct:  466 IKPTVLIGSSGAGQTFTKEVVEAMSSFNEKPIILALSNPTSQSECTAEQAYTWSEGRTIFASGSPFAPVEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDEMLLAASEALAEQVTQEHFDNGLIYPPFTNIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRNYR 647          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.773e-76
Identity = 140/182 (76.92%), Postives = 158/182 (86.81%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            IKPT+LIGSSG G+TFTKEV+E MAS NEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDP EY GK+FVPGQANNAYIFPGFGLGL++SGAIRV D+MLLAASEALA QV+EEN++KGLIYPPF+NIR             AY+LG+A+ L RP++LVK AESCMY+P YR+YR
Sbjct:  408 IKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLKRPKDLVKYAESCMYSPGYRSYR 589          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 1.773e-76
Identity = 137/182 (75.27%), Postives = 158/182 (86.81%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            IKPT+LIG+SGVG+TFTKEVIEAMASFNE+P+I +LSNPTS SECTAEEAY WS+GRA+FASGSPFDP EYNGK+ VPGQ+NNAYIFPGFGLG+VISGA+RVH+DMLLAASE LA Q T+ENFEKG I+PPF+NIR             AYELG+ATRLP+P++L K AESCMYTPVYR+YR
Sbjct:  458 IKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIAASVAAKAYELGLATRLPQPRDLEKYAESCMYTPVYRSYR 639          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.660e-74
Identity = 134/182 (73.63%), Postives = 156/182 (85.71%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            IKPT+LIG+SGVGRTFTKE+IEAM+SFNE+P+I +LSNPTS SECTAE+AYTWS+GR+IFASGSPF P EY GK FVPGQ+NNAYIFPG GLGLVISGA+RVH+DMLLAAS+ALA Q T++NFEKG I+PPF++IR             AYELG+ATRLP P +LVK AE+CMYTPVYRNYR
Sbjct:  455 IKPTVLIGTSGVGRTFTKEIIEAMSSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFASGSPFAPVEYEGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASKALADQATQDNFEKGSIFPPFTSIRKISAHIAAAVAGKAYELGLATRLPPPSDLVKYAENCMYTPVYRNYR 636          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.831e-74
Identity = 135/182 (74.18%), Postives = 158/182 (86.81%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            I+PT+LIGSSG G+TFTKEV+E M+S NEKP+ILALSNPTSQSECTAE+AYTWS+GRAIFASGSPF P EYNGK++V GQANNAYIFPGFGLGL+ISGAIRVHDDMLLAASEA A+QVT+E+F+KGLI+PPF++IR             AYELG+A+RLP+P+NLV  AESCMY+P YR YR
Sbjct:  467 IRPTVLIGSSGTGQTFTKEVVETMSSLNEKPIILALSNPTSQSECTAEQAYTWSEGRAIFASGSPFKPVEYNGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRIYR 648          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.405e-73
Identity = 137/182 (75.27%), Postives = 155/182 (85.16%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            IKPT+LIGSSG GRTFTKEV++AMA+FNEKP+I ALSNPTSQSECTAEEAY+WS+GRAIFASGSPF P EYNGKV+  GQANNAYIFPGFGLGL+ISGAIRVHDDMLL ASEALA +V++ENFEKG   PPFSNIR             AYELG+ATRLP+P++LV  AESCMY+P YR+YR
Sbjct:  393 IKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLVASEALADEVSQENFEKGTHIPPFSNIR-KISAHIAKVAAKAYELGLATRLPQPKDLVAYAESCMYSPAYRSYR 573          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.088e-73
Identity = 135/182 (74.18%), Postives = 152/182 (83.52%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            IKPT+LIG+SG G+ FTKEV+EAMA+ N KPLILALSNPTSQSECTAEEAYTWS+G AIFASGSPFDP EY G+ FVPGQANNAYIFPGFGLGL++ GAIRVHDDMLLAASEALA QVT E+F KGLIYPPF +IR             AYELG+A+RLP+P +LVK AESCMY P YR++R
Sbjct:  404 IKPTVLIGTSGKGKQFTKEVVEAMANINAKPLILALSNPTSQSECTAEEAYTWSQGHAIFASGSPFDPVEYEGRTFVPGQANNAYIFPGFGLGLIMCGAIRVHDDMLLAASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAAGVAAKAYELGLASRLPQPADLVKFAESCMYNPTYRSFR 585          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.282e-42
Identity = 89/178 (50.00%), Postives = 112/178 (62.92%), Query Frame = -1
Query:  235 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVY 768
            +KPT +IG SG+G +F++EVIE MA   EKP++ ALSNPT+ +ECTAE+AY W+ GR IFASGSPF P EY GK FVPGQ NN YIFPG GL   +  A  V D M++ A++ LA  V +     G IYP   +IR             AYE G+A +LPRP N+    +S  Y P Y
Sbjct:  363 VKPTAIIGLSGIGGSFSQEVIEEMAKHVEKPIVFALSNPTTNAECTAEQAYQWTDGRCIFASGSPFKPVEYKGKTFVPGQGNNMYIFPGLGLAASVCEAKHVTDAMIITAAKTLASFVEDSEVLTGKIYPGLQHIREISTRIAVKVIEKAYEEGMA-QLPRPDNIEALVKSRQYVPSY 539          
The following BLAST results are available for this feature:
BLAST of CV884595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_VITVI6.292e-8281.97NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_POPTR2.094e-7779.12NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_FLAPR4.666e-7776.37NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_PHAVU1.773e-7676.92NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_ORYSJ1.773e-7675.27NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_MAIZE1.660e-7473.63NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOC_FLATR2.831e-7474.18NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_SOLLC1.405e-7375.27NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_MESCR4.088e-7374.18NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOX_DICDI1.282e-4250.00NADP-dependent malic enzyme OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884595 ID=CV884595; Name=CV884595; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTTTTTTTAGACCGCAGTAAAAATATCACGAGTATCATGAA
GAATATTCTTCAACCATGTAGGCAGTGGTCCAACACCTTCATTTGATAAG
TACACATATACAGCAATACTTACACAAGTACAAAAGCCACCATAACACAC
CAAAACAAGTTATTTGACATTATTTTTGCTTAAAGACACTCAGCGGAGAC
AGAAATTTTGGCCGAACATTTAACGATAGTTTCGGTAGACAGGGGTATAC
ATGCAACTTTCAGCGCACTTCACCAGATTCTGAGGTCGAGGGAGACGCGT
AGCCACGCCTAGTTCATATGCCTTAGCAGCAACATTAGCAGCTATATTGG
CTGAAATTTTTCTAATATTAGAAAATGGTGGGTAGATCAATCCCTTCTCA
AAGTTCTCTTCTGTCACTTGTTTTGCCAAGGCTTCCGAGGCTGCCAGAAG
CATGTCGTCATGTACCCGAATTGCTCCAGAGATGACCAAACCCAAACCAA
ATCCAGGGAAGATGTAAGCATTGTTGGCCTGGCCAGGAACAAAAACTTTT
CCATTGTATTCAAAAGGATCAAATGGACTTCCACTAGCGAAAATTGCACG
ACCCTTACTCCAAGTGTAAGCTTCTTCAGCTGTACATTCTGACTGTGAGG
TTGGGTTGGAGAGAGCCAGGATGAGAGGTTTCTCATTGAAGGAGGCCATG
GCCTCGATTACTTCTTTTGTAAAAGTTCTTCCAACTCCAGATGATCCAAT
CAAAATTGTTGGCTTGATTAC
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