CV884574

Overview
NameCV884574
Unique NameCV884574
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884574_ssr112 microsatellite CV884574_ssr112:112..126. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CV884574 vs. ExPASy Swiss-Prot
Match: ZPR1_PAPAN (Zinc finger protein ZPR1 OS=Papio anubis GN=ZNF259 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.359e-34
Identity = 74/168 (44.05%), Postives = 109/168 (64.88%), Query Frame = 1
Query:  184 VSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVXXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDDP 687
            +SA+D +    ++ESLCM C  NG+TR LLT IP FR++++S+F C HCG  N E+Q AG +Q +G  Y+L V + +    +R+VVK++SAT +IPELDFEIP  +Q+G+L+TVEG++                    TAE ID+F V+++ L  +V  PF+ I+DDP
Sbjct:   35 ISAEDEEQQPTEIESLCMNCYCNGMTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRVQDQGVRYTLTVRAPED--MNREVVKTDSATTRIPELDFEIPAFSQKGALTTVEGLITRAISGLEQDQPARRANKDATAERIDEFIVKLKEL-KQVASPFTLIIDDP 199          

HSP 2 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 49/171 (28.65%), Postives = 84/171 (49.12%), Query Frame = 1
Query:  178 EAVSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILV-XXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDDP 687
            E    +D    + Q  + C  C     T   L  IPHF++V++ A  C +CG R NEV+  G ++P G   +L +  +D     R ++KSE+ +++IPEL+FE+      G  +T+EG+L                   P   E + +FS +++ ++   ++   FI+DDP
Sbjct:  241 EKPEEEDLRNEVLQFNTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNEVKSGGAVEPLGTRITLHI--TDPSDMTRDLLKSETCSVEIPELEFELGMAVLGGKFTTLEGLLKDIRELVTKNPFTLGDSSNPCQKERLQEFSQKMDQIIEGNMKA-HFIMDDP 408          
BLAST of CV884574 vs. ExPASy Swiss-Prot
Match: ZPR1_BOVIN (Zinc finger protein ZPR1 OS=Bos taurus GN=ZNF259 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.024e-34
Identity = 75/174 (43.10%), Postives = 109/174 (62.64%), Query Frame = 1
Query:  166 GSVVEAVSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVXXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDDP 687
            G +   +SA+D +    ++ESLCM C  NG+TR LLT IP FR++++S+F C HCG  N E+Q AG IQ +G  Y+L V +  Q+   R+VVK++SAT +IPELDFEIP  +Q+G+L+TVEG++                     AE ID+F  +++ L  +V  PF+ I+DDP
Sbjct:   29 GHLFRPISAEDEEQQPTEIESLCMNCYRNGMTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYTLTVRA--QEDMDREVVKTDSATTRIPELDFEIPAFSQKGALTTVEGLISRAISGLEQDQPTRRANEEAVAERIDEFIAKLKEL-KQVASPFTLIIDDP 199          

HSP 2 Score: 84.7297 bits (208), Expect = 4.942e-16
Identity = 48/171 (28.07%), Postives = 84/171 (49.12%), Query Frame = 1
Query:  178 EAVSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILV-XXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDDP 687
            E    +D    + Q  + C  C     T   L  IPHF++V++ A  C +CG R NEV+  G ++P G   +  +  +D     R ++KSE+ +++IPEL+FE+      G  +T+EG+L                   P   E + +FS +++ ++  +++   FI+DDP
Sbjct:  241 EKPEEEDIRNEVLQFNTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNEVKSGGAVEPLGTRITFHI--TDPSDMTRDLLKSETCSVEIPELEFELGMAVLGGKFTTLEGMLKDIRELVTKNPFTLGDSSSPGQTEKLQEFSQKLDQILEGILKA-HFIMDDP 408          
BLAST of CV884574 vs. ExPASy Swiss-Prot
Match: ZPR1_HUMAN (Zinc finger protein ZPR1 OS=Homo sapiens GN=ZNF259 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34
Identity = 74/168 (44.05%), Postives = 108/168 (64.29%), Query Frame = 1
Query:  184 VSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVXXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDDP 687
            +SA+D +    ++ESLCM C  NG+TR LLT IP FR++++S+F C HCG  N E+Q AG IQ +G  Y+L V + +    +R+VVK++SA  +IPELDFEIP  +Q+G+L+TVEG++                    TAE ID+F V+++ L  +V  PF+ I+DDP
Sbjct:   35 ISAEDEEQQPTEIESLCMNCYCNGMTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYTLSVRALED--MNREVVKTDSAATRIPELDFEIPAFSQKGALTTVEGLITRAISGLEQDQPARRANKDATAERIDEFIVKLKEL-KQVASPFTLIIDDP 199          

HSP 2 Score: 84.3445 bits (207), Expect = 6.454e-16
Identity = 49/171 (28.65%), Postives = 84/171 (49.12%), Query Frame = 1
Query:  178 EAVSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILV-XXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDDP 687
            E    +D    + Q  + C  C     T   L  IPHF++V++ A  C +CG R NEV+  G ++P G   +L +  +D     R ++KSE+ +++IPEL+FE+      G  +T+EG+L                   P   E + +FS +++ ++   ++   FI+DDP
Sbjct:  241 EKPEEEDLRNEVLQFSTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNEVKSGGAVEPLGTRITLHI--TDASDMTRDLLKSETCSVEIPELEFELGMAVLGGKFTTLEGLLKDIRELVTKNPFTLGDSSNPGQTERLQEFSQKMDQIIEGNMKA-HFIMDDP 408          
BLAST of CV884574 vs. ExPASy Swiss-Prot
Match: ZPR1_MOUSE (Zinc finger protein ZPR1 OS=Mus musculus GN=Znf259 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33
Identity = 74/174 (42.53%), Postives = 109/174 (62.64%), Query Frame = 1
Query:  166 GSVVEAVSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVXXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDDP 687
            G +   +SA+D +    ++ESLCM C  NG TR LLT IP FR++++S+F C HCG  N E+Q AG IQ +G  Y+L V S  Q+  +R+VVK++SAT +IPELDFEIP  +Q+G+L+TVEG++                     AE ID+F  +++ L  ++  PF+ ++DDP
Sbjct:   29 GPLFRPLSAEDEEQQPTEIESLCMNCYRNGTTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYTLTVRS--QEDMNREVVKTDSATTRIPELDFEIPAFSQKGALTTVEGLISRAISGLEQDQPTRRAVEGAIAERIDEFIGKLKDL-KQMASPFTLVIDDP 199          

HSP 2 Score: 83.1889 bits (204), Expect = 1.438e-15
Identity = 48/171 (28.07%), Postives = 84/171 (49.12%), Query Frame = 1
Query:  178 EAVSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILV-XXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDDP 687
            E    +D    + Q  + C  C     T   L  IPHF++V++ A  C +CG R NEV+  G ++P G   +L +  +D     R ++KSE+ +++IPEL+FE+      G  +T+EG+L                   P  +E + +FS ++  ++   ++   FI++DP
Sbjct:  241 EKAEEEDLRNEVLQFNTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNEVKSGGAVEPLGTRITLHI--TDPSDMTRDLLKSETCSVEIPELEFELGMAVLGGKFTTLEGLLKDIRELVTKNPFTLGDSSNPDQSEKLQEFSQKLGQIIEGKMKA-HFIMNDP 408          
BLAST of CV884574 vs. ExPASy Swiss-Prot
Match: ZPR1_YEAST (Zinc finger protein ZPR1 OS=Saccharomyces cerevisiae GN=ZPR1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.582e-30
Identity = 72/162 (44.44%), Postives = 100/162 (61.73%), Query Frame = 1
Query:  208 PLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVXXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIR--PFSFILDDP 687
            P+ ++ESLCM CG+NG TR LLT IP+FR++++ +F+CPHCG +N E+Q A +IQ +G  Y LKV   +   F+RQV+KSE+AT K  ELD EIP  A+RG L+TVEG+L                      + ID F  +++S +       P +FILDDP
Sbjct:   46 PVQEIESLCMNCGKNGTTRLLLTSIPYFREIIIMSFDCPHCGFKNCEIQPASQIQEKGSRYVLKVECRED--FNRQVIKSETATCKFVELDIEIP--AKRGQLTTVEGLLSEMIDDLSQDQEMRKSIDEALYKKIDDFIQKVKSYINCEPNTIPITFILDDP 203          
BLAST of CV884574 vs. ExPASy Swiss-Prot
Match: ZPR1_SCHPO (Zinc finger protein zpr1 OS=Schizosaccharomyces pombe GN=zpr1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27
Identity = 70/176 (39.77%), Postives = 103/176 (58.52%), Query Frame = 1
Query:  163 VGSVVEAVS-ADDSDAP-LYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVXXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDD 684
            +G+  + VS A+D +   + +VESLCM CG+NG T+ LLT+IP+FR+V+L +FECPHCG +N +VQ A  IQP G   +  V   D++  +R VVKS+ A + IPE+  EIP   + G L+T+EGIL                  P   + I+ F  ++ SL    + PF+  +DD
Sbjct:   13 IGNAAQNVSTAEDREGNGVQEVESLCMECGKNGTTKLLLTVIPYFREVVLMSFECPHCGFKNAQVQHAETIQPEGSKITFHV--EDKEDLNRTVVKSQEAIVSIPEIQLEIP--GRLGQLTTIEGILSNVVDDLSKEQESRKESAPQLYDQINAFIEKVNSLRSGSV-PFTITVDD 183          

HSP 2 Score: 82.4185 bits (202), Expect = 2.453e-15
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 1
Query:  181 AVSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGIL 537
            AV  D ++  ++   + C  C     T   L  IPHF++V++ +  C  CG R+NEV+  GEI P+G   +LKV   D +   R ++KSE+A++KIPEL  ++ P    G  +T+EG+L
Sbjct:  244 AVEVDPNE--VHTFHATCPSCSHQCDTHMKLLDIPHFKEVIIMSTVCDRCGYRSNEVKTGGEIPPKGRKITLKV--MDAEDLSRDILKSETASLKIPELGLDLFPGTLGGRFTTIEGLL 358          
BLAST of CV884574 vs. ExPASy Swiss-Prot
Match: ZPR1_CAEEL (Zinc finger protein ZPR1 homolog OS=Caenorhabditis elegans GN=W03F9.1 PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25
Identity = 62/160 (38.75%), Postives = 89/160 (55.62%), Query Frame = 1
Query:  160 DVGSVVEAVSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVXXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIES 639
            D   +   +SADD +A    V+S+C  C E+G TR + T IP++R V+L +FECPHCG +NNE+Q    +Q  G    L+V   +     RQ+VKSE A+I++PEL  EIP ++Q G ++TVEG+L                  P  A  ID +  +I S
Sbjct:    4 DSQDIYRNLSADDYEAAPIVVDSVCPVCEEDGETRIMCTSIPYYRAVILMSFECPHCGHKNNEIQSGEAVQEHGTLIVLRVQKPED--LRRQLVKSEYASIEVPELQLEIPHKSQPGEVTTVEGVLERVHRGLSQDQEKRRLLDPEGASQIDAYLQKITS 161          

HSP 2 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 48/173 (27.75%), Postives = 82/173 (47.40%), Query Frame = 1
Query:  178 EAVSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVXXXXXXXXXXXXXXXXXPHTAE--AIDQFSVEIESLV-LRVIRPFSFILDDP 687
            E  S +D+   +    + C  C      +   T IP F+ V++ +  C  CG ++NEV+  G I+ +GC  S+K+         R V+K+++  + IPE+D E+   A  G  +T+EG+L                    T E  A+  F  +++ ++ LR+  P + ILDDP
Sbjct:  229 EFKSYEDAKQEVLHFATDCPNCHGPTEVKMKPTDIPFFQTVIIMSLACDRCGYKSNEVKSGGAIRDQGCRMSVKLEKDLD--LARDVLKTDTCALSIPEIDLEVGGNALCGRFTTIEGLLTATKEQLDAQSSFFMGDSAQTGEKSAVTTFLEKLDDIIALRL--PATIILDDP 397          
BLAST of CV884574 vs. ExPASy Swiss-Prot
Match: ZPR1_DICDI (Zinc finger protein ZPR1 homolog OS=Dictyostelium discoideum GN=zpr1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24
Identity = 63/158 (39.87%), Postives = 93/158 (58.86%), Query Frame = 1
Query:  217 QVESLCMRC-GENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVXXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDDP 687
            ++ES C+ C  ENG+TR LLT +P F+++++ AF CP CG R++EV+  G  + +GC+  L V  + +   +RQ+VK E ATI IP LDFEIPP +  GSL+T+EGI+                    + E +  F  ++ +L L V  PF  I+DDP
Sbjct:   33 EIESYCVNCEAENGITRILLTKVPFFKEIMVFAFHCPECGFRSSEVRSGGSYELKGCHIELNV--TKELDLNRQIVKMEKATISIPSLDFEIPP-SNNGSLNTIEGII----KEAITNLTNASEIHTESKEELLGFVSKLSNL-LMVDEPFKIIVDDP 182          

HSP 2 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 51/172 (29.65%), Postives = 87/172 (50.58%), Query Frame = 1
Query:  175 VEAVSADDSDAPLYQVESLCMRCGENGVTRFLLTLIPHFRKVLLSAFECPHCGERNNEVQFAGEIQPRGCNYSLKVPSSDQKMFHRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGIL-VXXXXXXXXXXXXXXXXXPHTAEAIDQFSVEIESLVLRVIRPFSFILDDP 687
            V   S D +D  +Y + + C  CG  G  + +LT IP+F+ +LL AF C  CG + NE++  G I  +G   +L+V S +     R ++KS++A + IPEL+ E+   +  G  +TVEG++ +                 P       + + +++S +    +PF+  LDDP
Sbjct:  242 VSIPSGDLADREVYSLPNQCSYCGVMGECKMVLTDIPYFKSILLMAFSCDECGYKTNEIKPGGAISEKGKTITLRVESVED--LSRDILKSDTANVIIPELEIEVTHGSLGGKFTTVEGLITIIKEELEKNPFFRGDSSDPANRARYQEITSQLDSFIAGK-KPFTIELDDP 410          
The following BLAST results are available for this feature:
BLAST of CV884574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
ZPR1_PAPAN2.359e-3444.05Zinc finger protein ZPR1 OS=Papio anubis GN=ZNF259... [more]
ZPR1_BOVIN4.024e-3443.10Zinc finger protein ZPR1 OS=Bos taurus GN=ZNF259 P... [more]
ZPR1_HUMAN6.864e-3444.05Zinc finger protein ZPR1 OS=Homo sapiens GN=ZNF259... [more]
ZPR1_MOUSE2.608e-3342.53Zinc finger protein ZPR1 OS=Mus musculus GN=Znf259... [more]
ZPR1_YEAST1.582e-3044.44Zinc finger protein ZPR1 OS=Saccharomyces cerevisi... [more]
ZPR1_SCHPO8.127e-2739.77Zinc finger protein zpr1 OS=Schizosaccharomyces po... [more]
ZPR1_CAEEL4.459e-2538.75Zinc finger protein ZPR1 homolog OS=Caenorhabditis... [more]
ZPR1_DICDI4.931e-2439.87Zinc finger protein ZPR1 homolog OS=Dictyostelium ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008C10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884574 ID=CV884574; Name=CV884574; organism=Citrus sinensis; type=EST; length=689bp
TTTATTGGAATTCGGCTTTTCCCGGGTTATTGAAGGTGCTAGGATTGGCT
GATTTGTCGGTGATTTCTTTCGTCTCACTGCTGTCATTTTATTTGGTAAT
AAGAGTTAATTGAGGAGGAGGAGGAGGCTAAAATGGAAAATAACAAAGAA
GAAATAGTTGATGTAGGATCAGTGGTGGAAGCAGTTTCTGCAGATGACTC
TGATGCTCCTCTCTACCAAGTTGAAAGCCTGTGCATGCGTTGCGGTGAAA
ACGGAGTGACAAGGTTTTTATTGACTTTAATTCCTCACTTCAGAAAGGTC
TTGTTGTCAGCTTTTGAGTGTCCGCATTGTGGTGAGAGGAACAATGAGGT
TCAGTTCGCTGGTGAGATCCAACCACGAGGTTGTAATTACAGTTTGAAGG
TTCCTTCAAGCGATCAGAAGATGTTCCACCGCCAAGTAGTGAAATCTGAG
TCTGCCACCATTAAGATTCCTGAACTGGATTTTGAGATTCCTCCTGAGGC
GCAGCGTGGAAGTTTGTCAACTGTGGAGGGGATATTGGTACGAGCAGCGG
ATGAACTGGAGGCCCTTCTAGAAGAACGTAAGAAACTGGATCCTCATACT
GCTGAAGCCATCGACCAGTTTTCTGTTGAAATTGAAAGCCTTGTGCTAAG
GGTGATTCGACCTTTCTCTTTCATCCTCGATGATCCTGC
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