CV884545

Overview
NameCV884545
Unique NameCV884545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:621..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 2.820e-75
Identity = 138/159 (86.79%), Postives = 143/159 (89.94%), Query Frame = -2 
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            HFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNTAKVE GSIVA+FGLGTV            ASR+IGIDID KKFD AKNFGVTEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAAS
Sbjct:  144 HFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 302
[Close]
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 2.820e-75
Identity = 138/159 (86.79%), Postives = 143/159 (89.94%), Query Frame = -2 
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            HFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNTAKVE GSIVA+FGLGTV            ASR+IGIDID KKFD AKNFGVTEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAAS
Sbjct:  144 HFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 302
[Close]
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 1.072e-74
Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = -2 
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            HFMGTSTFSQYTVVHDVSVAKI P APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVA+FGLGTV            ASR+IGIDID  K+D AKNFGVTEF+NPKDH+KPIQQV++DLTDGGVDYSFEC+GNVSVMR+ALECCHKGWGTSVIVGVAAS
Sbjct:  141 HFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAAS 299
[Close]
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 2.387e-74
Identity = 135/159 (84.91%), Postives = 141/159 (88.68%), Query Frame = -2 
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            HFMGTSTFSQYTVVHDVSVAKIDP APLDKVCLLGCGVPTGLGAVWNTAKVEPGS VA+FGLGTV            ASR+IGIDID KK++ AK FGV EFVNPKDHDKPIQ+V+VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS
Sbjct:  142 HFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
[Close]
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 5.318e-74
Identity = 138/159 (86.79%), Postives = 142/159 (89.31%), Query Frame = -2 
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            HFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTGLGAVWNTAKVE GS+VAVFGLGTV            ASRVIGIDID KKFD AKNFGVTEFVNPK+HDKPIQQVLVDLTDGGVDYSFECIGNVS+MRAALEC  KGWGTSVIVGVAAS
Sbjct:  144 HFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAAS 302
[Close]
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 1.775e-61
Identity = 110/159 (69.18%), Postives = 129/159 (81.13%), Query Frame = -2 
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            HFMGTSTFS+YTVV D+S+AK++ +AP+DKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V            A+R+IGID++P KF+ AK FG TEFVNPKDH KPIQ+VLV++TDGGVDYSFECIGNV +MRAALE CHKGWG SVI+GVA +
Sbjct:  141 HFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDHSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGA 299
[Close]
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 232.646 bits (592), Expect = 6.743e-61
Identity = 112/159 (70.44%), Postives = 128/159 (80.50%), Query Frame = -2 
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA  NTAK+EPGS+ AVFGLG V            ASR+IG+DI+  KF RAK FG TE +NP+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAAS
Sbjct:  139 HYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS 297
[Close]
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 5.709e-60
Identity = 111/159 (69.81%), Postives = 127/159 (79.87%), Query Frame = -2 
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCGV TG GA  NTAKVEPGS  A+FGLG V            ASR+IG+DI+  KF +AK FG +E +NP+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAAS
Sbjct:  139 HYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS 297
[Close]
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 5.709e-60
Identity = 106/159 (66.67%), Postives = 128/159 (80.50%), Query Frame = -2 
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            HFMGTSTFS+YTVV D+S+A +DP+APLDKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V            A+R+IG+DI+P+KF +A  FG TE +NPKDH +P+Q+VLV++TDGGVDYSFECIGNV +MR+ALE CHKGWG SVI+GVA +
Sbjct:  140 HFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIGVAGA 298
[Close]
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 2.169e-59
Identity = 110/159 (69.18%), Postives = 126/159 (79.25%), Query Frame = -2 
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA  N AKVEPGS  AVFGLG V            A+R+IG+DI+  KF RAK FG +E +NP+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAAS
Sbjct:  139 HYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAAS 297
The following BLAST results are available for this feature:
BLAST of CV884545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
ADHX_ORYSJ2.820e-7586.79Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI2.820e-7586.79Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_PEA1.072e-7483.65Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_ARATH2.387e-7484.91Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_MAIZE5.318e-7486.79Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_SPAAU1.775e-6169.18Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_HUMAN6.743e-6170.44Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_HORSE5.709e-6069.81Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHH_GADMO5.709e-6066.67Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_BOVIN2.169e-5969.18Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008B05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884545 ID=CV884545; Name=CV884545; organism=Citrus sinensis; type=EST; length=478bp
TGATGCAGCAACACCCACAATAACTGATGTTCCCCAGCCCTTGTGACAGC
ATTCCAAAGCTGCCCTCATCACAGAGACATTGCCAATGCATTCAAAACTA
TAGTCAACACCACCATCCGTGAGATCGACAAGGACCTGCTGAATGGGTTT
GTCATGGTCCTTGGGATTTACAAATTCAGTAACTCCAAAATTCTTTGCTC
TATCAAACTTTTTTGGGTCAATATCTATACCAATAACACGTGAAGCTCCA
GCTGCCTTTGCACCCTCTGCCACAGCAAGGCCAACAGTCCCAAGGCCAAA
AACAGCAACTATAGAACCCGGCTCTACTTTTGCAGTGTTCCAAACTGCTC
CAAGACCAGTAGGAACACCACAGCCAAGAAGGCATACTTTGTCCAAAGGA
GCTTGTGGGTCAATCTTTGCAACACTAACATCATGCACAACTGTGTACTG
GCTAAATGTTGAGGTTCCCATGAAGTGA
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