CV884530

Overview
NameCV884530
Unique NameCV884530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884530 vs. ExPASy Swiss-Prot
Match: ACLY_MOUSE (ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.794e-41
Identity = 83/169 (49.11%), Postives = 110/169 (65.09%), Query Frame = -1
Query:  248 SFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEGEVLQYARVVIDCATADPDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMPLYVRRGGPNSQRALAKMRALAEEIALPIEVYGPEATMTGICKQAI 754
            ++I DLD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG  +EL NY EYSGAP+E +   YA+ ++   T +     + L+IGG IANFT+VAATF GI++             + ++VRRGGPN Q  L  M  + +   +PI V+G E  MT I   A+
Sbjct:  251 AYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419          
BLAST of CV884530 vs. ExPASy Swiss-Prot
Match: ACLY_SHEEP (ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.343e-41
Identity = 86/171 (50.29%), Postives = 113/171 (66.08%), Query Frame = -1
Query:  248 SFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEGEVLQYARVVIDCATAD--PDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMPLYVRRGGPNSQRALAKMRALAEEIALPIEVYGPEATMTGICKQAI 754
            ++I DLD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG  +EL NY EYSGAP+E +   YA+ ++   T +  PDG  + L+IGG IANFT+VAATF GI++             + ++VRRGGPN Q  L  M  + +   +PI V+G E  MT I   A+
Sbjct:  251 AYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419          
BLAST of CV884530 vs. ExPASy Swiss-Prot
Match: ACLY_HUMAN (ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 2.343e-41
Identity = 86/171 (50.29%), Postives = 113/171 (66.08%), Query Frame = -1
Query:  248 SFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEGEVLQYARVVIDCATAD--PDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMPLYVRRGGPNSQRALAKMRALAEEIALPIEVYGPEATMTGICKQAI 754
            ++I DLD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG  +EL NY EYSGAP+E +   YA+ ++   T +  PDG  + L+IGG IANFT+VAATF GI++             + ++VRRGGPN Q  L  M  + +   +PI V+G E  MT I   A+
Sbjct:  251 AYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419          
BLAST of CV884530 vs. ExPASy Swiss-Prot
Match: ACLY_BOVIN (ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.343e-41
Identity = 86/171 (50.29%), Postives = 113/171 (66.08%), Query Frame = -1
Query:  248 SFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEGEVLQYARVVIDCATAD--PDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMPLYVRRGGPNSQRALAKMRALAEEIALPIEVYGPEATMTGICKQAI 754
            ++I DLD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG  +EL NY EYSGAP+E +   YA+ ++   T +  PDG  + L+IGG IANFT+VAATF GI++             + ++VRRGGPN Q  L  M  + +   +PI V+G E  MT I   A+
Sbjct:  251 AYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419          
BLAST of CV884530 vs. ExPASy Swiss-Prot
Match: ACLY_CAEEL (Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.061e-41
Identity = 85/171 (49.71%), Postives = 114/171 (66.67%), Query Frame = -1
Query:  248 FIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEGEVLQYARVVIDC---ATADPDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMPLYVRRGGPNSQRALAKMRALAEEIALPIEVYGPEATMTGICKQAI 751
            +I ++D KT ASLK T+LN KGR+WTMVAGGGASV++ DTV DLG ASEL NY EYSG P+E +  +YA+ ++      T  PDG  + L+IGG IANFT+VA TF GI++            ++ ++VRRGGPN Q  L +++  A ++ LPI V+GPE  MT I   A+
Sbjct:  263 YISEMDAKTGASLKLTILNRKGRVWTMVAGGGASVVFTDTVCDLGGASELANYGEYSGDPSESQTYEYAKTLLSVMTEGTPRPDG--KVLIIGGSIANFTNVAKTFGGIVRAFETFVSKLKEHKVTIFVRRGGPNYQEGLRRIKDAATKLELPIHVFGPETHMTAIVGAAL 431          
BLAST of CV884530 vs. ExPASy Swiss-Prot
Match: ACLY_RAT (ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.997e-41
Identity = 86/170 (50.59%), Postives = 112/170 (65.88%), Query Frame = -1
Query:  251 SFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEGEVLQYARVVIDCATAD--PDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMPLYVRRGGPNSQRALAKMRALAEEIALPIEVYGPEATMTGICKQA 754
            ++I DLD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG  +EL NY EYSGAP+E +   YA+ ++   T +  PDG  + L+IGG IANFT+VAATF GI++             + ++VRRGGPN Q  L  M  + +   +PI V+G E  MT I   A
Sbjct:  251 AYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVRAIRDYQGSLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMA 418          
BLAST of CV884530 vs. ExPASy Swiss-Prot
Match: ACL2_SCHPO (Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces pombe GN=SPAC22A12.16 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.053e-37
Identity = 77/165 (46.67%), Postives = 104/165 (63.03%), Query Frame = -1
Query:  263 SFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEGEVLQYARVVIDCAT-ADPDGRKRALVIGGGIANFTDVAATFNGIIQXXXXXXXXXXXARMPLYVRRGGPNSQRALAKMRALAEEIALPIEVYGPEATMTGI 754
            +++  LD KT ASLK T+LN +GR+W +VAGGGASV+YAD V   G A EL NY EYSGAP +G+  +YA+ V+D  T  +P    + L IGGGIANFT  A TF  I +            ++ ++VRR GPN Q  L  +R   ++  LP++VYGPE  ++GI
Sbjct:  311 AYVQGLDAKTGASLKLTILNAEGRVWNLVAGGGASVVYADAVAVNGAADELANYGEYSGAPTDGQTYEYAKTVLDLMTRGEPRADGKVLFIGGGIANFTSPAVTFRAIARALGDYKDKLHAHKVSIWVRRAGPNYQEGLRVIREAGKKFDLPLKVYGPECHISGI 475          
The following BLAST results are available for this feature:
BLAST of CV884530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ACLY_MOUSE1.794e-4149.11ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 ... [more]
ACLY_SHEEP2.343e-4150.29ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV... [more]
ACLY_HUMAN2.343e-4150.29ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 ... [more]
ACLY_BOVIN2.343e-4150.29ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV... [more]
ACLY_CAEEL3.061e-4149.71Probable ATP-citrate synthase OS=Caenorhabditis el... [more]
ACLY_RAT3.997e-4150.59ATP-citrate synthase OS=Rattus norvegicus GN=Acly ... [more]
ACL2_SCHPO2.053e-3746.67Probable ATP-citrate synthase subunit 2 OS=Schizos... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884530 ID=CV884530; Name=CV884530; organism=Citrus sinensis; type=EST; length=754bp
TTTTTTTTTTTTTTTTTGGGAGTTAGAAGGCTACTTAATCTTTTATTATG
GGGACACTACAGACAGAGATCAGTTTTTCATCCTCATTAACCATATTTTG
AACTAACATTACATCCTGAGGTATCTGATACAGCGAAATTGGTACAAAGT
AATGATGATGGATACTAGAAATTTGCAATGACAATGGCGTGAGTGTGAAG
CATTGAAAAAAGGAGTTGATAGCTCATGCAGCAGCGCTAATGCACTCAAT
AGCCTGTTTGCATATGCCAGTCATTGTTGCTTCGGGCCCATAAACCTCAA
TGGGAAGGGCAATTTCCTCTGCCAGTGCTCGCATTTTTGCAAGGGCCCTC
TGGGAATTAGGACCTCCTCTCCTCACATATAGGGGCATTCTTGCTGCTTT
CAGCTTCGATTCCTTTTCCTTCAGGGCTTGGATTATGCCATTGAATGTAG
CTGCAACATCAGTGAAGTTAGCTATTCCTCCTCCAATCACAAGGGCTCTC
TTGCGACCATCAGGATCTGCAGTTGCACAATCAATTACAACTCTGGCATA
TTGCAAGACCTCCCCCTCGTTGGGTGCTCCACTGTATTCTGCATAGTTAC
CGAGCTCGGAGGCATAGCCAAGATCTCCAACCGTATCAGCATAGATGACA
CTTGCACCTCCTCCAGCTACCATAGTCCAGATTCGTCCTTTTGGGTTCAA
AACTGTGAATTTCAAAGATGCACTTGTCTTTTCATCTAGATCATGTATAA
AGCT
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