CX673616

Overview
NameCX673616
Unique NameCX673616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX673616 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.423e-81
Identity = 146/158 (92.41%), Postives = 154/158 (97.47%), Query Frame = -2
Query:  334 EGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 807
            EGPFEVS DGT+KF EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE+F GEFLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNTSSSTGKITLSVT+SKPETGEVIGVFES+QPSDTD+GAKVPKDVKIQGIWYAQLE
Sbjct:  175 EGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332          
BLAST of CX673616 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 300.827 bits (769), Expect = 5.776e-81
Identity = 145/158 (91.77%), Postives = 154/158 (97.47%), Query Frame = -2
Query:  334 EGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 807
            EGPFEVSPDGT+KF EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE+F GEFLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+S TGKITLSVT+SKPETGEVIGVFES+QPSDTD+GAKVPKDVKIQGIWYAQLE
Sbjct:  172 EGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329          
BLAST of CX673616 vs. ExPASy Swiss-Prot
Match: PSBO_FRIAG (Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.054e-78
Identity = 139/158 (87.97%), Postives = 151/158 (95.57%), Query Frame = -2
Query:  334 EGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 807
            EGPFEV+PDGT+KF EKDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPE+F G +LVPSYRGSSFLDPKGRGGS GYDNA+ALPAGGRGDEE+L KENIK+ SSSTGKITLSVTKSKPETGEVIGVFES+QPSDTD+G+K PKDVKIQGIWYAQLE
Sbjct:  172 EGPFEVAPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329          
BLAST of CX673616 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 7.807e-78
Identity = 139/158 (87.97%), Postives = 150/158 (94.94%), Query Frame = -2
Query:  334 EGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 807
            EGPFEVSPDGT+KF EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE+F  +FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+S TGKIT +VTKS P+TGEVIGVFES+QPSDTD+GAK PKDVKIQGIWYAQLE
Sbjct:  175 EGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLE 332          
BLAST of CX673616 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.332e-77
Identity = 140/159 (88.05%), Postives = 150/159 (94.34%), Query Frame = -2
Query:  331 EGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLEQ 807
            EGPFEVS DGT+KF EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPE+F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN KN +SS G ITLSVT SKPETGEVIGVF+SLQPSDTD+GAKVPKDVKI+G+WYAQLEQ
Sbjct:  173 EGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLEQ 331          
BLAST of CX673616 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.280e-76
Identity = 133/158 (84.18%), Postives = 150/158 (94.94%), Query Frame = -2
Query:  334 EGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 807
            EGPFEV  DG++KF E+DGIDYAAVTVQLPGGERVPFLFT+KQL ASGKPE+F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L+KEN+KNT++S G+ITL +TKSKPETGEVIGVFESLQPSDTD+GAKVPKDVKIQG+WY Q+E
Sbjct:  174 EGPFEVGSDGSVKFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331          
BLAST of CX673616 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.307e-76
Identity = 136/158 (86.08%), Postives = 149/158 (94.30%), Query Frame = -2
Query:  334 EGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 807
            EGPFEVS DG++KF EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKP++F GEFLVPSYRGSSFLDPKGRG STGYDNA+ALPAGGRGDEE+L KEN K+ +SS GKITLSVT++KPETGEVIGVFES+QPSDTD+GAK PKDVKIQG+WYAQLE
Sbjct:  171 EGPFEVSADGSVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 328          
BLAST of CX673616 vs. ExPASy Swiss-Prot
Match: PSBO1_ARATH (Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 2.777e-75
Identity = 133/158 (84.18%), Postives = 149/158 (94.30%), Query Frame = -2
Query:  334 EGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 807
            EGPFEV+ DG++ F E+DGIDYAAVTVQLPGGERVPFLFT+KQL ASGKP++F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT++S G+ITL VTKSKPETGEVIGVFESLQPSDTD+GAKVPKDVKIQG+WY QLE
Sbjct:  175 EGPFEVASDGSVNFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332          
BLAST of CX673616 vs. ExPASy Swiss-Prot
Match: PSBO_WHEAT (Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.294e-68
Identity = 132/158 (83.54%), Postives = 141/158 (89.24%), Query Frame = -2
Query:  334 EGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 807
            EGP EV    T+KF EKDGIDYAAVTVQLPGGERV FLFT+KQLVA+GKPE+F   FLVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGDEE+LAKEN+KN SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTD+ A  PKDVKIQG+WYAQLE
Sbjct:  169 EGPLEVRRRRTLKFEEKDGIDYAAVTVQLPGGERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLEA--PKDVKIQGVWYAQLE 323          
BLAST of CX673616 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.341e-53
Identity = 103/157 (65.61%), Postives = 119/157 (75.80%), Query Frame = -2
Query:  334 GPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 804
            G F+V  DG+ +  E DGIDYAA TVQLPGGERV FLFTIKQ    G  +   G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPA  R D E+L KEN+K T +  G    SV K  P TGE+ GVFES+QPSDTD+GAK PKD+K+ G+WYAQL+
Sbjct:  137 GSFKVGSDGSAELKEDDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291          
The following BLAST results are available for this feature:
BLAST of CX673616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PSBO_TOBAC4.423e-8192.41Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC5.776e-8191.77Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_FRIAG2.054e-7887.97Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLTU7.807e-7887.97Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SPIOL1.332e-7788.05Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO2_ARATH3.280e-7684.18Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO_PEA7.307e-7686.08Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO1_ARATH2.777e-7584.18Oxygen-evolving enhancer protein 1-1, chloroplasti... [more]
PSBO_WHEAT4.294e-6883.54Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_CHLRE1.341e-5365.61Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_23G06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-23G06-M11-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX673616 ID=CX673616; Name=CX673616; organism=Citrus sinensis; type=EST; length=808bp
TTTTTTTGAACATTAACAATGTCAATTCCAATCACTGCATCAGGCTATTC
CCGATCAGGAGAATCCCATAATGGGATGGGCGGCTATAGGCTACATGTGG
AAATGTCTCCAGGCTTTCGATATCACTGGTGAGAGGTGTGTTCAGGCCTC
AAATCACTCAAACCCATCACCGTTCAGAATTGCAAGCATTATTATAGCAT
GCCACGATAATATACAGACATGACAACATTCTCAGTGCTACTAAATTGAA
TTACAGAAATGTTTAGCAACACCTTCAACATGTTTCAAAATCTGAATAGG
AATAAGTACACTCATACAAGAAAAGCTCTATTGCTCAAGCTGTGCATACC
AGATACCCTGGATCTTAACATCCTTTGGAACCTTGGCTCCCATATCAGTA
TCAGATGGCTGAAGGCTCTCAAACACTCCAATAACCTCTCCAGTCTCAGG
CTTGCTCTTGGTAACGCTGAGGGTGATCTTCCCTGTTGAAGATGAAGTAT
TCTTGATATTCTCCTTGGCGAGATCTTCCTCATCCCCTCTTCCGCCAGCA
GGCAATGCAATAGCATTGTCATAACCAGTTGAACCACCCCTTCCCTTTGG
GTCCAAGAAGGATGATCCACGGTATGATGGTACAAGGAACTCTCCTCCGA
AATTCTCAGGCTTGCCTGATGCTACCAATTGTTTGATGGTGAAAAGGAAG
GGCACACGCTCGCCTCCAGGCAGCTGAACTGTCACAGCAGCATAGTCAAT
TCCATCCTTCTCCACAAACTTAATGGTGCCATCGGGGGACACTTCAAAAG
GTCCCTCA
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