CV884434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884434 vs. ExPASy Swiss-Prot
Match: CT043_PONAB (UPF0549 protein C20orf43 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.826e-23 Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = -3 Query: 526 LSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEVSVLRERM 924 LS E LR P V +LG ++NK+A++ LL K+ L K S+IK +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E+V VL+ RM Sbjct: 39 LSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRM 186
BLAST of CV884434 vs. ExPASy Swiss-Prot
Match: CT043_HUMAN (UPF0549 protein C20orf43 OS=Homo sapiens GN=C20orf43 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 8.826e-23 Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = -3 Query: 526 LSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEVSVLRERM 924 LS E LR P V +LG ++NK+A++ LL K+ L K S+IK +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E+V VL+ RM Sbjct: 39 LSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRM 186
BLAST of CV884434 vs. ExPASy Swiss-Prot
Match: CT043_MACFA (UPF0549 protein C20orf43 homolog OS=Macaca fascicularis GN=QccE-12445 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.153e-22 Identity = 63/148 (42.57%), Postives = 87/148 (58.78%), Query Frame = -3 Query: 526 LSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEVSVLRERM 924 LS E LR P V +LG ++NK+A++ LL K+ L K S+IK +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG E+V VL+ RM Sbjct: 39 LSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTNEDVDVLKARM 186
BLAST of CV884434 vs. ExPASy Swiss-Prot
Match: CT043_RAT (UPF0549 protein C20orf43 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.568e-22 Identity = 61/148 (41.22%), Postives = 88/148 (59.46%), Query Frame = -3 Query: 526 LSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEVSVLRERM 924 LS E LR P V +LG ++NK+A++ LL K+ L K S+I+ +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E+V +L+ RM Sbjct: 39 LSQEVLRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKATSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRM 186
BLAST of CV884434 vs. ExPASy Swiss-Prot
Match: CT043_CHICK (UPF0549 protein C20orf43 homolog OS=Gallus gallus GN=RCJMB04_16p11 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.380e-22 Identity = 61/148 (41.22%), Postives = 88/148 (59.46%), Query Frame = -3 Query: 526 LSNEPLREPCVIDKLGTIFNKEALVHALLSKNLPKQ----YSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEVSVLRERM 924 LS E L P V +LG ++NK+A++ LL K+ K S+IK LK++ + L+ P G +E+ G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NGN+E+V VL++RM Sbjct: 39 LSQEKLCRPIVACELGRLYNKDAVIEFLLDKSADKTPMEAASHIKSLKNVTELNLADNPAWSGDKESKKGDTYDDIQSARFICPVVGLEMNGRHRFCFLRNCGCVFSERALKEIKTEVCHKCGVPFQEEDVIILNGNKEDVEVLKKRM 186
BLAST of CV884434 vs. ExPASy Swiss-Prot
Match: CT043_BOVIN (UPF0549 protein C20orf43 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.380e-22 Identity = 61/148 (41.22%), Postives = 88/148 (59.46%), Query Frame = -3 Query: 526 LSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEVSVLRERM 924 LS E LR P V +LG ++NK+A++ LL K+ L K S+IK +K++ ++LS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E+V VL+ R+ Sbjct: 39 LSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKAASHIKSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVEVLKSRI 186
BLAST of CV884434 vs. ExPASy Swiss-Prot
Match: CT043_PIG (UPF0549 protein C20orf43 homolog OS=Sus scrofa PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.721e-22 Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = -3 Query: 526 LSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVPGAEEN-----GDG------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEVSVLRERM 924 LS E LR P V +LG ++NK+A++ LL K+ L K S+IK +K++ ++LS P E + GD RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E+V++L+ RM Sbjct: 39 LSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKAASHIKSIKNVTELRLSDNPAWEGDKGSTKGDKHDDLQRARFICPVVGLEMNGRHRFCYLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVAMLQTRM 186
BLAST of CV884434 vs. ExPASy Swiss-Prot
Match: CT043_MOUSE (UPF0549 protein C20orf43 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.721e-22 Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = -3 Query: 526 LSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEVSVLRERM 924 LS E LR P V +LG ++NK+A++ LL K+ L K S+I+ +K++ ++LS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E+V +L++RM Sbjct: 39 LSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRM 186
BLAST of CV884434 vs. ExPASy Swiss-Prot
Match: U549_DICDI (UPF0549 protein OS=Dictyostelium discoideum GN=DDB_G0288549 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.126e-16 Identity = 51/156 (32.69%), Postives = 81/156 (51.92%), Query Frame = -3 Query: 535 LSNEPLREPCVIDKLGTIFNKEALVHALLSKNL--PKQYSYIKGLKDLINVKLSRVPGAEENGDGIRFQCPITGLEF-NGKYRFVAMRTCGHVLSTKALKEVKSS-----------------------SCLVCHEEFGEMDKILINGNEEEVSVLR 924 L+ + L EP V+D LG +FNK+ ++ ALL+ +L K +S+I+ L+ + V S P E++ + CPIT +E + Y+F ++TCGHV S KA KE+K+ SC +C +E+ D I IN + EE ++ Sbjct: 40 LAQDTLSEPIVLDDLGNLFNKDNIIEALLNGSLETSKNFSHIRSLRSIYTVNFSPNPAHEKDSTVSPWLCPITKIEVGSSNYKFKFLKTCGHVFSEKAFKELKNDDSNNNNNNNNNNKKEIDSSKDNLSCFLCSKEYITNDLITINPSGEEFEQMK 195
BLAST of CV884434 vs. ExPASy Swiss-Prot
Match: YAT9_SCHPO (UPF0549 protein C1D4.09c OS=Schizosaccharomyces pombe GN=SPAC1D4.09c PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.971e-14 Identity = 43/134 (32.09%), Postives = 75/134 (55.97%), Query Frame = -3 Query: 526 LSNEPLREPCVIDKLGTIFNKEALVHALLSKN-LPKQYSYIKGLKDLINVKLSRVPGAEENGDGIRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEVSVLRERM 924 +++EPL P V LG ++NK +++ LL ++ +PK S+IK LKD++ +++ ++ + + CPIT + Y+F + CGHV ALK+ C C++ + E D I IN N E++ L +R+ Sbjct: 42 ITDEPLYPPIVSCGLGKLYNKASILQMLLDRSSVPKSPSHIKSLKDVVQLQVEL-----DDSGKVLWLCPITRHVMSDTYQFAYIVPCGHVFEYSALKQFGEKMCFQCNQVYEEKDVIPINPNAEQLKTLSKRL 170 The following BLAST results are available for this feature:
BLAST of CV884434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884434 ID=CV884434; Name=CV884434; organism=Citrus sinensis; type=EST; length=926bpback to top |