CV884430

Overview
NameCV884430
Unique NameCV884430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12127 contig Csv1_Contig12127:469..1314. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884430 vs. ExPASy Swiss-Prot
Match: ARD3_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 OS=Arabidopsis thaliana GN=ARD3 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 5.048e-99
Identity = 164/195 (84.10%), Postives = 182/195 (93.33%), Query Frame = 1
Query:   34 QDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPIDAAA 618
            +D REEVIQAWYMDDS+EDQRLPHHKDPKEF+SLD+L+ELGVLSWRLDADNYETDE+L+KIRE RGYSYMDFCEVCPEKLPNYE K+K+FFEEHLHTDEEIRYCVAGSGYFDVRDRNE WIR+WVKKGGMIVLPAG YHRFT+D+DNYIKAMRLFVG+PVWTP+NRPHDHLPARK Y+ NF++   G   IDA+A
Sbjct:    6 KDGREEVIQAWYMDDSEEDQRLPHHKDPKEFLSLDKLAELGVLSWRLDADNYETDEDLKKIRESRGYSYMDFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGSGYFDVRDRNEAWIRVWVKKGGMIVLPAGIYHRFTVDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYIDNFVKVNEG-GVIDASA 199          
BLAST of CV884430 vs. ExPASy Swiss-Prot
Match: ARD2_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Arabidopsis thaliana GN=ARD2 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 6.171e-97
Identity = 160/184 (86.96%), Postives = 175/184 (95.11%), Query Frame = 1
Query:   28 APQDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFL 579
            A +D REEVIQAWYMDDS+EDQRLPHHKDPKEFVSLD+L+ELGVLSWRLDADNYETDE+L+KIRE RGYSYMDFCEVCPEKLPNYE K+K+FFEEHLHTDEEIRYCVAG+GYFDVRDRNE WIR+ VKKGGMIVLPAG YHRFT+D+DNYIKAMRLFVG+PVWTP+NRPHDHLPARK YV NF+
Sbjct:    4 AVKDGREEVIQAWYMDDSEEDQRLPHHKDPKEFVSLDKLAELGVLSWRLDADNYETDEDLKKIRESRGYSYMDFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGTGYFDVRDRNEAWIRVLVKKGGMIVLPAGIYHRFTVDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVDNFM 187          
BLAST of CV884430 vs. ExPASy Swiss-Prot
Match: ARD1_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Arabidopsis thaliana GN=ARD1 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.573e-92
Identity = 154/197 (78.17%), Postives = 175/197 (88.83%), Query Frame = 1
Query:   28 APQDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPIDAAA 618
            A +D  EEVIQAWY+D+ +EDQ+LPHHKDPKEFVSLD+L+ELGVL WRLDADNYETDEEL++IRE RGYSYMD CEVCPEKLPNYEEK+K FFEEHLH DEEIRYC+AGSGYFDVRD N+ WIR+WVKKGG+IV PAG YHRFT+D+DNY+KAMRLFVG PVWT +NRPHDHLPARK Y++ FL K  GD  IDA+A
Sbjct:    4 AAKDQTEEVIQAWYLDNKEEDQKLPHHKDPKEFVSLDKLAELGVLCWRLDADNYETDEELKRIRESRGYSYMDLCEVCPEKLPNYEEKVKMFFEEHLHIDEEIRYCLAGSGYFDVRDLNDIWIRVWVKKGGLIVFPAGIYHRFTVDSDNYMKAMRLFVGGPVWTAYNRPHDHLPARKAYMKKFL-KVIGDRNIDASA 199          
BLAST of CV884430 vs. ExPASy Swiss-Prot
Match: ARD2_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. japonica GN=ARD2 PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.628e-89
Identity = 146/193 (75.65%), Postives = 173/193 (89.64%), Query Frame = 1
Query:   34 QDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPIDA 612
            QD +EEVI+AWYMDDS+EDQRLPHH++PKEF+ L +LSELG+LSWRL+AD++E DE L+KIRE RGYSYMD C+VCPEKLPNYE K+KNFFEEHLHTDEEIRYC+ GSGYFDVRD+N++WIR+ VKKGGMIVLPAG YHRFTLD+DNYIKAMRLFVG+PVWTP+NRPHDHLPARK YV+  + +  G   ++A
Sbjct:    6 QDGKEEVIEAWYMDDSEEDQRLPHHREPKEFIPLSKLSELGILSWRLNADDWENDENLKKIREARGYSYMDICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVEKIINR-GGTQAVEA 197          
BLAST of CV884430 vs. ExPASy Swiss-Prot
Match: ARD2_ORYSI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. indica GN=ARD2 PE=2 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 1.628e-89
Identity = 146/193 (75.65%), Postives = 173/193 (89.64%), Query Frame = 1
Query:   34 QDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPIDA 612
            QD +EEVI+AWYMDDS+EDQRLPHH++PKEF+ L +LSELG+LSWRL+AD++E DE L+KIRE RGYSYMD C+VCPEKLPNYE K+KNFFEEHLHTDEEIRYC+ GSGYFDVRD+N++WIR+ VKKGGMIVLPAG YHRFTLD+DNYIKAMRLFVG+PVWTP+NRPHDHLPARK YV+  + +  G   ++A
Sbjct:    6 QDGKEEVIEAWYMDDSEEDQRLPHHREPKEFIPLSKLSELGILSWRLNADDWENDENLKKIREARGYSYMDICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVEKIINR-GGTQAVEA 197          
BLAST of CV884430 vs. ExPASy Swiss-Prot
Match: ARD1_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Oryza sativa subsp. japonica GN=ARD1 PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 5.790e-87
Identity = 141/192 (73.44%), Postives = 170/192 (88.54%), Query Frame = 1
Query:   34 QDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPID 609
            QD + EVI+AWYMDDS+EDQRLPHH++PKEF+ +D+L+ELGV+SWRL+ DN+E  E L++IRE RGYSY+D C+VCPEKLPNYE KIK+FFEEHLHTDEEIRYC+ GSGYFDVRD+N++WIRI +KKGGMIVLPAG YHRFTLDTDNYIKAMRLFVGDPVWTP+NRPHDHLPARK ++   L+ E  +  ++
Sbjct:    6 QDGKTEVIEAWYMDDSEEDQRLPHHREPKEFIHVDKLTELGVISWRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLFVGDPVWTPYNRPHDHLPARKEFLAKLLKSEGENQAVE 197          
BLAST of CV884430 vs. ExPASy Swiss-Prot
Match: ARD1_ORYSI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Oryza sativa subsp. indica GN=ARD1 PE=1 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 5.790e-87
Identity = 141/192 (73.44%), Postives = 170/192 (88.54%), Query Frame = 1
Query:   34 QDPREEVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPID 609
            QD + EVI+AWYMDDS+EDQRLPHH++PKEF+ +D+L+ELGV+SWRL+ DN+E  E L++IRE RGYSY+D C+VCPEKLPNYE KIK+FFEEHLHTDEEIRYC+ GSGYFDVRD+N++WIRI +KKGGMIVLPAG YHRFTLDTDNYIKAMRLFVGDPVWTP+NRPHDHLPARK ++   L+ E  +  ++
Sbjct:    6 QDGKTEVIEAWYMDDSEEDQRLPHHREPKEFIHVDKLTELGVISWRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLFVGDPVWTPYNRPHDHLPARKEFLAKLLKSEGENQAVE 197          
BLAST of CV884430 vs. ExPASy Swiss-Prot
Match: ARD4_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Arabidopsis thaliana GN=ARD4 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.892e-75
Identity = 121/177 (68.36%), Postives = 148/177 (83.62%), Query Frame = 1
Query:   55 IQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQK 585
            ++AW+MDDS+EDQRLPHH++PKE VSLD L+ELGVL W+L+ +NYE D EL KIREDRGY YMD  ++CPEK+ NYEEK+KNFF EH+H DEEIRYC+AGSGYFDVRD++++WIRIW++ G +IVLPAG YHRFTLD  NYIK MRLFVG+PVWTP+NRP +  P RK Y+     K
Sbjct:    3 LEAWFMDDSNEDQRLPHHRNPKELVSLDYLAELGVLYWKLNPENYENDSELSKIREDRGYDYMDLLDLCPEKVSNYEEKLKNFFTEHIHKDEEIRYCLAGSGYFDVRDKDDRWIRIWMQPGDLIVLPAGIYHRFTLDASNYIKLMRLFVGEPVWTPYNRPQEEHPVRKKYIHGLTYK 179          
BLAST of CV884430 vs. ExPASy Swiss-Prot
Match: ARD3_ORYSJ (Putative 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 OS=Oryza sativa subsp. japonica GN=ARD3 PE=3 SV=3)

HSP 1 Score: 258.84 bits (660), Expect = 2.702e-68
Identity = 116/178 (65.17%), Postives = 143/178 (80.34%), Query Frame = 1
Query:   46 EEVIQAWYMDDSD---EDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQ 570
            EEV+QAWYMDD D   EDQRLPH + P + + L +L +LG+++ RLDADN+E DE L+ +RE RGY +MD  E+ PEK+PNYE  IK FFEEHLHTDEE+RYC+ GSGYFDVRD N+KW+R+ V+KG +IV+PAG YHRFTLDT+NYIK MRLF G P WT +NRPHDHLP RK Y++
Sbjct:    9 EEVVQAWYMDDDDNAEEDQRLPHRRQPDDLLPLAKLLDLGLVAMRLDADNHEHDENLKIMREQRGYLHMDIVELTPEKMPNYEVMIKRFFEEHLHTDEEVRYCLDGSGYFDVRDENDKWVRVSVRKGALIVVPAGIYHRFTLDTNNYIKTMRLFSGGPDWTAYNRPHDHLPERKKYLE 186          
BLAST of CV884430 vs. ExPASy Swiss-Prot
Match: MTND_BOVIN (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Bos taurus GN=ADI1 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 9.610e-66
Identity = 115/180 (63.89%), Postives = 141/180 (78.33%), Query Frame = 1
Query:   52 VIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELRKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKGYVQNFLQKEA 591
            +++AWY+DD+ +D RLPH  +P   V L+QL  LGVL W+LDAD YE D EL KIR++R YS++D   +  +KLPNYEEKIK FFEEHLH DEEIRY + GSGYFDVRD+ ++WIRI ++KG MI LPAG YHRFTLD  NY+KAMRLFVGDPVWTP+NRP DHL AR  Y++ FL + A
Sbjct:    1 MVEAWYIDDAADDPRLPHRAEPARPVGLEQLRRLGVLYWKLDADKYENDPELEKIRKERNYSWVDIITISKDKLPNYEEKIKMFFEEHLHLDEEIRYILDGSGYFDVRDQEDRWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGDPVWTPYNRPSDHLEARTQYLE-FLAQSA 179          
The following BLAST results are available for this feature:
BLAST of CV884430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
ARD3_ARATH5.048e-9984.101,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ARATH6.171e-9786.961,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ARATH1.573e-9278.171,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ORYSJ1.628e-8975.651,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ORYSI1.628e-8975.651,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ORYSJ5.790e-8773.441,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ORYSI5.790e-8773.441,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD4_ARATH3.892e-7568.361,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD3_ORYSJ2.702e-6865.17Putative 1,2-dihydroxy-3-keto-5-methylthiopentene ... [more]
MTND_BOVIN9.610e-6663.891,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003D07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884430 ID=CV884430; Name=CV884430; organism=Citrus sinensis; type=EST; length=846bp
GTTCAAAGAATTTCAGAAACCATGGTCGCCCCTCAGGATCCTAGAGAGGA
AGTTATTCAGGCATGGTACATGGATGATAGTGATGAAGATCAAAGACTCC
CCCATCACAAGGATCCAAAGGAATTTGTGTCCCTGGACCAGCTTTCTGAA
CTTGGAGTACTCAGCTGGCGATTAGATGCTGATAACTATGAAACTGATGA
GGAACTGAGGAAGATTCGTGAAGATCGCGGATATTCTTACATGGACTTTT
GCGAGGTTTGCCCAGAAAAACTGCCAAATTATGAAGAGAAGATCAAAAAC
TTTTTCGAAGAACATCTTCATACAGATGAAGAGATCCGCTACTGTGTGGC
AGGAAGTGGTTACTTTGATGTCAGGGACCGTAATGAAAAATGGATTCGCA
TATGGGTAAAGAAAGGAGGAATGATTGTTTTACCTGCTGGATGTTACCAT
CGCTTTACTTTGGATACAGACAACTATATCAAGGCTATGCGTCTGTTTGT
AGGTGATCCCGTTTGGACTCCATTCAACCGTCCCCATGATCATTTACCCG
CAAGGAAGGGATATGTTCAAAATTTCTTGCAGAAGGAAGCTGGTGACAGC
CCTATCGATGCTGCTGCGTAATTTGTGCAATTCCTTGCTCATTGGATCAA
TAGTACTGGCTTTAATAAATAAAGAAACTTCTGTTTATATGGTTTGTCTG
TGTCTGAGGCTCCTGGAGTTACCTGTGTGGTTTAATTGCTTGTGTAGCAT
CTCTGCTTGCTTGGTTGCAGCCACTGCTGTAAACTCACCATGAATATCTG
TGTCCTTCATTTTCTGTATACAAGAGTACCATATATATTAAAAAAA
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