EY665275

Overview
NameEY665275
Unique NameEY665275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1147
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665275 vs. ExPASy Swiss-Prot
Match: KC1D_ARATH (Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 3.983e-42
Identity = 79/86 (91.86%), Postives = 85/86 (98.84%), Query Frame = 2
Query:   92 VKAGTKKQKYETLSEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVS 349
            +KAGTKKQKYE +SEKKVSTSIEALCRGYP+EFASYFHYCRSLRFDDKPDYAYLKR+FRDLFIREGFQFDYVFDWTILKYQQSQ++
Sbjct:  216 LKAGTKKQKYERISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLT 301          
BLAST of EY665275 vs. ExPASy Swiss-Prot
Match: KC1D_XENLA (Casein kinase I isoform delta OS=Xenopus laevis GN=csnk1d PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 5.966e-30
Identity = 56/86 (65.12%), Postives = 75/86 (87.21%), Query Frame = 2
Query:   92 VKAGTKKQKYETLSEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVS 349
            +KA TK+QKYE +SEKK+ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK+  S+ +
Sbjct:  216 LKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAA 301          
BLAST of EY665275 vs. ExPASy Swiss-Prot
Match: KC1D_RAT (Casein kinase I isoform delta OS=Rattus norvegicus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 5.966e-30
Identity = 56/86 (65.12%), Postives = 75/86 (87.21%), Query Frame = 2
Query:   92 VKAGTKKQKYETLSEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVS 349
            +KA TK+QKYE +SEKK+ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK+  S+ +
Sbjct:  216 LKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAA 301          
BLAST of EY665275 vs. ExPASy Swiss-Prot
Match: KC1D_PONAB (Casein kinase I isoform delta OS=Pongo abelii GN=CSNK1D PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 5.966e-30
Identity = 56/86 (65.12%), Postives = 75/86 (87.21%), Query Frame = 2
Query:   92 VKAGTKKQKYETLSEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVS 349
            +KA TK+QKYE +SEKK+ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK+  S+ +
Sbjct:  216 LKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAA 301          
BLAST of EY665275 vs. ExPASy Swiss-Prot
Match: KC1D_MOUSE (Casein kinase I isoform delta OS=Mus musculus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 5.966e-30
Identity = 56/86 (65.12%), Postives = 75/86 (87.21%), Query Frame = 2
Query:   92 VKAGTKKQKYETLSEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVS 349
            +KA TK+QKYE +SEKK+ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK+  S+ +
Sbjct:  216 LKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAA 301          
BLAST of EY665275 vs. ExPASy Swiss-Prot
Match: KC1D_HUMAN (Casein kinase I isoform delta OS=Homo sapiens GN=CSNK1D PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 5.966e-30
Identity = 56/86 (65.12%), Postives = 75/86 (87.21%), Query Frame = 2
Query:   92 VKAGTKKQKYETLSEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVS 349
            +KA TK+QKYE +SEKK+ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK+  S+ +
Sbjct:  216 LKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAA 301          
BLAST of EY665275 vs. ExPASy Swiss-Prot
Match: KC1D_BOVIN (Casein kinase I isoform delta OS=Bos taurus GN=CSNK1D PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 5.966e-30
Identity = 56/86 (65.12%), Postives = 75/86 (87.21%), Query Frame = 2
Query:   92 VKAGTKKQKYETLSEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVS 349
            +KA TK+QKYE +SEKK+ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK+  S+ +
Sbjct:  216 LKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAA 301          
BLAST of EY665275 vs. ExPASy Swiss-Prot
Match: KC1D_XENTR (Casein kinase I isoform delta OS=Xenopus tropicalis GN=csnk1d PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.329e-29
Identity = 55/80 (68.75%), Postives = 72/80 (90.00%), Query Frame = 2
Query:   92 VKAGTKKQKYETLSEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 331
            +KA TK+QKYE +SEKK+ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  216 LKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of EY665275 vs. ExPASy Swiss-Prot
Match: KC1DB_DANRE (Casein kinase I isoform delta-B OS=Danio rerio GN=csnk1db PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.329e-29
Identity = 55/80 (68.75%), Postives = 72/80 (90.00%), Query Frame = 2
Query:   92 VKAGTKKQKYETLSEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 331
            +KA TK+QKYE +SEKK+ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  216 LKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
BLAST of EY665275 vs. ExPASy Swiss-Prot
Match: KC1DA_DANRE (Casein kinase I isoform delta-A OS=Danio rerio GN=csnk1da PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.329e-29
Identity = 55/80 (68.75%), Postives = 72/80 (90.00%), Query Frame = 2
Query:   92 VKAGTKKQKYETLSEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 331
            +KA TK+QKYE +SEKK+ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK+
Sbjct:  216 LKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295          
The following BLAST results are available for this feature:
BLAST of EY665275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KC1D_ARATH3.983e-4291.86Casein kinase I isoform delta-like OS=Arabidopsis ... [more]
KC1D_XENLA5.966e-3065.12Casein kinase I isoform delta OS=Xenopus laevis GN... [more]
KC1D_RAT5.966e-3065.12Casein kinase I isoform delta OS=Rattus norvegicus... [more]
KC1D_PONAB5.966e-3065.12Casein kinase I isoform delta OS=Pongo abelii GN=C... [more]
KC1D_MOUSE5.966e-3065.12Casein kinase I isoform delta OS=Mus musculus GN=C... [more]
KC1D_HUMAN5.966e-3065.12Casein kinase I isoform delta OS=Homo sapiens GN=C... [more]
KC1D_BOVIN5.966e-3065.12Casein kinase I isoform delta OS=Bos taurus GN=CSN... [more]
KC1D_XENTR1.329e-2968.75Casein kinase I isoform delta OS=Xenopus tropicali... [more]
KC1DB_DANRE1.329e-2968.75Casein kinase I isoform delta-B OS=Danio rerio GN=... [more]
KC1DA_DANRE1.329e-2968.75Casein kinase I isoform delta-A OS=Danio rerio GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-A10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665275 ID=EY665275; Name=EY665275; organism=Citrus sinensis; type=EST; length=1147bp
TTTTTTTAAGGGGGGGAACGCAGGTCGGGTCGGGATTCCCGGGTCGACCA
CGCGTCTGTACCTATGTCTCTGTAGTCTTCCCCTTTTAAGAGTGAAAGCA
GGAACTAAGAAGCAGAAGTATGAGACCCTTAGTGAGAAGAAAGTGTCAAC
TTCAATTGAGGCCTTATGTCGAGGTTATCCTACAGAATTTGCATCCTATT
TTCATTACTGCCGGTCACTGCGATTTGATGATAAACCAGATTATGCTTAT
TTGAAAAGACTCTTCCGTGACCTTTTTATACGTGAAGGTTTCCAGTTTGA
TTATGTGTTTGATTGGACAATTTTGAAGTATCAGCAGTCACAAGTTTCTA
CTCCTGCCCGTGCAATTGGTCCTGGAGCTGGACCAAGTAGTGGCATGCCT
CCTGCTGCTGCTAATGTTGATAGGCAATCGGGTGCTGAAAGAAGGTAGAC
ATACTGGTTGGTCATCAACAGATCCCTCCTCGAGGGAGGAATTCTGGACC
AGTTGGAAATTCTGGCAACTGGTCCAAACAAAAAAGTCCAATGGCAAATG
GTCCAGCATTTTCTAAAAAATGGCAAGATGGTCTAAGTTATAACCAATTG
CGATCAAAGGGAATCTCAAGGGCAAGTTGCTGGTACCAAAACGTCGGGGA
AACCCCTGGGGGTTGGGAGGGACACTGGATCCCCTCCGCCCCCCCAACAA
AAAAAAGAAAAGCCAAGGAAGATTTTACAAAAAATTTTTAGAGGGGCAAA
AAAATTTACCTTGTTTGATTAACACCAAAAAAAGGGGAATAAAAACTTTG
GGGGGGGGAAGCTATTCCAAAGAATATAGAATTTTTTGATTCCCAACTTA
TTTGGGGGGCAGAAGAGGGCGTGCTTTTTTCAATTAAAAAAGGGAAGGGG
GAACAACCATTATGAATAGATGTTACAAAAGACCCCATCCCCACGCGGGA
GATATTCGGGAAGAGGGGGCTACTTTTGATAAAACACCCACCAAAAGGGG
GGGGAAAAAATGCGCCACGGGTGTTATGAGGGGGGAAAGATAGGGTGTCC
TGGGAAAGGAAAATAATAAATTTAAAAGAAAAATGGCAGAAAGTAAAAAG
AAGAGAAATTTTTAAATCCGGCATCTAGAATTAAAATAACCGCAACT
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