CV884413

Overview
NameCV884413
Unique NameCV884413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884413 vs. ExPASy Swiss-Prot
Match: DNAJ_HYDTH (Chaperone protein dnaJ OS=Hydrogenobacter thermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.062e-11
Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = -3 
Query:  422 HYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYD 610
            +YQ LG+S  A  EEIK AYRRL+KEYHPD ++   + ASEKF ++ E Y +LS+EE R+ YD
Sbjct:    6 YYQILGVSKDATAEEIKKAYRRLAKEYHPDISA--DENASEKFKEINEAYHILSDEERRKEYD 66
[Close]
BLAST of CV884413 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = -3 
Query:  422 HYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYD 610
            +Y+ LG+S +A  +EIK AYR+LSK+YHPD    P   A+EKF +++E Y+VLS++E R  YD
Sbjct:    6 YYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAP--DAAEKFKEIKEAYEVLSDDEKRARYD 66
[Close]
BLAST of CV884413 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = -3 
Query:  422 HYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYD 610
            +Y+ LG+S +A  EEIK AYR+LSK+YHPD    P   A+EKF +++E Y+VLS+++ R  YD
Sbjct:    6 YYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEP--DAAEKFKEIKEAYEVLSDDQKRAHYD 66
[Close]
BLAST of CV884413 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = -3 
Query:  422 HYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYD 610
            +Y+ LG+S +A  +EIK AYR+LSK+YHPD    P   A+EKF +++E Y+VLS++E R  YD
Sbjct:    6 YYEVLGVSKNATKDEIKKAYRKLSKQYHPDINKAP--DAAEKFKEIKEAYEVLSDDEKRARYD 66
[Close]
BLAST of CV884413 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein dnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = -3 
Query:  422 HYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYD 610
            +Y+ LG+S +A  EEIK AYR+LSK+YHPD    P   A+EKF +++E Y+VLS+++ R  YD
Sbjct:    6 YYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEP--DAAEKFKEIKEAYEVLSDDQKRAHYD 66
[Close]
BLAST of CV884413 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTR (Chaperone protein dnaJ OS=Bacillus thermoglucosidasius GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = -3 
Query:  422 HYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYD 610
            +Y+ LG+S +A  EEIK AYR+LSK+YHPD    P   A+EKF +++E Y+VLS+++ R  YD
Sbjct:    6 YYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEP--DAAEKFKEIKEAYEVLSDDQKRAHYD 66
[Close]
BLAST of CV884413 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLP8 (Chaperone protein dnaJ OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = -3 
Query:  422 HYQFLGISPSADLEEIKSAYRRLSKEYHPDTTSLPLKAASEKFLKLREVYDVLSNEESRRFYD 610
            +Y+ LG+S SAD +EIK AYR+L+ +YHPD      K A EKF +  E Y+VLSN++ RR YD
Sbjct:    5 YYEILGVSRSADKDEIKKAYRKLALKYHPDKNP-DNKEAEEKFKEANEAYEVLSNDDKRRRYD 66
The following BLAST results are available for this feature:
BLAST of CV884413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DNAJ_HYDTH1.062e-1155.56Chaperone protein dnaJ OS=Hydrogenobacter thermoph... [more]
DNAJ_GEOKA2.367e-1150.79Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNAJ_BACST3.091e-1150.79Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]
DNAJ_GEOTN4.037e-1150.79Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]
DNAJ_GEOSW4.037e-1150.79Chaperone protein dnaJ OS=Geobacillus sp. (strain ... [more]
DNAJ_BACTR4.037e-1150.79Chaperone protein dnaJ OS=Bacillus thermoglucosida... [more]
DNAJ_CHLP88.994e-1152.38Chaperone protein dnaJ OS=Chlorobaculum parvum (st... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003C06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884413 ID=CV884413; Name=CV884413; organism=Citrus sinensis; type=EST; length=858bp
TGATAGTTTTGTTTCACCATTGCAATAACCTCAGCTCTCAGGGACTTCTT
ATAAATGTTGTTATATACACCTACCTTCAGGTACATTCCATGCATATTAA
TATGTATACGATTCCTCTAGAGTCTAGATTGTTAAATACTAACTAAGCAA
CAAATTATATCTGTGGGAACCATCCCCATTAATAATATGGTTCCTTGAAA
TACAGCGCATAAATAATGCAACAAAAAGTAAAAATAATAACAACAACATC
AAAGGTGAGAGCTGTCATGGCTTGGTCACTCAGCTCTATATTTCTTCCTC
CTAATCGATCCACCATGTCCGGAATTGATTCGTAGTTCTTCAATGCTTGA
TCATAAGGATCTTCAAATTTCATTTTTAGCTTCTCAGCTTTTCGGCTTGC
AGCTTCTTGAGCAAGTGTCCAGTCATAAAACCTTCTGCTTTCTTCATTGC
TTAATACATCGTAAACTTCCCTTAGCTTTAGGAACTTCTCAGAAGCAGCC
TTTAGAGGAAGTGATGTTGTGTCTGGGTGGTACTCTTTTGATAATCTTCT
GTAAGCTGATTTTATCTCTTCCAAATCCGCGCTTGGTGATATTCCTAAGA
ACTGGTAATGAGAATCAGAGGAGTTGTCTAAAAGATCAGCGAACTTCTCA
CCCAAGAGATTCTTCTGCTCTTCTTCAGCATTAAAATTCTGGTTTGTTTG
GTGTGACGATGATGAGCTTCCACCAATCCACCCTTCATCTTCGTTTTCCC
AATGAATCCTTGTATCAACTCCCGGCTGCGCTCTTCGTTGGCTCTTGTTA
CTGCCAACCTTTTGCGATGCAAACACACGCAGAATTTTGCTTCTTGTCCT
TGCTGTTG
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