CX043426

Overview
NameCX043426
Unique NameCX043426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX043426 vs. ExPASy Swiss-Prot
Match: DRPE_CRAPL (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.260e-33
Identity = 67/135 (49.63%), Postives = 87/135 (64.44%), Query Frame = 1 
Query:  151 NDKDLIQVALNXXXXXXXXXXNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLRAIVTTVGGFARPQIDLSRQNFANIFDQSVGYKLTPPFDPYSNTVNYLLPSYVIPYVGLVGYVGS 555
            +D  L++  LN            A G+G+D +EPE+A GGP P G  KANL      II +F YQE GH+RAI ++V GF RP +DLS ++FA + D + G  L PPFDPY+N +NYLL  YV+PYVGL GYVG+
Sbjct:   38 SDVSLLEFPLNLELLEAEFFAWAAFGKGIDELEPELAKGGPSPIGVQKANLSPFIRDIIAQFAYQEFGHVRAIQSSVEGFPRPLLDLSAKSFATVMDSAFGKTLKPPFDPYANDINYLLACYVVPYVGLTGYVGA 172
The following BLAST results are available for this feature:
BLAST of CX043426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRPE_CRAPL2.260e-3349.63Desiccation-related protein PCC13-62 OS=Craterosti... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_11A04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A04-A7-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043426 ID=CX043426; Name=CX043426; organism=Citrus sinensis; type=EST; length=559bp
GCTGGTTTTGTTTATGAATTGCCCATAAAAAAAAAAATGGCAACTCGATA
CTATTCTTTCGTTGTAGCTTTGCATCTTACATTAATGAATATTCTTTTTG
GCATGGTCGTCGGTGCTGCAGCTCCAGCTTCCCGCGGACCATTCGAAGCC
AACGATAAGGATCTTATTCAAGTAGCTCTGAATTTGGAGTTCTTAGAAAC
TGAATTCTTCTTAAATGGTGCACTCGGCAGAGGACTTGACAGTATAGAGC
CAGAGATGGCAGCGGGTGGTCCTCCTCCGACTGGCGCCAGCAAGGCCAAC
CTTGACCATACTACATATCGGATCATTGAGGAATTCGGTTATCAGGAGAT
TGGCCATCTCAGGGCTATCGTAACAACAGTTGGTGGATTTGCAAGGCCTC
AGATAGATCTCAGCCGTCAAAATTTCGCCAATATATTTGACCAATCAGTT
GGTTACAAACTCACTCCTCCATTCGACCCTTATTCCAACACTGTCAATTA
TCTCTTACCAAGCTATGTCATCCCTTATGTGGGACTCGTCGGTTATGTTG
GCTCCATTC
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