CV884373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884373 vs. ExPASy Swiss-Prot
Match: DPS1_DICDI (Decaprenyl-diphosphate synthase OS=Dictyostelium discoideum GN=coq1 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.193e-34 Identity = 76/196 (38.78%), Postives = 124/196 (63.27%), Query Frame = -2 Query: 185 EVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 772 +V ++T + LV GE MQ S+ S D Y+QKTY KT SLI+NSC++ A+L+G + + ++ ++GKNLGLA+Q++DD+LD+TG++ GK + D+ G+ TAP+L+A +EFPQL ++++ F + +V+ A + S+GI+KTR L ++ LP+ ++SR L+ L+H V+TR K Sbjct: 269 DVTECMSTALAELVEGEFMQ--AKSNGVVSFDNYLQKTYLKTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQLEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLAIEYCNRAIQSLLKLPQ------SESRDLLITLSHIVVTRTK 456
BLAST of CV884373 vs. ExPASy Swiss-Prot
Match: DPS1_MOUSE (Decaprenyl-diphosphate synthase subunit 1 OS=Mus musculus GN=Pdss1 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.864e-34 Identity = 77/195 (39.49%), Postives = 123/195 (63.08%), Query Frame = -2 Query: 185 VVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 769 VV++LA V+E LV GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+ YGKN+G+A+QLIDDVLDFT S +GK + +D++ GI T P+LFA ++FP++ ++ + F +VD A +Y+ +S G+Q+T L I L + + D AL+ L+ V+TR+K Sbjct: 221 VVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLRPSTERD------ALIQLSESVLTRDK 409
BLAST of CV884373 vs. ExPASy Swiss-Prot
Match: COQ1_NEUCR (Probable hexaprenyl pyrophosphate synthetase, mitochondrial OS=Neurospora crassa GN=NCU02305 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.421e-33 Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = -2 Query: 185 EVVTLLATVVEHLVTGETMQM-TTSSDQRC------SMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 772 EVV LLATV+ +LV GE MQ+ T+ D++ ++ YY+QKTY KTASLIS SC+A ALL G A A+ YGKNLGLA+QL+DD+LD+T + LGK + +D+ G+ TAP+LFA + P+L +V + FE + A E + +S GI++TR L AI P++ +D L+++ + + RNK Sbjct: 253 EVVELLATVIANLVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLLFAWKTMPELGPLVGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEKAIEAISGFPDSEAKD------GLIEMAVKTLKRNK 449
BLAST of CV884373 vs. ExPASy Swiss-Prot
Match: DPS1_HUMAN (Decaprenyl-diphosphate synthase subunit 1 OS=Homo sapiens GN=PDSS1 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.166e-33 Identity = 74/195 (37.95%), Postives = 122/195 (62.56%), Query Frame = -2 Query: 185 VVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 769 V+++L V+E LV GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+ YGKN+G+A+QLIDDVLDFT S +GK + +D++ G+ T P+LFA ++FP++ ++ + F +VD A +Y+ +S G+Q+T L I L + + D AL+ L+ V+TR+K Sbjct: 227 VISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPERD------ALIQLSEIVLTRDK 415
BLAST of CV884373 vs. ExPASy Swiss-Prot
Match: COQ1_YARLI (Probable hexaprenyl pyrophosphate synthetase, mitochondrial OS=Yarrowia lipolytica GN=COQ1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.330e-31 Identity = 72/202 (35.64%), Postives = 126/202 (62.38%), Query Frame = -2 Query: 185 EVVTLLATVVEHLVTGETMQM------TTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 772 EV+ LL+T + +LV GE MQ+ + + + +YY+ KTY KTASL+S SC+A A+L+G + ++ +GKNLGL +Q++DD+LD++ + LGK + +D++ G+ TAP+LFA E++P+L ++++ F+ +V+ A + ++ G+ +TREL +D LP ++SR AL +LT +++ R+K Sbjct: 257 EVIELLSTTIANLVEGEFMQLKNTIVDNSEIANKATFEYYIHKTYLKTASLMSKSCRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLDYSEGESHLGKPAGADLKLGLATAPVLFAWEKYPELGDMIKRKFDGPGDVERARFLVQQADGLSRTRELAQKYCDEAVANLDLLP------YSESREALRNLTMKMMNRSK 452
BLAST of CV884373 vs. ExPASy Swiss-Prot
Match: PREA_SYNY3 (Prenyl transferase OS=Synechocystis sp. (strain PCC 6803) GN=preA PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.921e-30 Identity = 73/194 (37.63%), Postives = 117/194 (60.31%), Query Frame = -2 Query: 191 EVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXAIDSLPENNDEDVTKSRRALLDLTHRVITR 772 EVV LL+ V+ GE +Q D ++ Y++K+Y+KTASLI+NS KA +L+ +V ++YGK+LGLA+Q++DD+LDFT + LGK + SD+ G ITAP LFAME++P L ++E+ F + +++ ALE + + GI+++REL + L +++ R +LL+L V+ R Sbjct: 134 EVVKLLSEVIRDFAEGEILQSINRFDTDTDLETYLEKSYFKTASLIANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTSPTEVLGKPAGSDLISGNITAPALFAMEKYPLLGKLIEREFAQAGDLEQALELVEQGDGIRRSRELAANQAQLARQHLSVL------EMSAPRESLLELVDYVLGR 321
BLAST of CV884373 vs. ExPASy Swiss-Prot
Match: PREA_CYAPA (Prenyl transferase OS=Cyanophora paradoxa GN=preA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.798e-28 Identity = 62/179 (34.64%), Postives = 113/179 (63.13%), Query Frame = -2 Query: 236 EVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXAIDSLPENNDEDVTK 772 EVV L++ V+ GE + +++ Y++K++YKTASL++ S KA ALL+ VA ++YG++LGLA+Q++DD+LDFT ++ LGK S SD++ G +TAP+LFA+E+ +L ++++ F + + + L+ + +++ I+KTREL +++LP ++ ++ K Sbjct: 134 EVVKLISKVITDFAEGEIRRGLNQFKVDLTLEEYLEKSFYKTASLLAASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGKPSCSDLKKGNLTAPVLFALEQNSELIPLIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHAQVAIQCLENLPPSSSKEALK 312
BLAST of CV884373 vs. ExPASy Swiss-Prot
Match: PREA_PORPU (Prenyl transferase OS=Porphyra purpurea GN=preA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.832e-28 Identity = 69/194 (35.57%), Postives = 114/194 (58.76%), Query Frame = -2 Query: 191 EVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXAIDSLPENNDEDVTKSRRALLDLTHRVITR 772 EVV ++ V+ GE Q D S+D Y++K++YKTASL++ SC+ A+L +++ + YGK++GLA+Q++DDVLD G++ SLGK S +D +G +TAPILFA+ + +L ++++ F D ++ +AL + KS GI K ++L + LP++ +L +LTH +ITR Sbjct: 134 EVVKVITKVITDFAEGEIRQGLVHFDPSISIDDYIEKSFYKTASLVAASCRGAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAGSTKSLGKPSGADFMNGNLTAPILFALTQEGKLDQLIQREFSDERDISLALFLIKKSGGITKAKDLAKEQVQAALCCLQFLPKSAPVS------SLKELTHFIITR 321
BLAST of CV884373 vs. ExPASy Swiss-Prot
Match: DPS1_SCHPO (Decaprenyl-diphosphate synthase subunit 1 OS=Schizosaccharomyces pombe GN=dps1 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28 Identity = 72/202 (35.64%), Postives = 118/202 (58.42%), Query Frame = -2 Query: 185 EVVTLLATVVEHLVTGETMQMTTSSD------QRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 772 +V LLATV+ LV GE +Q+ + D ++ + DYY++K++ KTASLIS SCKA +L + VA A +YG+ +G A+QL+DDVLD+T +LGK + +D++ G+ TAP+LFA +++P+L ++ F S++ A + + I++T ++ LP+ + +R+AL L +VITR K Sbjct: 183 QVTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIVNRFNHPSDIQRARSLVECTDAIEQTITWAKEYIKKAKDSLLCLPD------SPARKALFALADKVITRKK 378
BLAST of CV884373 vs. ExPASy Swiss-Prot
Match: COQ1_YEAST (Hexaprenyl pyrophosphate synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=COQ1 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.988e-27 Identity = 67/179 (37.43%), Postives = 108/179 (60.34%), Query Frame = -2 Query: 185 MQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXAI-DSLPENNDEDVTKSRRALLDLTHRVITRNK 718 +Q++ + +YY+ KTY KTA+LIS SC+ A+L+G + V +D+G+NLG+ +QL+DD+LDFT + LGK S +D++ GI TAP+LFA +E P L ++ + F + +V+ ++ + GI KT+ L + DSLPE++ +R AL LT+ ++TR K Sbjct: 301 LQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPSLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESD------ARSALEFLTNSILTRRK 473 The following BLAST results are available for this feature:
BLAST of CV884373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884373 ID=CV884373; Name=CV884373; organism=Citrus sinensis; type=EST; length=773bpback to top |