CV884337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.482e-77 Identity = 149/165 (90.30%), Postives = 154/165 (93.33%), Query Frame = -3 Query: 362 NELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRSVPMAAAA 856 NELLYGESFPVSAEVLDSSF LPIGKAKIEREGKDVTITAFSK+VG +LKAAEIL KEGISAEVINLRSIRPLDR TINASVRKTNRLVTVEEGFPQHGVGAEIC SVIEESF YLDA VERI GADVPMPYA NLER+ VP VEDIVRAAKRAC+RSVP+AAAA Sbjct: 195 NELLYGESFPVSAEVLDSSFWLPIGKAKIEREGKDVTITAFSKMVGFALKAAEILEKEGISAEVINLRSIRPLDRPTINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDATVERIGGADVPMPYAGNLERLVVPHVEDIVRAAKRACHRSVPLAAAA 359
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 279.256 bits (713), Expect = 1.967e-74 Identity = 140/158 (88.61%), Postives = 151/158 (95.57%), Query Frame = -3 Query: 383 NELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRS 856 NELLYGESFP+S E LDSSFCLPIGKAKIEREGKDVTI FSK+VG +LKAAE LA+EGISAEVINLRSIRPLDR+TINASVRKT+RLVTVEEGFPQHGV AEICASV+EESFSYLDAPVERIAGADVPMPYAANLER+A+PQ+EDIVRA+KRACYRS Sbjct: 205 NELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVGFALKAAEKLAEEGISAEVINLRSIRPLDRATINASVRKTSRLVTVEEGFPQHGVCAEICASVVEESFSYLDAPVERIAGADVPMPYAANLERLALPQIEDIVRASKRACYRS 362
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.190e-49 Identity = 99/158 (62.66%), Postives = 124/158 (78.48%), Query Frame = -3 Query: 383 NELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRS 856 +ELLY F +S + D + +PIGKAK+EREGKDVTI FS+IV ++AAEILAKEGISAEVINLR+IRP+D TI S++KTN+LVTVEEG+ Q G+GAEI A ++E +F YLDAP+ERI GADVPMPYA+NLE A+ Q ++IV AAKR R+ Sbjct: 198 SELLYNYKFDLSDQEQDKEYLVPIGKAKVEREGKDVTIVGFSRIVSNCMEAAEILAKEGISAEVINLRTIRPIDAETIVNSLKKTNKLVTVEEGWAQSGIGAEISALMMEHAFDYLDAPIERICGADVPMPYASNLENAAMVQTQNIVNAAKRVTQRN 355
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.171e-44 Identity = 91/154 (59.09%), Postives = 115/154 (74.68%), Query Frame = -3 Query: 398 NELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 856 NEL+YG +F + AE F +PIGKAKIER+G +T+ A S+ VG L+AA +L+KEGI EVINLR+IRP+D I ASV KTN LVTVE G+PQ GVGAEICA ++E +F++LDAP R+ GADVPMPYA LE +VPQV+DI+ A K+ Sbjct: 202 NELMYGVAFELPAEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKVLEDNSVPQVKDIIFAVKK 355
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.375e-43 Identity = 92/154 (59.74%), Postives = 114/154 (74.03%), Query Frame = -3 Query: 398 NELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 856 NEL+YG F + +E F +PIGKAKIER+G VTI A S+ VG L+AA +L+KEGI EVINLR+IRP+D TI SV KTN LVTVE G+PQ GVGAEICA ++E +F++LDAP R+ GADVPMPYA LE +VPQV+DI+ A K+ Sbjct: 202 NELMYGVPFELPSEAQSKDFLIPIGKAKIERQGTHVTIVAHSRPVGHCLEAATVLSKEGIECEVINLRTIRPMDIETIEGSVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSVPQVKDIIFAIKK 355
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 3.063e-43 Identity = 89/154 (57.79%), Postives = 114/154 (74.03%), Query Frame = -3 Query: 398 NELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 856 NEL+YG +F + E F +PIGKAKIER+G +T+ A S+ VG L+AA +L+KEGI EVINLR+IRP+D I ASV KTN LVTVE G+PQ GVGAEICA ++E +F++LDAP R+ GADVPMPYA LE ++PQV+DI+ A K+ Sbjct: 202 NELMYGVAFELPTEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.911e-43 Identity = 87/154 (56.49%), Postives = 113/154 (73.38%), Query Frame = -3 Query: 398 NELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 856 NEL+YG F E F +PIGKAKIER+G +T+ + S+ VG L+AA +L+KEG+ EVIN+R+IRP+D TI ASV KTN LVTVE G+PQ GVGAEICA ++E +F++LDAP R+ GADVPMPYA LE ++PQV+DI+ A K+ Sbjct: 202 NELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 8.911e-43 Identity = 87/154 (56.49%), Postives = 113/154 (73.38%), Query Frame = -3 Query: 398 NELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKR 856 NEL+YG F E F +PIGKAKIER+G +T+ + S+ VG L+AA +L+KEG+ EVIN+R+IRP+D TI ASV KTN LVTVE G+PQ GVGAEICA ++E +F++LDAP R+ GADVPMPYA LE ++PQV+DI+ A K+ Sbjct: 202 NELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.422e-42 Identity = 88/158 (55.70%), Postives = 118/158 (74.68%), Query Frame = -3 Query: 389 NELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEIL-AKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACY 856 NE+LYG++FP+S E L F LP G AK+ER GKD+TI S V +L+AA+ L A G+ AEVINLRSIRPLD +TI ASV+KTNR+VTV++ + QHG+G+EI A ++E ++F YLDAPVER++ ADVPMPY+ +E +VP + +V AAK+ Y Sbjct: 207 NEILYGKTFPISKEALSEDFVLPFGLAKVERPGKDITIVGESISVVTALEAADKLKADYGVEAEVINLRSIRPLDINTIAASVKKTNRIVTVDQAYSQHGIGSEIAAQIMESDAFDYLDAPVERVSMADVPMPYSHPVEAASVPNADVVVAAAKKCLY 364
BLAST of CV884337 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 9.852e-42 Identity = 93/154 (60.39%), Postives = 111/154 (72.08%), Query Frame = -3 Query: 401 NELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKE-GISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFSYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 856 NELLYGESF +S E L F LP KAKIEREG D++I +++ V SL+AAEIL K+ G+SAEVINLRSIRPLD I +V+KTN L+TVE FP GVGAEI A V+E E+F YLDAP++R+ GADVP PYA LE A P IV+A K Sbjct: 208 NELLYGESFEISEEALSPEFTLPY-KAKIEREGTDISIVTYTRNVQFSLEAAEILQKKYGVSAEVINLRSIRPLDTEAIIKTVKKTNHLITVESTFPSFGVGAEIVAQVMESEAFDYLDAPIQRVTGADVPTPYAKELEDFAFPDTPTIVKAVK 360 The following BLAST results are available for this feature:
BLAST of CV884337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884337 ID=CV884337; Name=CV884337; organism=Citrus sinensis; type=EST; length=858bpback to top |