CX673503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX673503 vs. ExPASy Swiss-Prot
Match: CIA2_ARATH (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana GN=CIA2 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.354e-34 Identity = 94/200 (47.00%), Postives = 108/200 (54.00%), Query Frame = -2 Query: 274 GGKLELGFGMRSGMKALRQVDEGNWWNF-PIDVLQISPKF------------NNSSGTGNSNXXXXXXXXXXXXXXXXXXXXXXXXELPAKEESPIPKANSGELLLKLQYDDVLNAWSDKGSPFLDESLAPDGQGNDVSARLAQIDLFSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSS 834 G LG G+RS ALR+ D+ W +D QISP+ + G E + E++ LLKL YD VL AWSDK SPF DE + DV+ARLAQIDLF D G+REASVLRYKEKRRTRLFSKKIRYQVRK+NAD+RPRMKGRFVRRPN S Sbjct: 235 GFNFPLGLGLRS---ALRENDDTKLWKIHTVDFEQISPRIQTVKTETAISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLDYDGVLEAWSDKTSPFPDE--IQGSEAVDVNARLAQIDLFGDSGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRPNES 429
BLAST of CX673503 vs. ExPASy Swiss-Prot
Match: COL16_ARATH (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.852e-17 Identity = 54/119 (45.38%), Postives = 70/119 (58.82%), Query Frame = -2 Query: 271 LLLKLQYDDVLNAWSDKGSPFLDESLAPDGQGNDVSARLA---------------------QIDLFSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSSA 564 L+L+L YD V++ W +G P+ S P + D+S A F DGG REA V RY+EKRRTRLFSKKIRY+VRK+NA++RPRMKGRFV+R + +A Sbjct: 293 LMLRLNYDSVISTWGGQGPPW--SSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSGFGDGG-REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASLAA 408
BLAST of CX673503 vs. ExPASy Swiss-Prot
Match: COL7_ARATH (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.416e-16 Identity = 53/126 (42.06%), Postives = 69/126 (54.76%), Query Frame = -2 Query: 286 ESPIPKANSGELLLKLQYDDVLNAWSDKGSPF----------------------LDESLAPDGQGNDVSARLAQIDLFSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 597 E+ K L L+L Y V++AW + GSP+ ++ ++ DG R D G REA VLRYKEKRRTRLFSKKIRY+VRK+NA++RPR+KGRFV+R Sbjct: 266 EASNDKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGR----DGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387
BLAST of CX673503 vs. ExPASy Swiss-Prot
Match: COL6_ARATH (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana GN=COL6 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.119e-16 Identity = 50/112 (44.64%), Postives = 65/112 (58.04%), Query Frame = -2 Query: 286 LLLKLQYDDVLNAWSDKGSPF-------------------LDESLAPDGQGNDVSARLAQIDLFSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 564 L+L+L Y+ V++ W +G P+ + ES A N + DGG REA V RY+EKRRTRLFSKKIRY+VRK+NA++RPRMKGRFV+R Sbjct: 289 LMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHLGDAGDGG-REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 399
BLAST of CX673503 vs. ExPASy Swiss-Prot
Match: COL8_ARATH (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana GN=COL8 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.260e-14 Identity = 45/97 (46.39%), Postives = 56/97 (57.73%), Query Frame = -2 Query: 286 KLQYDDVLNAWSDKGSPFLDESLAPDGQGNDVSARLAQIDLFSDG-------GLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 555 +L Y++V+ AW + SP DV + L G REA V RY++KR+ RLF KKIRY+VRKVNAD+RPRMKGRFVRR Sbjct: 223 RLNYENVIAAWDKQESP------------RDVKNNTSSFQLVPPGIEEKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 307 The following BLAST results are available for this feature:
BLAST of CX673503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX673503 ID=CX673503; Name=CX673503; organism=Citrus sinensis; type=EST; length=850bpback to top |