CX673497

Overview
NameCX673497
Unique NameCX673497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX673497 vs. ExPASy Swiss-Prot
Match: XRI1_ARATH (Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 5.756e-30
Identity = 61/89 (68.54%), Postives = 73/89 (82.02%), Query Frame = -2 
Query:  492 RKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQRIHSPGSKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 758
            RKS  R  +KL SS+ YPFAFIKPCG+HG +TL DINQ+I +P +K K +I++P+   TSAFSGKPVVGKTKI TEGGKGSITIMRT+G
Sbjct:  212 RKSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAHIEEPAVIQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

HSP 2 Score: 23.0978 bits (48), Expect = 5.756e-30
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = -3 
Query:  758 TNVVQQQVTRTPRNVVFK 811
            T  VQ+ VTR+  NV+FK
Sbjct:  193 TREVQRPVTRSSPNVIFK 210
The following BLAST results are available for this feature:
BLAST of CX673497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
XRI1_ARATH5.756e-3068.54Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_23A08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-23A08-B15-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX673497 ID=CX673497; Name=CX673497; organism=Citrus sinensis; type=EST; length=816bp
AAATGATACAAGTGTTTCATTGATGAGCTGTAGCTTACAATATTGGACAA
GCTTTATAATAACAAATGCTTTGTGAAGAAGCTGACTATTTCTTCAAAGT
TTATGCGAAGCAAACAAGACCATCAGTGTTCAGCATTACTACTCTTCCAC
TTCATGTAAAATAATACATAGATATCAATTAAATTTGTTCTCATGAATGA
TGCCTATCGAGAAAATAAGCCAGACTGAATAGACAAGATTGTTAACATTA
ATGTCTAAAATCAAGGTCACATCACATTATCCATGTCTATTTGACACCTA
AAATTTCACTCAGATGCAAGAACAATTTACTCTGACTTATAAGTCCCAAA
AAAAGGGGAAGGAAAAAATCATTGCTATCTTCAATGTTAGATGGCCCTGG
ATAATAATACACATACCCCTCAACTAAGAACATTATGGGGCAAAGAAAAG
GGGCCACAAAAAGGGAAGTTTGAAAGACACCTATCTCCTCAACCTTTGGT
TCTCATAATTGTGATGCTGCCTTTTCCTCCTTCGGTGTGAATTTTAGTTT
TACCAACAACAGGCTTCCCAGAAAAAGCTGAAGTAGGATAAGCTGAGGGA
TCATCAATATTCTGTTTTGTCTTTGAACCTGGAGAGTGGATCCGCTGGTT
TATGTCATTCAAAGTAACATCTCCATGGATTCCACATGGCTTAATAAAGG
CAAATGGATAGGCAACTGAAGAAGCTAATTTAGTCGGGGTTCTTAACAAA
GACTTTCTTTAAAAACAACATTTCGAGGAGTTCTAGTAACCTGCTGTTGA
ACCACATTAGTATTAC
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