CX673495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX673495 vs. ExPASy Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.009e-69 Identity = 148/226 (65.49%), Postives = 156/226 (69.03%), Query Frame = 2 Query: 158 MPSHPNFPFSLPRWIIELFRSKKVXXXXXXXXXXXXXXXXXXPISN--------HNFECYACTQVGVPVFHSTSCDQAHQPEWEASAGSSLVPIQARSKILGPKDGR--PASATFAHVFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRGGAP-CLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYVRSLKGF 802 MPSHPNF F RWI LF K S+ + ECYACTQVGVP FHSTSCDQAH PEW ASAGSSLVPIQ S + P R F V DPRSKRVQR NRA LLARGM+LAVDPLFFYALSIGR P CLYMDGA AA+VTVLRTC+DAVHL+H+WLQFRLAYVSRESLVVGCGKLVWDPRAIASHY RSL GF Sbjct: 1 MPSHPNFIF---RWI-GLFSDKFRRQTTGIDENSNLQINGGDSSSSGSDETPVLSSVECYACTQVGVPAFHSTSCDQAHAPEWRASAGSSLVPIQEGS-VPNPARTRFRRLKGPFGEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVLRTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYARSLTGF 221
BLAST of CX673495 vs. ExPASy Swiss-Prot
Match: CNG18_ARATH (Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16 Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 446 DGRPASATFAH-VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRGGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYVRS 790 DG S + H + DP S V N FL+ ++L +DP +FY +G G CL +D +LAA VT RT D HL H++++FR A+V+R S V G G+LV D R IA Y+++ Sbjct: 28 DGSQFSVLWRHQILDPDSNIVTYWNHVFLITSILALFLDPFYFYVPYVG--GPACLSIDISLAATVTFFRTVADIFHLLHIFMKFRTAFVARSSRVFGRGELVMDSREIAMRYLKT 141
BLAST of CX673495 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16 Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 2 Query: 443 KDGRPASATFAHVFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRGGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYVRS 790 +D ++ T ++ +P+ +Q N+ FL A ++LA+DPLFFY + I G CL + L +VLRT +DA ++ H+ QFR AY+S S V G G+LV DP+AIA Y+ S Sbjct: 56 RDSNSSTTTQKNIINPQGSFLQNWNKIFLFASVIALAIDPLFFY-IPIVDGERHCLNLHRNLEIAASVLRTFIDAFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSS 170
BLAST of CX673495 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16 Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 479 VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRGGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYV 784 +FDP+ K + NR F+++ ++++VDPLFFY + G+ C+ +D LA T LRT VD +L + LQFR AY++ S V G G+LV DP IA Y+ Sbjct: 90 IFDPQDKTLLVWNRLFVISCILAVSVDPLFFYLPIVDNSGSSCIGIDTKLAVTTTTLRTIVDVFYLTRMALQFRTAYIAPSSRVFGRGELVIDPAKIAERYL 191
BLAST of CX673495 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16 Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 2 Query: 332 VPVFHSTSCDQAHQPEWEASAGSSLVPIQARSKILGPKDGR----PASATFAH--VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGR-GGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYVRS 790 VP+F ST+ Q ++P ++++++ P+ GR P + + DP V + NR FL ++L VDPLFF+ S+ R G + C+ D L ++T RT D ++ H+ ++FR AYVSR S V G G+LV DP+ IA Y+RS Sbjct: 26 VPLFKSTTAPFMKQ---------EVLPKKSKTRLKIPRFGRFKVFPENFEIERDKILDPGGDAVLQWNRVFLFWCLVALYVDPLFFFLSSVKRIGRSSCMTTDLKLGIVITFFRTLADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLRS 176
BLAST of CX673495 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.187e-15 Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 440 PKDGRPASATFAHVFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRGGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYVRS 790 P +S T ++ +P+ +Q N+ FL A ++LA+DPLFFY + I CL +D L ++LRT +DA ++ H+ QFR AY++ S V G G+LV D +AIA Y+ S Sbjct: 55 PDHKETSSVTRKNIINPQDSFLQNWNKIFLFACVVALAIDPLFFY-IPIVDSARHCLTLDSKLEIAASLLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYLSS 170
BLAST of CX673495 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.162e-15 Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 2 Query: 479 VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRGGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYVR 787 +FDP+ K + N+ F+ + ++++VDPLF Y L A C+ +D LA IVT +RT +D+ +LFH+ L+FR AYV+ S V G G+LV DP IA Y++ Sbjct: 103 IFDPQDKFLLLCNKLFVASCILAVSVDPLFLY-LPFINDKAKCVGIDRKLAIIVTTIRTVIDSFYLFHMALRFRTAYVAPSSRVFGRGELVIDPAQIAKRYLQ 204
BLAST of CX673495 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.100e-15 Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 2 Query: 479 VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRGGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYVR 787 +FDP+ K + N+ F+ + ++++VDPLF Y L + C+ +D LA I T LRT +DA +LFH+ L+FR A+V+ S V G G+LV DP IA Y++ Sbjct: 103 IFDPQDKFLLLCNKLFVTSCILAVSVDPLFLY-LPFVKDNEKCIGIDRKLAIIATTLRTVIDAFYLFHMALRFRTAFVAPSSRVFGRGELVIDPAQIAKRYLQ 204
BLAST of CX673495 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.582e-14 Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 479 VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRGGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYV 784 +FDP+ K + NR F+++ ++++VDPLFFY L I C+ +D LA T LRT +D +L + LQFR AY++ S V G G+LV DP IA Y+ Sbjct: 97 IFDPQDKTLLLWNRMFVISCILAVSVDPLFFY-LPIVDNSKNCIGIDSKLAVTTTTLRTIIDVFYLTRMALQFRTAYIAPSSRVFGRGELVIDPAKIAERYL 197
BLAST of CX673495 vs. ExPASy Swiss-Prot
Match: CNG20_ARATH (Probable cyclic nucleotide-gated ion channel 20, chloroplastic OS=Arabidopsis thaliana GN=CNGC20 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.339e-13 Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 479 VFDPRSKRVQRLNRAFLLARGMSLAVDPLFFYALSIGRGGAPCLYMDGALAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYVR 787 + +P +K VQ + F L+ +++ +DPLFF+ + + C+ +D + +R+ D + ++ LQFRLAYV+RES VVG G+LV P+ IA HY++ Sbjct: 192 IMNPHAKEVQTWTKFFALSCLLAIFIDPLFFFLIKVQEQNK-CIMIDWPMTKAFVAVRSVTDVIFTMNILLQFRLAYVARESTVVGAGQLVSHPKKIALHYLK 293 The following BLAST results are available for this feature:
BLAST of CX673495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX673495 ID=CX673495; Name=CX673495; organism=Citrus sinensis; type=EST; length=802bpback to top |