EY665230

Overview
NameEY665230
Unique NameEY665230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length530
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665230 vs. ExPASy Swiss-Prot
Match: IDH6_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.219e-14
Identity = 36/47 (76.60%), Postives = 45/47 (95.74%), Query Frame = 2 
Query:    2 RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 142
            RHL+L+ +A++I +AI++TIAEGKYRTADLGGSSTT+DFTKAICDHL
Sbjct:  328 RHLKLNKQAEQIHSAIINTIAEGKYRTADLGGSSTTTDFTKAICDHL 374
[Close]
BLAST of EY665230 vs. ExPASy Swiss-Prot
Match: IDH5_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.633e-14
Identity = 34/47 (72.34%), Postives = 45/47 (95.74%), Query Frame = 2 
Query:    2 RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 142
            RHL+ +++A++I +AI++TIAEGKYRTADLGGSSTT++FTKAICDHL
Sbjct:  328 RHLKFNEQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374
The following BLAST results are available for this feature:
BLAST of EY665230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
IDH6_ARATH1.219e-1476.60Isocitrate dehydrogenase [NAD] catalytic subunit 6... [more]
IDH5_ARATH4.633e-1472.34Isocitrate dehydrogenase [NAD] catalytic subunit 5... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665230 ID=EY665230; Name=EY665230; organism=Citrus sinensis; type=EST; length=530bp
GCGCCATTTGGAGCTCCATGACAAGGCTGATAGGATCCAAAATGCTATCC
TGAGCACAATTGCAGAGGGGAAGTATCGAACTGCAGATCTTGGTGGCTCT
TCAACGACATCAGATTTCACAAAGGCAATCTGCGATCATCTTTAAATATT
TCTTTCTACATAGAATTTGAATTCATGTTCAAGATTTACATTCTACCTTT
CTTTTTTTGAGCAATGTCTCAAATTTGTTTTTTCCCCCCCTTTTTAAAGT
GTTTTTCTTTGAGGGGAATGAGACCCATCACCTTGGTGACTATGTAGAAG
TTTTTTTCTGATGAAACTGTTCAGCCAGAGTGTATATGGCCGTCCTCAGA
AAAGGTATTTATACGGCAATATTTATTTCCTTGCTGCCTGTGAAATTCCA
AAAATTGAACTAACCGATTTTGAGAAAATTGTTCACAGCGTGTGTTGTCT
ATGTTTCCATATTTTGATAATTGGTTCTGTAACATGAAATAAAGCATCAT
CATGTGGTGAAAAAAAAAAAAAAAAAAAAA
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