EY665221

Overview
NameEY665221
Unique NameEY665221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665221 vs. ExPASy Swiss-Prot
Match: RL71_ARATH (60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.368e-17
Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 2 
Query:   98 EKKKHRGLWR*RGKPSWELGKYGHGQKNKKSKVEDIKRPEQFIKQYRDQELDLIRMKQRGKRSKKVIGKPKSKLLFIIRIQGTSDMHPKTKKI 376
            +K+K+R       K   ELG  G     KK KV DIKRPE F+ ++R +E+D+IRMKQR KR K      KS L+FIIRIQG +DMHPKTK+I
Sbjct:   18 KKRKNRDELAFIRKKQLELGNSG----KKKKKVSDIKRPEDFVHEFRAKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRI 106

HSP 2 Score: 23.8682 bits (50), Expect = 1.368e-17
Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 3 
Query:   42 MAEEAAQQPLAFVAETVLKKRKSTE 116
            MAEE A+  L ++ E VLKKRK+ +
Sbjct:    1 MAEEEAKG-LDYIPEIVLKKRKNRD 24
The following BLAST results are available for this feature:
BLAST of EY665221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RL71_ARATH1.368e-1752.6960S ribosomal protein L7-1 OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665221 ID=EY665221; Name=EY665221; organism=Citrus sinensis; type=EST; length=938bp
CCACGCGTCCGCTTCTATTCTTTCTTTTCTCTGCAAGCGATATGGCGGAA
GAAGCGGCACAGCAACCGTTAGCTTTTGTGGCGGAAACGGTGCTGAAGAA
AAGAAAAAGCACCGAGGGCTTTGGCGCTGACGAGGAAAGCCCAGTTGGGA
ATTGGGAAAGTATGGCCATGGACAGAAGAACAAGAAGAGCAAAGTTGAGG
ATATCAAAAGACCCGAGCAATTTATCAAACAGTATAGGGACCAGGAATTG
GACCTTATCCGAATGAAACAAAGAGGGAAAAGGTCGAAAAAAGTGATCGG
GAAGCCAAAATCTAAGTTGCTTTTTATTATACGCATACAAGGCACAAGTG
ATATGCACCCTAAGACTAAGAAGATTTCTCTACAACCTTAGATTGGAGGA
GAATTTTCAGTGGTGTCCTTGTCAGGGCTAATGATGGTATGTTAGAAAGT
GGCTGCAAAAGGTGGAACCCCTATGTCCACATTATGGGATATCCCTAATC
TTTGGCAAAATGTGAAGGGAGCCTAATTTAACAAAGAAAGGGGTTTATGG
CAACTTGGTAGAATGGGGCAAAAGATTTTCCCTCTCCACAAGACCGATAA
ACCTTTTATTTGAAACTGAACGTTTGGGGGAAAAATTAGGGGCAATTTAT
ATTGCCAATTTGGAGGGGAATATTTAGATAACATGGGAAAAATAGAGCCC
CAAGTGGTTTGGGAGCCCCTCCTTTTTTTTAAAAAGAAGAGGGTCCATCC
CACAACCTTTTCTCGGGGGGGGTCCCCTTTTTTATAAACCCCGTTAGAAA
AACAAATGCCCCGGGGAGAAAGAGGAGGGAGGAGTTTTGGTGCAACAAGG
GGGTGAAAGAAAAAAAAAAACAAAACCCCGCGAATATTCTCATAGGGGGG
GGCACGCGGGGAATGGGGGGAAAATGAAAAACACTGCC
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