CV719928

Overview
NameCV719928
Unique NameCV719928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV719928 vs. ExPASy Swiss-Prot
Match: Y2006_MYCTU (Uncharacterized glycosyl hydrolase Rv2006/MT2062 OS=Mycobacterium tuberculosis GN=Rv2006 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.559e-14
Identity = 48/148 (32.43%), Postives = 80/148 (54.05%), Query Frame = 1
Query:  319 IARHPSALSKFEEIVNASKGKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSV 762
            I+  P AL  + ++     G++  +FLD+DGTL+ IVE P+ A + +   EA+R +A   P A+++GR    V + VK+ GL+ AGSHG ++  P        G+H      A+  +  + E    L +  + I GA VE+ +F ++V
Sbjct:  260 ISTIPDALQVYSQLKRLLTGRRPAVFLDFDGTLSDIVERPEAATLVDGAAEALRALAAQCPVAVISGRDLADVRNRVKVDGLWLAGSHGFELVAPD-------GSHHQNA-AATAAIDGLAEAAAQLADALREIAGAVVEHKRFAVAV 399          
BLAST of CV719928 vs. ExPASy Swiss-Prot
Match: OTSB_MYCUA (Trehalose-phosphate phosphatase OS=Mycobacterium ulcerans (strain Agy99) GN=otsB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12
Identity = 48/145 (33.10%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  325 RHPSALSKFEEIVNASKGKKI---VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKF 750
            RH S L    + +    G  +    +F D+DGTL+ IV+DPD A  T     A++ +A   P AI++GR    V   V L G++YAGSHG ++  P        G H    + A+  +P++ +    L ++  SIPG  VE+ +F
Sbjct:  122 RHMSELPDALQALGRPDGLTVPRPAVFFDFDGTLSEIVDDPDAATPTAGAVAALQQLAAQCPVAILSGRDLADVSQRVGLPGIWYAGSHGFELTAPD-------GTHH-QNEAAAAAIPVLEQAAAQLRDRLGSIPGVMVEHKRF 258          
BLAST of CV719928 vs. ExPASy Swiss-Prot
Match: OTSB_MYCMM (Trehalose-phosphate phosphatase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=otsB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12
Identity = 48/145 (33.10%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  325 RHPSALSKFEEIVNASKGKKI---VMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKF 750
            RH S L    + +    G  +    +F D+DGTL+ IV+DPD A  T     A++ +A   P AI++GR    V   V L G++YAGSHG ++  P        G H    + A+  +P++ +    L ++  SIPG  VE+ +F
Sbjct:  122 RHMSELPDALQALGRPDGLTVPRPAVFFDFDGTLSEIVDDPDAATPTAGAVAALQQLAAQCPVAILSGRDLADVSQRVGLPGIWYAGSHGFELTAPD-------GTHH-QNEAAAAAIPVLEQAAAQLRDRLGSIPGVMVEHKRF 258          
BLAST of CV719928 vs. ExPASy Swiss-Prot
Match: OTSB_MYCTU (Trehalose-phosphate phosphatase OS=Mycobacterium tuberculosis GN=otsB PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.050e-12
Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 1
Query:  391 MFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSV 762
            +F D+DGTL+ IVEDPD A++     EA++ +A   P A+++GR    V   V L G++YAGSHG ++  P        G H      A+  +P++ +    L ++    PG  VE+ +F ++V
Sbjct:  144 VFFDFDGTLSDIVEDPDAAWLAPGALEALQKLAARCPIAVLSGRDLADVTQRVGLPGIWYAGSHGFELTAPD-------GTHH-QNDAAAAAIPVLKQAAAELRQQLGPFPGVVVEHKRFGVAV 259          
BLAST of CV719928 vs. ExPASy Swiss-Prot
Match: OTSB_MYCTA (Trehalose-phosphate phosphatase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=otsB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.050e-12
Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 1
Query:  391 MFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSV 762
            +F D+DGTL+ IVEDPD A++     EA++ +A   P A+++GR    V   V L G++YAGSHG ++  P        G H      A+  +P++ +    L ++    PG  VE+ +F ++V
Sbjct:  144 VFFDFDGTLSDIVEDPDAAWLAPGALEALQKLAARCPIAVLSGRDLADVTQRVGLPGIWYAGSHGFELTAPD-------GTHH-QNDAAAAAIPVLKQAAAELRQQLGPFPGVVVEHKRFGVAV 259          
BLAST of CV719928 vs. ExPASy Swiss-Prot
Match: OTSB_MYCBP (Trehalose-phosphate phosphatase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=otsB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.050e-12
Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 1
Query:  391 MFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSV 762
            +F D+DGTL+ IVEDPD A++     EA++ +A   P A+++GR    V   V L G++YAGSHG ++  P        G H      A+  +P++ +    L ++    PG  VE+ +F ++V
Sbjct:  144 VFFDFDGTLSDIVEDPDAAWLAPGALEALQKLAARCPIAVLSGRDLADVTQRVGLPGIWYAGSHGFELTAPD-------GTHH-QNDAAAAAIPVLKQAAAELRQQLGPFPGVVVEHKRFGVAV 259          
BLAST of CV719928 vs. ExPASy Swiss-Prot
Match: OTSB_MYCBO (Trehalose-phosphate phosphatase OS=Mycobacterium bovis GN=otsB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.050e-12
Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 1
Query:  391 MFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSV 762
            +F D+DGTL+ IVEDPD A++     EA++ +A   P A+++GR    V   V L G++YAGSHG ++  P        G H      A+  +P++ +    L ++    PG  VE+ +F ++V
Sbjct:  144 VFFDFDGTLSDIVEDPDAAWLAPGALEALQKLAARCPIAVLSGRDLADVTQRVGLPGIWYAGSHGFELTAPD-------GTHH-QNDAAAAAIPVLKQAAAELRQQLGPFPGVVVEHKRFGVAV 259          
BLAST of CV719928 vs. ExPASy Swiss-Prot
Match: OTSB_MYCLE (Trehalose-phosphate phosphatase OS=Mycobacterium leprae GN=otsB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.373e-11
Identity = 40/124 (32.26%), Postives = 66/124 (53.23%), Query Frame = 1
Query:  391 MFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSV 762
            +F D+DGTL+ IV+DPD A       EA++ +A + P AI++GR    V   + + G++Y+GSHG +   P        G H      A   +P++ +    L ++   IPG  VE+ +F ++V
Sbjct:  178 VFFDFDGTLSDIVDDPDSARPVPGATEALQKLATHCPVAILSGRDLADVIKRIGVPGIWYSGSHGFESTAPD-------GTHH-QNDAAEATIPILEQAATQLRDQLGPIPGVMVEHKRFGVAV 293          
BLAST of CV719928 vs. ExPASy Swiss-Prot
Match: OTSB_MYCPA (Trehalose-phosphate phosphatase OS=Mycobacterium paratuberculosis GN=otsB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11
Identity = 41/129 (31.78%), Postives = 69/129 (53.49%), Query Frame = 1
Query:  376 GKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSV 762
            G+   +F D+DGTL+ IV+DPD A        A+  +A   P A+++GR    V   V + G++YAGSHG ++  P        G+H      A+  +P++ +    L ++  +IPG  VE+ +F ++V
Sbjct:  139 GRHPAVFFDFDGTLSDIVDDPDAARPVAGATAALTRLAARCPVAVLSGRDLADVTKRVGVLGIWYAGSHGFELTAPD-------GSHH-QNDDAAAAIPVLAQAAGRLRDELGAIPGVVVEHKRFGVAV 259          
BLAST of CV719928 vs. ExPASy Swiss-Prot
Match: OTSB_MYCA1 (Trehalose-phosphate phosphatase OS=Mycobacterium avium (strain 104) GN=otsB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11
Identity = 41/129 (31.78%), Postives = 69/129 (53.49%), Query Frame = 1
Query:  376 GKKIVMFLDYDGTLAPIVEDPDRAFMTNEMREAVRDVARYFPTAIVTGRCRDKVFSFVKLAGLYYAGSHGMDIEGPSKKRRYKKGNHGVLCQPASEFLPMINEVYQTLLEKTKSIPGAKVENNKFCLSV 762
            G+   +F D+DGTL+ IV+DPD A        A+  +A   P A+++GR    V   V + G++YAGSHG ++  P        G+H      A+  +P++ +    L ++  +IPG  VE+ +F ++V
Sbjct:  139 GRHPAVFFDFDGTLSDIVDDPDAARPVAGATAALTRLAARCPVAVLSGRDLADVTKRVGVPGIWYAGSHGFELTAPD-------GSHH-QNDDAAAAIPVLAQAAGRLSDELGTIPGVVVEHKRFGVAV 259          
The following BLAST results are available for this feature:
BLAST of CV719928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
Y2006_MYCTU5.559e-1432.43Uncharacterized glycosyl hydrolase Rv2006/MT2062 O... [more]
OTSB_MYCUA1.048e-1233.10Trehalose-phosphate phosphatase OS=Mycobacterium u... [more]
OTSB_MYCMM1.048e-1233.10Trehalose-phosphate phosphatase OS=Mycobacterium m... [more]
OTSB_MYCTU3.050e-1233.87Trehalose-phosphate phosphatase OS=Mycobacterium t... [more]
OTSB_MYCTA3.050e-1233.87Trehalose-phosphate phosphatase OS=Mycobacterium t... [more]
OTSB_MYCBP3.050e-1233.87Trehalose-phosphate phosphatase OS=Mycobacterium b... [more]
OTSB_MYCBO3.050e-1233.87Trehalose-phosphate phosphatase OS=Mycobacterium b... [more]
OTSB_MYCLE3.373e-1132.26Trehalose-phosphate phosphatase OS=Mycobacterium l... [more]
OTSB_MYCPA9.813e-1131.78Trehalose-phosphate phosphatase OS=Mycobacterium p... [more]
OTSB_MYCA19.813e-1131.78Trehalose-phosphate phosphatase OS=Mycobacterium a... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0012K15_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0012K15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV719928 ID=CV719928; Name=CV719928; organism=Citrus sinensis; type=EST; length=762bp
CTCAAACTTTCAGAGAATATGACTAACCAAAATGTGGTGGTGGCTTCTGA
CCGGAAATCCAGTAATATCGGGTTGAAGATCACAGTCACCTTAACCAACT
CCACTCTGTTTTCGGGGGCCGATTCAAAGGCCCTGCCTGCTCCCGGCGGT
GGCTTCATCACCATTTCTCGGAAGAATATCCTTAGAAAGCCTACTGACAC
TACTGATCAAGGAGGCAACAAAATAAATGCATGGGTTAATTCATTGCGAG
CTTCTTCTCCTACTCGTCTGAAATCCTCTATTGCTTTTTCACCCCAAACT
GAAGAGCAAACTTCTTGGATTGCTCGTCATCCCTCAGCTTTGAGCAAGTT
TGAAGAGATAGTGAATGCTTCAAAAGGGAAAAAGATTGTTATGTTCCTCG
ATTATGATGGCACCTTGGCGCCTATAGTGGAAGACCCAGATCGAGCTTTC
ATGACCAACGAGATGAGAGAAGCTGTAAGGGACGTCGCTAGATATTTTCC
CACAGCTATAGTGACTGGAAGGTGCAGAGACAAGGTTTTTAGCTTTGTAA
AGCTAGCGGGGCTTTACTACGCTGGAAGCCACGGCATGGACATCGAGGGG
CCTTCCAAAAAGCGTCGATACAAGAAAGGTAATCACGGGGTTCTGTGCCA
GCCCGCGAGTGAATTTCTACCGATGATTAATGAGGTGTACCAGACATTGT
TAGAGAAAACAAAATCAATTCCGGGGGCTAAAGTTGAAAACAACAAGTTC
TGTCTCTCCGTA
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