CX673402

Overview
NameCX673402
Unique NameCX673402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKTC_SOLTU (Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.513e-97
Identity = 181/250 (72.40%), Postives = 197/250 (78.80%), Query Frame = 2
Query:   56 MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASRPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANE 805
            MASSSS TLSQ + +     HG + SS    L+ ST                             +AS     AAVETLE  TDAA+VEKSVNTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEVM+YNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLK+FRQWGS+ PGHPENFETPG+EVTTGPLGQG+ANAVGLA+AEKHLAAR+NKPD +IVDHYTYVILGDGCQMEGI+NE
Sbjct:    1 MASSSSLTLSQVIFSPSLPRHG-SSSSSSPSLSFSTFSGLKSTPFTSSHRRILPSTTVTKQQFSVRAS-----AAVETLE-KTDAAIVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKSFRQWGSRIPGHPENFETPGVEVTTGPLGQGIANAVGLAVAEKHLAARFNKPDAEIVDHYTYVILGDGCQMEGISNE 243          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKTC_SPIOL (Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 7.771e-94
Identity = 162/185 (87.57%), Postives = 173/185 (93.51%), Query Frame = 2
Query:  254 ASRPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            AS  +RAAAVE LE++    LVEKSVNTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+MRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV E+DLK FRQWGS+ PGHPENFETPG+EVTTGPLGQG+ANAVGLALAEKHLAAR+NKPD +IVDHYTYVILGDGCQMEGIA EA
Sbjct:   60 ASAVVRAAAVEALESTDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVLEEDLKTFRQWGSRIPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDAEIVDHYTYVILGDGCQMEGIAQEA 244          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKTC_MAIZE (Transketolase, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.500e-92
Identity = 158/178 (88.76%), Postives = 171/178 (96.07%), Query Frame = 2
Query:  278 AVETLE-TSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            AVETL+  +    L+EKSVNTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV+E+DLK FRQWGS+TPGHPENFETPG+EVTTGPLGQG+ANAVGLALAEKHLAAR+NKPD++IVDHYTYVILGDGCQMEGIANEA
Sbjct:    2 AVETLQGKAATGELLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEA 179          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT7_CRAPL (Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.865e-85
Identity = 142/165 (86.06%), Postives = 158/165 (95.76%), Query Frame = 2
Query:  314 LVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            LV KSVNTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVLSAGHGCMLQYALLHL+GYDSV+E+DLK+ RQWGS+TP HPENFETPG+EVTTGPLGQG+A+AVGLA+AEKHLAARYNKP  +IVDHYTYVILGDGCQMEG++NEA
Sbjct:   13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVLSAGHGCMLQYALLHLSGYDSVKEEDLKSLRQWGSRTPAHPENFETPGVEVTTGPLGQGIASAVGLAVAEKHLAARYNKPGFEIVDHYTYVILGDGCQMEGVSNEA 177          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKTA_CRAPL (Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.287e-80
Identity = 141/184 (76.63%), Postives = 156/184 (84.78%), Query Frame = 2
Query:  257 SRPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            S P  AAA E         LV KSVNTIRFLA+DAVE   SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVLSAGHG ML Y LLHLAGYDSV+ +DLK  RQWGSKTP HPENFETPG+EVTTGPLGQG+ +AVGLALAEKHL ARYNKPD ++VDHYTY+ILGDGCQMEGI+NEA
Sbjct:    7 SSPSAAAAAE---------LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVLSAGHGAMLLYGLLHLAGYDSVKVEDLKGLRQWGSKTPAHPENFETPGVEVTTGPLGQGVGSAVGLALAEKHLGARYNKPDFEMVDHYTYMILGDGCQMEGISNEA 181          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_ANASP (Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.685e-72
Identity = 126/166 (75.90%), Postives = 142/166 (85.54%), Query Frame = 2
Query:  311 ALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +L E S+N IRFLAVDA+EKA SGHPGLPMG APM  +L++  MRYNPKNP WFNRDRFVLSAGHG MLQYALL+L GYDSV  +D+K FRQW SKTPGHPENF T G+EVTTGPLGQG+AN VGLA+AE HLAA++NKPD  IVDHYTYVILGDGC MEG++ EA
Sbjct:    7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFVLSAGHGSMLQYALLYLTGYDSVSIEDIKQFRQWESKTPGHPENFMTAGVEVTTGPLGQGIANGVGLAIAEAHLAAKFNKPDAKIVDHYTYVILGDGCNMEGVSGEA 172          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_BACHD (Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.252e-59
Identity = 108/161 (67.08%), Postives = 130/161 (80.75%), Query Frame = 2
Query:  326 SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +VNTIR L++D+VEKANSGHPG+PMG APM   L+ + M +NP NP W NRDRFVLSAGHG ML Y+LLHL GYD +  ++L+NFRQWGSKTPGHPE   TPG+E TTGPLGQG+A AVG+A+AE+HLAA YN+   +IVDHYTY I GDG  MEG++ EA
Sbjct:    9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGHGSMLLYSLLHLTGYD-LSLEELQNFRQWGSKTPGHPEYGHTPGVEATTGPLGQGVAMAVGMAMAERHLAATYNRDGYNIVDHYTYTICGDGDLMEGVSAEA 168          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_STRP8 (Transketolase OS=Streptococcus pyogenes serotype M18 GN=tkt PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.084e-58
Identity = 106/167 (63.47%), Postives = 133/167 (79.64%), Query Frame = 2
Query:  311 ALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPY-WFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            A+ + +VNT+R L++DA++ ANSGHPGLPMG APM ++L++  M  NPK    W NRDRF+LSAGHG  + Y+LLHLAGYD +  +DLKNFRQWGSKTPGHPE   T G+E TTGPLGQG+ANAVG+A+AE HLAA++NKP  DIVDHYT+ + GDG  MEG++ EA
Sbjct:   73 AIDQLAVNTVRTLSMDAIQAANSGHPGLPMGAAPMAYVLWNHFMNINPKTSRNWSNRDRFILSAGHGSAMLYSLLHLAGYD-LSVEDLKNFRQWGSKTPGHPEVNHTDGVEATTGPLGQGIANAVGMAMAEAHLAAKFNKPGFDIVDHYTFALNGDGDLMEGVSQEA 238          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_STRP6 (Transketolase OS=Streptococcus pyogenes serotype M6 GN=tkt PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.084e-58
Identity = 106/167 (63.47%), Postives = 133/167 (79.64%), Query Frame = 2
Query:  311 ALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPY-WFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            A+ + +VNT+R L++DA++ ANSGHPGLPMG APM ++L++  M  NPK    W NRDRF+LSAGHG  + Y+LLHLAGYD +  +DLKNFRQWGSKTPGHPE   T G+E TTGPLGQG+ANAVG+A+AE HLAA++NKP  DIVDHYT+ + GDG  MEG++ EA
Sbjct:   73 AIDQLAVNTVRTLSMDAIQAANSGHPGLPMGAAPMAYVLWNHFMNINPKTSRNWSNRDRFILSAGHGSAMLYSLLHLAGYD-LSVEDLKNFRQWGSKTPGHPEVNHTDGVEATTGPLGQGIANAVGMAMAEAHLAAKFNKPGFDIVDHYTFALNGDGDLMEGVSQEA 238          
BLAST of CX673402 vs. ExPASy Swiss-Prot
Match: TKT_BACSU (Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.611e-57
Identity = 104/163 (63.80%), Postives = 130/163 (79.75%), Query Frame = 2
Query:  320 EKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNDIVDHYTYVILGDGCQMEGIANEA 808
            +KSV TIR L++DA+EKANSGHPG+PMG APM + L+ + M  +P NP WFNRDRFVLSAGHG  L Y++LHL+G+D +  +DLK FRQWGSKTPGHPE   T G++ TTGPLGQG+A AVG+A+AE+HLA  YN+   ++VDHYTY I GDG  MEGI++EA
Sbjct:    6 KKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSGFD-LSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLMEGISSEA 167          
The following BLAST results are available for this feature:
BLAST of CX673402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
TKTC_SOLTU1.513e-9772.40Transketolase, chloroplastic OS=Solanum tuberosum ... [more]
TKTC_SPIOL7.771e-9487.57Transketolase, chloroplastic OS=Spinacia oleracea ... [more]
TKTC_MAIZE2.500e-9288.76Transketolase, chloroplastic OS=Zea mays PE=1 SV=1[more]
TKT7_CRAPL3.865e-8586.06Transketolase 7 OS=Craterostigma plantagineum GN=T... [more]
TKTA_CRAPL1.287e-8076.63Transketolase 10 OS=Craterostigma plantagineum GN=... [more]
TKT_ANASP1.685e-7275.90Transketolase OS=Anabaena sp. (strain PCC 7120) GN... [more]
TKT_BACHD1.252e-5967.08Transketolase OS=Bacillus halodurans GN=tkt PE=3 S... [more]
TKT_STRP83.084e-5863.47Transketolase OS=Streptococcus pyogenes serotype M... [more]
TKT_STRP63.084e-5863.47Transketolase OS=Streptococcus pyogenes serotype M... [more]
TKT_BACSU2.611e-5763.80Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_22D12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-22D12-H24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX673402 ID=CX673402; Name=CX673402; organism=Citrus sinensis; type=EST; length=808bp
CAGAAGGCGAGCTCAACCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAACA
AAACAATGGCTTCTTCATCTTCTTTCACTCTATCCCAAGCCCTTCTGACC
AGAGGCACTTCTCACCATGGCTTCACTCAATCATCAGAGCACCATCGTCT
CGCTCTCTCTACACTCTCTCTCCCTTCCTTTTCCGGCCTCAAATCCACCT
CCTCTTCCACCCTACGCACCCCCACCTCCCGCCGCCGCCTCTCCACCAGC
CAAGCCAGCCGACCCATCCGCGCAGCGGCCGTAGAAACACTCGAAACCTC
GACTGATGCCGCTTTGGTTGAGAAATCAGTCAACACCATTAGATTCTTGG
CTGTCGACGCCGTCGAGAAGGCCAATTCGGGTCACCCGGGATTGCCCATG
GGATGTGCTCCTATGGGTCATATTTTGTATGATGAGGTCATGAGATACAA
CCCCAAAAACCCCTACTGGTTTAACCGTGACCGCTTCGTTTTGTCCGCCG
GACATGGCTGCATGTTGCAGTACGCTCTCCTTCACCTTGCTGGTTACGAC
AGTGTCCAGGAAGACGACTTGAAGAATTTCAGACAATGGGGAAGCAAAAC
ACCTGGACACCCAGAAAACTTTGAGACACCTGGTATCGAGGTCACAACTG
GTCCTCTTGGCCAGGGTATGGCGAATGCTGTTGGTTTGGCTCTTGCAGAG
AAGCATTTGGCTGCTCGATACAACAAGCCTGACAATGATATTGTTGACCA
CTACACATATGTGATACTGGGAGATGGGTGCCAAATGGAGGGGATTGCAA
ATGAGGCT
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