CX301073

Overview
NameCX301073
Unique NameCX301073
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301073 vs. ExPASy Swiss-Prot
Match: NAT13_PONAB (N-acetyltransferase NAT13 OS=Pongo abelii GN=NAT13 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.503e-28
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 1
Query:    1 LSTFIFHTDIVVGAVCCRIEPHPEPSPSPQAKRMYIMTLGVLAPYRNLGLGTKLLNFVFGLLKDKPFITSLYLHVQTSNQEAINFYKQFGFEIKDTITDYYKNIEPPDCYLLEKTITPSSSQ 366
            L+   +  DI VGAVCCR++       S   KR+YIMTLG LAPYR LG+GTK+LN V  + +      ++YLHVQ SN+ AI+FY++FGFEI +T  +YYK IEP D ++L+K +   S Q
Sbjct:   45 LAKLAYFNDIAVGAVCCRVDH------SQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQ 160          
BLAST of CX301073 vs. ExPASy Swiss-Prot
Match: NAT13_MOUSE (N-acetyltransferase NAT13 OS=Mus musculus GN=Nat13 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.503e-28
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 1
Query:    1 LSTFIFHTDIVVGAVCCRIEPHPEPSPSPQAKRMYIMTLGVLAPYRNLGLGTKLLNFVFGLLKDKPFITSLYLHVQTSNQEAINFYKQFGFEIKDTITDYYKNIEPPDCYLLEKTITPSSSQ 366
            L+   +  DI VGAVCCR++       S   KR+YIMTLG LAPYR LG+GTK+LN V  + +      ++YLHVQ SN+ AI+FY++FGFEI +T  +YYK IEP D ++L+K +   S Q
Sbjct:   45 LAKLAYFNDIAVGAVCCRVDH------SQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQ 160          
BLAST of CX301073 vs. ExPASy Swiss-Prot
Match: NAT13_HUMAN (N-acetyltransferase 13 OS=Homo sapiens GN=NAT13 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.503e-28
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 1
Query:    1 LSTFIFHTDIVVGAVCCRIEPHPEPSPSPQAKRMYIMTLGVLAPYRNLGLGTKLLNFVFGLLKDKPFITSLYLHVQTSNQEAINFYKQFGFEIKDTITDYYKNIEPPDCYLLEKTITPSSSQ 366
            L+   +  DI VGAVCCR++       S   KR+YIMTLG LAPYR LG+GTK+LN V  + +      ++YLHVQ SN+ AI+FY++FGFEI +T  +YYK IEP D ++L+K +   S Q
Sbjct:   45 LAKLAYFNDIAVGAVCCRVDH------SQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQ 160          
BLAST of CX301073 vs. ExPASy Swiss-Prot
Match: NAT13_BOVIN (N-acetyltransferase 13 OS=Bos taurus GN=NAT13 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.503e-28
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 1
Query:    1 LSTFIFHTDIVVGAVCCRIEPHPEPSPSPQAKRMYIMTLGVLAPYRNLGLGTKLLNFVFGLLKDKPFITSLYLHVQTSNQEAINFYKQFGFEIKDTITDYYKNIEPPDCYLLEKTITPSSSQ 366
            L+   +  DI VGAVCCR++       S   KR+YIMTLG LAPYR LG+GTK+LN V  + +      ++YLHVQ SN+ AI+FY++FGFEI +T  +YYK IEP D ++L+K +   S Q
Sbjct:   45 LAKLAYFNDIAVGAVCCRVDH------SQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQ 160          
BLAST of CX301073 vs. ExPASy Swiss-Prot
Match: NAT13_XENTR (N-acetyltransferase NAT13 OS=Xenopus tropicalis GN=nat13 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.111e-27
Identity = 60/120 (50.00%), Postives = 81/120 (67.50%), Query Frame = 1
Query:    1 LSTFIFHTDIVVGAVCCRIEPHPEPSPSPQAKRMYIMTLGVLAPYRNLGLGTKLLNFVFGLLKDKPFITSLYLHVQTSNQEAINFYKQFGFEIKDTITDYYKNIEPPDCYLLEKTITPSS 360
            L+   +  DI VGAVCCR++       S   KR+YIMTLG LAPYR LG+GTK+LN V  + +      ++YLHVQ SN+ AI+FY++FGFEI +T  +YYK IEP D ++L+K +  SS
Sbjct:   44 LAKLAYFNDIAVGAVCCRVDH------SQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKISS 157          
BLAST of CX301073 vs. ExPASy Swiss-Prot
Match: NAT13_XENLA (N-acetyltransferase NAT13 OS=Xenopus laevis GN=nat13 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.111e-27
Identity = 60/120 (50.00%), Postives = 81/120 (67.50%), Query Frame = 1
Query:    1 LSTFIFHTDIVVGAVCCRIEPHPEPSPSPQAKRMYIMTLGVLAPYRNLGLGTKLLNFVFGLLKDKPFITSLYLHVQTSNQEAINFYKQFGFEIKDTITDYYKNIEPPDCYLLEKTITPSS 360
            L+   +  DI VGAVCCR++       S   KR+YIMTLG LAPYR LG+GTK+LN V  + +      ++YLHVQ SN+ AI+FY++FGFEI +T  +YYK IEP D ++L+K +  SS
Sbjct:   45 LAKLAYFNDIAVGAVCCRVDH------SQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKISS 158          
BLAST of CX301073 vs. ExPASy Swiss-Prot
Match: NAT13_DANRE (N-acetyltransferase NAT13 OS=Danio rerio GN=nat13 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.231e-27
Identity = 58/116 (50.00%), Postives = 80/116 (68.97%), Query Frame = 1
Query:    1 LSTFIFHTDIVVGAVCCRIEPHPEPSPSPQAKRMYIMTLGVLAPYRNLGLGTKLLNFVFGLLKDKPFITSLYLHVQTSNQEAINFYKQFGFEIKDTITDYYKNIEPPDCYLLEKTI 348
            L+   +  DI VGAVCCR++       S   KR+YIMTLG LAPYR LG+GTK+LN V  + +      ++YLHVQ SN+ AI+FY++FGFEI +T  +YYK IEP D ++L+K++
Sbjct:   44 LAKLAYFNDIAVGAVCCRVDH------SQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYQKFGFEIIETKKNYYKRIEPADAHVLQKSL 153          
BLAST of CX301073 vs. ExPASy Swiss-Prot
Match: SAN_DROME (Probable N-acetyltransferase san OS=Drosophila melanogaster GN=san PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.159e-25
Identity = 55/116 (47.41%), Postives = 75/116 (64.66%), Query Frame = 1
Query:    1 LSTFIFHTDIVVGAVCCRIEPHPEPSPSPQAKRMYIMTLGVLAPYRNLGLGTKLLNFVFGLLKDKPFITSLYLHVQTSNQEAINFYKQFGFEIKDTITDYYKNIEPPDCYLLEKTI 348
            L+   ++ DIVVGAVCCRI+       +   +R+YIMTLG L+PYR LG+GT +   +    +      S++LHVQ +N  AI FYK+FGFEI DT   YYK IEP D ++L+KT+
Sbjct:   45 LAKLAYYNDIVVGAVCCRIDN------TENQRRLYIMTLGCLSPYRRLGIGTVMFEHIMNFAEKDGNFDSIFLHVQINNNGAIEFYKKFGFEIVDTKEQYYKRIEPADAHVLQKTL 154          
The following BLAST results are available for this feature:
BLAST of CX301073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
NAT13_PONAB8.503e-2849.18N-acetyltransferase NAT13 OS=Pongo abelii GN=NAT13... [more]
NAT13_MOUSE8.503e-2849.18N-acetyltransferase NAT13 OS=Mus musculus GN=Nat13... [more]
NAT13_HUMAN8.503e-2849.18N-acetyltransferase 13 OS=Homo sapiens GN=NAT13 PE... [more]
NAT13_BOVIN8.503e-2849.18N-acetyltransferase 13 OS=Bos taurus GN=NAT13 PE=2... [more]
NAT13_XENTR1.111e-2750.00N-acetyltransferase NAT13 OS=Xenopus tropicalis GN... [more]
NAT13_XENLA1.111e-2750.00N-acetyltransferase NAT13 OS=Xenopus laevis GN=nat... [more]
NAT13_DANRE3.231e-2750.00N-acetyltransferase NAT13 OS=Danio rerio GN=nat13 ... [more]
SAN_DROME5.159e-2547.41Probable N-acetyltransferase san OS=Drosophila mel... [more]
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Properties
Property NameValue
Genbank descriptionC08005D12SK PhyRootSw1 Citrus sinensis cDNA clone C08005D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301073 ID=CX301073; Name=CX301073; organism=Citrus sinensis; type=EST; length=503bp
TTATCAACTTTCATATTTCATACTGATATCGTGGTTGGTGCTGTATGTTG
CAGAATAGAACCACATCCAGAACCCAGCCCTTCTCCACAGGCCAAAAGAA
TGTACATCATGACTTTGGGTGTTCTGGCACCTTATCGTAACCTTGGGCTT
GGAACTAAACTGCTCAATTTTGTGTTTGGTCTTCTGAAAGACAAGCCATT
TATCACATCCCTCTATTTGCATGTGCAAACCAGCAACCAAGAAGCAATCA
ATTTCTACAAGCAGTTTGGATTTGAAATCAAAGATACTATCACCGACTAC
TACAAGAATATCGAGCCTCCAGATTGTTATCTTTTGGAAAAGACAATCAC
CCCTTCTTCTTCTCAATAATAATACAAATATAATCTAGTAACCAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
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