CX673366

Overview
NameCX673366
Unique NameCX673366
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX673366 vs. ExPASy Swiss-Prot
Match: HFA4A_ARATH (Heat stress transcription factor A-4a OS=Arabidopsis thaliana GN=HSFA4A PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.658e-50
Identity = 118/261 (45.21%), Postives = 162/261 (62.07%), Query Frame = -1
Query:  137 EQERQGXESQMQLLRERFQLMEQRQQKMVSFVGRALQKPGLESNFGAHL-ENHDRKRRLPRIDYFYDEANIEDNPMGTSQIVAGADSADISSSNME-KFEQLESSMTFWENIVQDVGQSCFQPNS--SLELDESTSCADSPAISCIQLNVDARPKSPG----IDMNSEPAVTAATEPVPSKEPETATTIPLQAGVNDVFWEQFLTENPGSSDAQEVQSERKECDGKKNENKPADHGKFWWNMRNVNSLAEQMGHLTPAERT 895
            ++ER+  E Q++ L+ER Q ME+RQ+ MVSFV + L+KPGL  N    + E ++RKRR PRI++F DE  +E+N   T  +V    S   SS   E + EQLESS+  WEN+V D  +S  Q  S  +L++DES++  +SP +SCIQL+VD+R KSP     IDMN EP  +     V +  P      P  AG ND FW+QF +ENPGS++ +EVQ ERK+   K          K WWN RNVN++ EQ+GHLT +ER+
Sbjct:  153 DEEREVFEMQVKELKERLQHMEKRQKTMVSFVSQVLEKPGLALNLSPCVPETNERKRRFPRIEFFPDEPMLEENK--TCVVVREEGSTSPSSHTREHQVEQLESSIAIWENLVSDSCESMLQSRSMMTLDVDESSTFPESPPLSCIQLSVDSRLKSPPSPRIIDMNCEPDGSKEQNTVAAPPP------PPVAGANDGFWQQFFSENPGSTEQREVQLERKDDKDKAGVRTE----KCWWNSRNVNAITEQLGHLTSSERS 401          
BLAST of CX673366 vs. ExPASy Swiss-Prot
Match: HFA4C_ARATH (Heat stress transcription factor A-4c OS=Arabidopsis thaliana GN=HSFA4C PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.719e-37
Identity = 98/244 (40.16%), Postives = 136/244 (55.74%), Query Frame = -1
Query:  167 EQERQGXESQMQLLRERFQLMEQRQQKMVSFVGRALQKPGLESNFGAHLENHDRKRRLPRIDYFYDEANIEDNPMGTSQIVAGADSADISSSNMEKFEQLESSMTFWENIVQDVGQSCFQPNSSLELDESTSCADSPAISCIQLNV-DARPKSPGIDMNSEPAVTAATEPVPSKEPETATTIPLQAGVNDVFWEQFLTENPGSSDAQEVQSERKECDGKKNENKPADHGKFWWNMRNVNSLAEQ 895
            EQER+  E Q+  L++R Q MEQ Q+ +V++V + L KPGL  N    LENH+R++R             ++N            S   SSS++E+ E+LESS+TFWEN+V +  +     +SS++ D + S           L++ D RPKS  IDMNSEP VT  T P P            + GVND FWEQ LTENPGS++ QEVQSER++     N NK  +   +WWN  NVN++ E+
Sbjct:  150 EQERKEFELQVTTLKDRLQHMEQHQKSIVAYVSQVLGKPGLSLN----LENHERRKR-----------RFQEN------------SLPPSSSHIEQVEKLESSLTFWENLVSESCEKSGLQSSSMDHDAAES----------SLSIGDTRPKSSKIDMNSEPPVTV-TAPAP------------KTGVNDDFWEQCLTENPGSTEQQEVQSERRDVGNDNNGNKIGNQRTYWWNSGNVNNITEK 343          
BLAST of CX673366 vs. ExPASy Swiss-Prot
Match: HFA4B_ORYSJ (Heat stress transcription factor A-4b OS=Oryza sativa subsp. japonica GN=HSFA4B PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.545e-35
Identity = 94/293 (32.08%), Postives = 144/293 (49.15%), Query Frame = -1
Query:  137 ESQMQLLRERFQLMEQRQQKMVSFVGRALQKPGLESNFGAHLENHDRKRRLPRIDYFYDEANIEDNPMGTSQIVAGADSADISSSNMEKFEQLESSMTFWENIVQDVGQ----------------------------------------------SCFQPNSSLELDESTSCADSPAISCIQLNVDARPKSPGIDMNSEPAVTAATEPVPSKEPETATTIPLQAGVNDVFWEQFLTENPGSSDA-QEVQSERKECDGKKNENKPADHGKFWWNMRNVNSLAEQMGHLTPAERT 874
            E +MQ L E+  ++E +Q+ ++S+V   ++ PG  S+F    ++H +KRRLP    F+++AN ++N +    +     ++   +   E F+++ESS+   EN +++  +                                                   +SS ++ ESTSCA+SP I  +   VD R K   ID+NSEPAV   TE  PS++        +  G ND FW+QFLTE PGSSDA QE QSER++   K +E K  D    WW  RNV  + E++G LT  E+T
Sbjct:  155 EKRMQALEEKLFVVEDQQRSLISYVREIVKAPGFLSSFVQQQDHHRKKRRLPIPISFHEDANTQENQIMPCDLT----NSPAQTFYRESFDKMESSLNSLENFLREASEEFGNDISYDDGVPGPSSTVVLTELHSPGESDPRVSSPPTRMRTSSAGAGDSHSSRDVAESTSCAESPPIPQMHSRVDTRAKVSEIDVNSEPAV---TETGPSRDQPAEEPPAVTPGANDGFWQQFLTEQPGSSDAHQEAQSERRDGGNKVDEMKSGDRQHLWWGKRNVEQITEKLGLLTSTEKT 440          
BLAST of CX673366 vs. ExPASy Swiss-Prot
Match: HFA4D_ORYSJ (Heat stress transcription factor A-4d OS=Oryza sativa subsp. japonica GN=HSFA4D PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.502e-11
Identity = 78/302 (25.83%), Postives = 119/302 (39.40%), Query Frame = -1
Query:  137 QMQLLRERFQLMEQRQQKMVSFVGRALQ-KPGLESNFGAHLENHDRKRRLPRIDYFYDE-ANIEDNPMGTSQIV---AGADSADISSSNMEKFEQLESSMTFWENIVQDVGQSC-----------------------------------------FQPNS----------SLELDESTSCADSPAISCIQLNVDARPK--SPGIDMNSEPAVTAATEPVPSKEPETATTIPLQAGVNDVFWEQFLTENPGSSDAQEVQSERKECDGKKNENKPADHGKFWWNMRNVNSLAEQMGHLTPAERT 868
            QMQ +  R   MEQRQ+ +V+ +   LQ + G  S+     ++  +KRR+P++D F D+ A  E+  +   Q +   A A    +  +N E F+++E S+   E + Q    +C                                           P+S          S EL ES     SP +   ++  D          D+NSE A +  T    + E E +         NDVFWE+FLTE P S   +  + E  + D K        H     +   V+ + EQMGHL  AE+T
Sbjct:  165 QMQAMEGRLVAMEQRQKNIVASLCEMLQRRGGAVSSSLLESDHFSKKRRVPKMDLFVDDCAAGEEQKVFQFQGIGTDAPAMPPVLPVTNGEAFDRVELSLVSLEKLFQRANDACTAAEEMYSHGHGGTEPSTAICPEEMNTAPMETGIDLQLPASLHPSSPNTGNAHLHLSTELTESPGFVQSPELPMAEIREDIHVTRYPTQADVNSEIASSTDTSQDGTSETEAS-----HGPTNDVFWERFLTETPRSCLDESERQESPKDDVKAELGCNGFH-----HREKVDQITEQMGHLASAEQT 456          
The following BLAST results are available for this feature:
BLAST of CX673366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
HFA4A_ARATH3.658e-5045.21Heat stress transcription factor A-4a OS=Arabidops... [more]
HFA4C_ARATH2.719e-3740.16Heat stress transcription factor A-4c OS=Arabidops... [more]
HFA4B_ORYSJ2.545e-3532.08Heat stress transcription factor A-4b OS=Oryza sat... [more]
HFA4D_ORYSJ1.502e-1125.83Heat stress transcription factor A-4d OS=Oryza sat... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_22C04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-22C04-E8-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX673366 ID=CX673366; Name=CX673366; organism=Citrus sinensis; type=EST; length=898bp
TTTTTACACACACCAAAAAAAAAGTAACTTAAAGAGGGAATATCTATTTA
TTGTCAAATCCAACCAATAATACCCAAAAAAAAGTAACGTAAGATACTAA
GGCATTAAAAGCTAGGAAAACAACCAAACAATATCAAGTCCTCTCTGCAG
GGGTAAGATGGCCCATCTGTTCTGCAAGACTATTTACATTCCTCATATTC
CACCAAAACTTGCCATGATCGGCAGGTTTGTTTTCATTCTTTTTGCCATC
ACATTCCTTTCTTTCTGACTGAACTTCCTGGGCGTCAGAAGAACCAGGAT
TCTCAGTCAAAAATTGTTCCCAAAACACATCATTGACCCCAGCTTGCAGA
GGAATGGTGGTTGCAGTCTCTGGCTCCTTTGAAGGAACAGGCTCTGTAGC
TGCAGTCACAGCAGGCTCTGAGTTCATGTCAATTCCAGGAGATTTAGGGC
GAGCATCAACATTAAGTTGTATGCAAGATATAGCTGGACTATCTGCACAA
CTTGTAGATTCATCCAACTCCAAGCTTGAATTAGGTTGGAAGCAACTTTG
ACCAACGTCTTGAACAATATTCTCCCAAAATGTCATGGAGGACTCCAACT
GCTCAAACTTCTCCATGTTCGAAGAAGAAATATCAGCACTATCAGCACCT
GCTACAATTTGGGAAGTCCCCATCGGATTGTCTTCAATGTTGGCTTCATC
ATAGAAGTAATCAATTCTTGGCAGCCTTCTCTTCCTATCATGATTCTCCA
AGTGCGCCCCGAAATTTGACTCAAGTCCGGGTTTTTGCAAGGCTCGACCT
ACAAAAGACACCATCTTCTGCTGCCTCTGTTCCATCAGTTGAAAACGCTC
CCTCAAAAGCTGCATTTGCGACTCANATCCTTGCCGCTCCTGCTCATG
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