CX673366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX673366 vs. ExPASy Swiss-Prot
Match: HFA4A_ARATH (Heat stress transcription factor A-4a OS=Arabidopsis thaliana GN=HSFA4A PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.658e-50 Identity = 118/261 (45.21%), Postives = 162/261 (62.07%), Query Frame = -1 Query: 137 EQERQGXESQMQLLRERFQLMEQRQQKMVSFVGRALQKPGLESNFGAHL-ENHDRKRRLPRIDYFYDEANIEDNPMGTSQIVAGADSADISSSNME-KFEQLESSMTFWENIVQDVGQSCFQPNS--SLELDESTSCADSPAISCIQLNVDARPKSPG----IDMNSEPAVTAATEPVPSKEPETATTIPLQAGVNDVFWEQFLTENPGSSDAQEVQSERKECDGKKNENKPADHGKFWWNMRNVNSLAEQMGHLTPAERT 895 ++ER+ E Q++ L+ER Q ME+RQ+ MVSFV + L+KPGL N + E ++RKRR PRI++F DE +E+N T +V S SS E + EQLESS+ WEN+V D +S Q S +L++DES++ +SP +SCIQL+VD+R KSP IDMN EP + V + P P AG ND FW+QF +ENPGS++ +EVQ ERK+ K K WWN RNVN++ EQ+GHLT +ER+ Sbjct: 153 DEEREVFEMQVKELKERLQHMEKRQKTMVSFVSQVLEKPGLALNLSPCVPETNERKRRFPRIEFFPDEPMLEENK--TCVVVREEGSTSPSSHTREHQVEQLESSIAIWENLVSDSCESMLQSRSMMTLDVDESSTFPESPPLSCIQLSVDSRLKSPPSPRIIDMNCEPDGSKEQNTVAAPPP------PPVAGANDGFWQQFFSENPGSTEQREVQLERKDDKDKAGVRTE----KCWWNSRNVNAITEQLGHLTSSERS 401
BLAST of CX673366 vs. ExPASy Swiss-Prot
Match: HFA4C_ARATH (Heat stress transcription factor A-4c OS=Arabidopsis thaliana GN=HSFA4C PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.719e-37 Identity = 98/244 (40.16%), Postives = 136/244 (55.74%), Query Frame = -1 Query: 167 EQERQGXESQMQLLRERFQLMEQRQQKMVSFVGRALQKPGLESNFGAHLENHDRKRRLPRIDYFYDEANIEDNPMGTSQIVAGADSADISSSNMEKFEQLESSMTFWENIVQDVGQSCFQPNSSLELDESTSCADSPAISCIQLNV-DARPKSPGIDMNSEPAVTAATEPVPSKEPETATTIPLQAGVNDVFWEQFLTENPGSSDAQEVQSERKECDGKKNENKPADHGKFWWNMRNVNSLAEQ 895 EQER+ E Q+ L++R Q MEQ Q+ +V++V + L KPGL N LENH+R++R ++N S SSS++E+ E+LESS+TFWEN+V + + +SS++ D + S L++ D RPKS IDMNSEP VT T P P + GVND FWEQ LTENPGS++ QEVQSER++ N NK + +WWN NVN++ E+ Sbjct: 150 EQERKEFELQVTTLKDRLQHMEQHQKSIVAYVSQVLGKPGLSLN----LENHERRKR-----------RFQEN------------SLPPSSSHIEQVEKLESSLTFWENLVSESCEKSGLQSSSMDHDAAES----------SLSIGDTRPKSSKIDMNSEPPVTV-TAPAP------------KTGVNDDFWEQCLTENPGSTEQQEVQSERRDVGNDNNGNKIGNQRTYWWNSGNVNNITEK 343
BLAST of CX673366 vs. ExPASy Swiss-Prot
Match: HFA4B_ORYSJ (Heat stress transcription factor A-4b OS=Oryza sativa subsp. japonica GN=HSFA4B PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.545e-35 Identity = 94/293 (32.08%), Postives = 144/293 (49.15%), Query Frame = -1 Query: 137 ESQMQLLRERFQLMEQRQQKMVSFVGRALQKPGLESNFGAHLENHDRKRRLPRIDYFYDEANIEDNPMGTSQIVAGADSADISSSNMEKFEQLESSMTFWENIVQDVGQ----------------------------------------------SCFQPNSSLELDESTSCADSPAISCIQLNVDARPKSPGIDMNSEPAVTAATEPVPSKEPETATTIPLQAGVNDVFWEQFLTENPGSSDA-QEVQSERKECDGKKNENKPADHGKFWWNMRNVNSLAEQMGHLTPAERT 874 E +MQ L E+ ++E +Q+ ++S+V ++ PG S+F ++H +KRRLP F+++AN ++N + + ++ + E F+++ESS+ EN +++ + +SS ++ ESTSCA+SP I + VD R K ID+NSEPAV TE PS++ + G ND FW+QFLTE PGSSDA QE QSER++ K +E K D WW RNV + E++G LT E+T Sbjct: 155 EKRMQALEEKLFVVEDQQRSLISYVREIVKAPGFLSSFVQQQDHHRKKRRLPIPISFHEDANTQENQIMPCDLT----NSPAQTFYRESFDKMESSLNSLENFLREASEEFGNDISYDDGVPGPSSTVVLTELHSPGESDPRVSSPPTRMRTSSAGAGDSHSSRDVAESTSCAESPPIPQMHSRVDTRAKVSEIDVNSEPAV---TETGPSRDQPAEEPPAVTPGANDGFWQQFLTEQPGSSDAHQEAQSERRDGGNKVDEMKSGDRQHLWWGKRNVEQITEKLGLLTSTEKT 440
BLAST of CX673366 vs. ExPASy Swiss-Prot
Match: HFA4D_ORYSJ (Heat stress transcription factor A-4d OS=Oryza sativa subsp. japonica GN=HSFA4D PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.502e-11 Identity = 78/302 (25.83%), Postives = 119/302 (39.40%), Query Frame = -1 Query: 137 QMQLLRERFQLMEQRQQKMVSFVGRALQ-KPGLESNFGAHLENHDRKRRLPRIDYFYDE-ANIEDNPMGTSQIV---AGADSADISSSNMEKFEQLESSMTFWENIVQDVGQSC-----------------------------------------FQPNS----------SLELDESTSCADSPAISCIQLNVDARPK--SPGIDMNSEPAVTAATEPVPSKEPETATTIPLQAGVNDVFWEQFLTENPGSSDAQEVQSERKECDGKKNENKPADHGKFWWNMRNVNSLAEQMGHLTPAERT 868 QMQ + R MEQRQ+ +V+ + LQ + G S+ ++ +KRR+P++D F D+ A E+ + Q + A A + +N E F+++E S+ E + Q +C P+S S EL ES SP + ++ D D+NSE A + T + E E + NDVFWE+FLTE P S + + E + D K H + V+ + EQMGHL AE+T Sbjct: 165 QMQAMEGRLVAMEQRQKNIVASLCEMLQRRGGAVSSSLLESDHFSKKRRVPKMDLFVDDCAAGEEQKVFQFQGIGTDAPAMPPVLPVTNGEAFDRVELSLVSLEKLFQRANDACTAAEEMYSHGHGGTEPSTAICPEEMNTAPMETGIDLQLPASLHPSSPNTGNAHLHLSTELTESPGFVQSPELPMAEIREDIHVTRYPTQADVNSEIASSTDTSQDGTSETEAS-----HGPTNDVFWERFLTETPRSCLDESERQESPKDDVKAELGCNGFH-----HREKVDQITEQMGHLASAEQT 456 The following BLAST results are available for this feature:
BLAST of CX673366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX673366 ID=CX673366; Name=CX673366; organism=Citrus sinensis; type=EST; length=898bpback to top |