CX673360

Overview
NameCX673360
Unique NameCX673360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX673360 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.107e-44
Identity = 113/290 (38.97%), Postives = 155/290 (53.45%), Query Frame = 3
Query:    3 QTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFV-XXXXXXXXXXXXXSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARF--TPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDP-AGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDL-SGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQ 857
            Q+ P+F+P  S SF+T+PC S LC+ L S  C+  N C Y   YGDGS T G   TETLTF    +  +  GCG +N+G                 S P+Q       KFSYC+    +S  PS+++ G  A S TA    T L+ + ++ TFYY+ L G+SVG   +  I  S F L+   G GG+IIDSGT++T     AY ++R  F +  +        S FD CF   S  + +++PT V+HF G D+ LP+ NY I   S+G  C A   +  G+SI GNIQQQ
Sbjct:  132 QSTPIFNPQGSSSFSTLPCSSQLCQALSSPTCSN-NFCQYTYGYGDGSETQGSMGTETLTFGSVSIPNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLD---VTKFSYCMTPIGSST-PSNLLLGSLANSVTAGSPNTTLIQSSQIPTFYYITLNGLSVGSTRL-PIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSSSGFDLCFQTPSDPSNLQIPTFVMHFDGGDLELPSENYFIS-PSNGLICLAMGSSSQGMSIFGNIQQQ 414          
BLAST of CX673360 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.096e-40
Identity = 111/290 (38.28%), Postives = 154/290 (53.10%), Query Frame = 3
Query:    3 QTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFV-XXXXXXXXXXXXXSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSA--VSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDL-SGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAF-AGTMSGLSIIGNIQQQ 857
            Q  P+F+P  S SF+T+PC S  C+ L S  CN  N C Y   YGDGS T G  +TET TF  + V  +A GCG DN+G                 S P+Q G     +FSYC+    +S+ PS++  G +A  V   +  T L+ +    T+YY+ L GI+VGG ++ GI +S F+L   G GG+IIDSGT++T L + AY A+  AF    +        S   TCF   S  + V+VP + + F G  ++L   N LI   + G  C A  + +  G+SI GNIQQQ
Sbjct:  133 QPTPIFNPQDSSSFSTLPCESQYCQDLPSETCNN-NECQYTYGYGDGSTTQGYMATETFTFETSSVPNIAFGCGEDNQGFGQGNGAGLIGMGWGPLSLPSQLG---VGQFSYCMTSYGSSS-PSTLALGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNL-GIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQFDGGVLNLGEQNILIS-PAEGVICLAMGSSSQLGISIFGNIQQQ 415          
The following BLAST results are available for this feature:
BLAST of CX673360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR8.107e-4438.97Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR1.096e-4038.28Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_22B09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-22B09-D18-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX673360 ID=CX673360; Name=CX673360; organism=Citrus sinensis; type=EST; length=862bp
CTCAAACCGACCCTGTCTTCGACCCTGCCAAGTCCCGCTCGTTTGCTACC
GTACCCTGTCGGTCCCCTTTGTGCCGCAAGCTCGACTCTTCTGGCTGTAA
CCGCAGGAACACGTGTCTTTACCAAGTCTCCTACGGAGACGGTTCTATCA
CCGTCGGTGATTTTTCCACTGAAACGCTGACGTTTCGTGGCACCAGAGTT
GCGCGCGTGGCCCTCGGTTGTGGACACGACAATGAGGGCCTCTTCGTTGC
TGCTGCGGGCTTATTGGGGCTCGGTCGTGGGAGGTTGTCATTTCCAACTC
AAACCGGTCGCCGGTTCAACCGTAAGTTTTCTTACTGTTTAGTGGACCGA
TCCACTTCTGCTAAACCTTCATCGATGGTATTCGGTGACTCGGCCGTTTC
ACGAACCGCCCGGTTCACTCCGTTACTCGCAAACCCTAAGCTCGACACAT
TCTACTATGTTGAACTAGTTGGAATCAGCGTCGGCGGTGCTCATGTCCGC
GGCATCACTGCTTCTTTGTTCAAACTCGATCCGGCCGGTAACGGTGGGGT
CATCATAGACTCGGGTACGTCCGTGACCCGTTTGACCCGACCCGCTTACA
TCGCATTGCGTGATGCTTTCCGAGCTGGAGCATCCTCCTTGAAGCGTGCG
CCAGACTTTTCGCTGTTTGATACGTGCTTCGATTTGTCGGGAAAGACGGA
AGTGAAGGTGCCCACGGTGGTGTTGCATTTCAGAGGTGCAGATGTGTCGT
TGCCGGCGACTAATTATCTAATACCCGTGGATAGTAGCGGAACATTTTGC
TTTGCATTTGCAGGAACCATGAGCGGGTTGTCGATAATTGGAAATATTCA
GCAACAGGGGCT
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