CX673278

Overview
NameCX673278
Unique NameCX673278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX673278 vs. ExPASy Swiss-Prot
Match: NDRB_DICDI (Probable serine/threonine-protein kinase ndrB OS=Dictyostelium discoideum GN=ndrB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.063e-14
Identity = 33/95 (34.74%), Postives = 57/95 (60.00%), Query Frame = -2
Query:  592 KLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRKMLSSKDINFVGYTYKNFEIVND 876
            + L +   R+G  G +EI++HP+FKG++W +L + +   IP+++   DT NF+ +EE              R+ ++S DI F+GYTY+NF+ + D
Sbjct:  414 RFLTDPMTRIGFNGVEEIQSHPFFKGVDWRRLRETRPPIIPQLSSPTDTSNFDHYEEEQQPEPMQPVQSKSRRKITSFDIPFIGYTYRNFDAMRD 508          
BLAST of CX673278 vs. ExPASy Swiss-Prot
Match: CBK1_PNECA (Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii GN=CBK1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.633e-13
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = -2
Query:  598 KLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRKMLSSKDIN--FVGYTYKNFEIV 876
            KLL + +QRLG  GA++IK HP+F+G+ WD + +I A FIP++    DT  FE+ +   N I  ++      K+ S  D N  FVGYTYK F+++
Sbjct:  408 KLLTSADQRLGRYGANDIKLHPFFRGVNWDTIREINAPFIPQLKSITDTSYFEEIDTIPN-ITMNSPPVLQNKIPSDVDQNLAFVGYTYKRFDMM 501          
BLAST of CX673278 vs. ExPASy Swiss-Prot
Match: MRCKA_RAT (Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus GN=Cdc42bpa PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12
Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = -2
Query:  592 KLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRKMLSSKDINFVGYTYKNFEIVND 876
            +L+C+ E RLG  G ++ K HP+F GI+WD +   +A +IPEV+   DT NF+  ++     +T     P     S   + FVG+TY +  +++D
Sbjct:  320 RLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPP--PTHTAFSGHHLPFVGFTYTSSCVLSD 412          
BLAST of CX673278 vs. ExPASy Swiss-Prot
Match: MRCKA_MOUSE (Serine/threonine-protein kinase MRCK alpha OS=Mus musculus GN=Cdc42bpa PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12
Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = -2
Query:  592 KLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRKMLSSKDINFVGYTYKNFEIVND 876
            +L+C+ E RLG  G ++ K HP+F GI+WD +   +A +IPEV+   DT NF+  ++     +T     P     S   + FVG+TY +  +++D
Sbjct:  320 RLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPP--PTHTAFSGHHLPFVGFTYTSSCVLSD 412          
BLAST of CX673278 vs. ExPASy Swiss-Prot
Match: MRCKA_HUMAN (Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens GN=CDC42BPA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12
Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = -2
Query:  592 KLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRKMLSSKDINFVGYTYKNFEIVND 876
            +L+C+ E RLG  G ++ K HP+F GI+WD +   +A +IPEV+   DT NF+  ++     +T     P     S   + FVG+TY +  +++D
Sbjct:  320 RLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPP--PTHTAFSGHHLPFVGFTYTSSCVLSD 412          
BLAST of CX673278 vs. ExPASy Swiss-Prot
Match: MRCKG_MOUSE (Serine/threonine-protein kinase MRCK gamma OS=Mus musculus GN=Cdc42bpg PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = -2
Query:  616 KLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRKMLSSKDINFVGYTY 876
            +LLC  E+RLG  G D+ + HP+F+G++W++L    A +IPE+   +DT NF+  ++  N+ +T   S       S   + FVG+TY
Sbjct:  314 QLLCRQEERLGRGGLDDFRKHPFFEGVDWERLATSTAPYIPELRGPMDTSNFDVDDDTLNRPETLPPSS--HGAFSGHHLPFVGFTY 398          
BLAST of CX673278 vs. ExPASy Swiss-Prot
Match: COT1_NEUCR (Serine/threonine-protein kinase cot-1 OS=Neurospora crassa GN=cot-1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = -2
Query:  604 LLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNF--EKFEEADN-------QIQTSAKSGPWRKMLSSKDINFVGYTYKNFE 873
            L+CN E RLG  GA EIK+H +F+G+E+D L +I+A F P +   +DT  F  ++ ++ DN       Q    A +   ++      + F+GYT+K F+
Sbjct:  496 LICNTENRLGRGGAHEIKSHAFFRGVEFDSLRRIRAPFEPRLTSAIDTTYFPTDEIDQTDNATLLKAQQAARGAAAPAQQEESPELSLPFIGYTFKRFD 594          
BLAST of CX673278 vs. ExPASy Swiss-Prot
Match: CBK1_DEBHA (Serine/threonine-protein kinase CBK1 OS=Debaryomyces hansenii GN=CBK1 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = -2
Query:  604 KLLCNVEQRLGT-KGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRKMLS--------SKDINFVGYTYKNFE 876
            KLL N E RLG   GADE+K+HP+F+G++WD + ++ A FIP++    DT+ F   +E +N   + A S    +            +D+ F+GYTY  F+
Sbjct:  610 KLLTNAENRLGRYNGADELKSHPFFRGVDWDTIRKVDAPFIPKLRSITDTRFFPT-DELENVPDSPALSKAMEQRDQVLQNGGNVKEDLPFIGYTYSRFD 708          
The following BLAST results are available for this feature:
BLAST of CX673278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
NDRB_DICDI4.063e-1434.74Probable serine/threonine-protein kinase ndrB OS=D... [more]
CBK1_PNECA2.633e-1342.11Serine/threonine-protein kinase CBK1 OS=Pneumocyst... [more]
MRCKA_RAT8.471e-1234.74Serine/threonine-protein kinase MRCK alpha OS=Ratt... [more]
MRCKA_MOUSE8.471e-1234.74Serine/threonine-protein kinase MRCK alpha OS=Mus ... [more]
MRCKA_HUMAN8.471e-1234.74Serine/threonine-protein kinase MRCK alpha OS=Homo... [more]
MRCKG_MOUSE4.204e-1136.78Serine/threonine-protein kinase MRCK gamma OS=Mus ... [more]
COT1_NEUCR9.366e-1135.35Serine/threonine-protein kinase cot-1 OS=Neurospor... [more]
CBK1_DEBHA9.366e-1137.00Serine/threonine-protein kinase CBK1 OS=Debaryomyc... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_21F06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-21F06-K11-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX673278 ID=CX673278; Name=CX673278; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTAAAGAGAACGGCCTCTTTTCTTTCTTTACTCCATACCGAAA
TAAAGTGTACACCTATCATCAAACAAACAACATCAAGAATAATTACAATT
AAAACAATGCTACACAAATTTCACGCAGATTAGATGAAATGGCAAGGCCA
AAAGATACAGAAACAAATTTGGAAGAATATTTACTTAATAAATACTATTT
TACAAAGAACACCATTCTTGCTAGCTAATCCGAAAGCCAATTAGCATCTC
AAACCACTCGTTCTTTTGGGGGCCTTCACCCCTAAAACTTCCAATCTATA
AATACGAAATGCGGGGAGCGGTAGAACCAAAAGCTATTCGCCTGAGAACA
AAATCCTCTTTGTTGATTTTTAAAGCTTTTTCATCTGATGTTAGAATAAC
AGCGTAGCTCATTGGGAAGATTTACCCTCCTTCTCGGGAACTTCTATTTG
GGGAGGCAAAAGGTTCAGAAAGCTTCCCCCATGAACAGGTTGATTCACCA
TAGCCGACTCATCTTCAAAGAGAGATTTGATGGAGGGCCTCTTCGGTTTT
GTGCTTTTCTTCTTCAATTCAGCAATCCCAGGTAATTGATGATCGTTTAC
GATTTCGAAGTTCTTGTATGTATAACCCACAAAATTTATATCCTTGGAAG
AAAGCATCTTCCTCCATGGACCAGATTTTGCTGAAGTCTGAATTTGGTTG
TCAGCCTCTTCAAACTTCTCAAAGTTTTGAGTATCCAACTCATCATTGAC
TTCAGGAATAAATGCTGCTTTAATTTGATATAGTTTGTCCCACTCAATCC
CTTTAAACCATGGGTGAGCCTTAATTTCATCCGCGCCTTTTGTTCCGAGC
CGCTGTTCAACATTACATAAGAGTTTA
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