EY665139

Overview
NameEY665139
Unique NameEY665139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665139 vs. ExPASy Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.085e-22
Identity = 40/70 (57.14%), Postives = 54/70 (77.14%), Query Frame = 2
Query:  143 DAATCSPTELSPCAPAITSSAPPSGACCNKMMQQRPCLCGFLRDPNLKQYVNSPNAKRVIATCGIPYPRC 352
            +A TC+PTELS C PAIT  + PS  CC+K+  Q PCLC ++++P+LKQYVNSP AK+V++ CG+ YP C
Sbjct:   30 EAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99          
BLAST of EY665139 vs. ExPASy Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.252e-20
Identity = 38/67 (56.72%), Postives = 52/67 (77.61%), Query Frame = 2
Query:  152 TCSPTELSPCAPAITSSAPPSGACCNKMMQQRPCLCGFLRDPNLKQYVNSPNAKRVIATCGIPYPRC 352
            TCSP +LSPC   I S AP    CC K+ +QRPCLCG+L++P+L+QYVNSPNA+++ + CG+P P+C
Sbjct:    2 TCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASNCGVPVPQC 68          
BLAST of EY665139 vs. ExPASy Swiss-Prot
Match: NLTP2_HORVU (Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.988e-14
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 2
Query:  149 ATCSPTELSPCAPAITSSAPPSGACCNKMMQQRPCLCGFLRDPNLKQYVNSPNAKRVIATCGIPYPRC 352
            A C P +L+ CA AI     PSG CC  +  Q+ CLC +++DPN   YV+SP+A+  +  CGIP P C
Sbjct:   35 AACEPAQLAVCASAILGGTKPSGECCGNLRAQQGCLCQYVKDPNYGHYVSSPHARDTLNLCGIPVPHC 102          
BLAST of EY665139 vs. ExPASy Swiss-Prot
Match: NLTP2_MAIZE (Probable non-specific lipid-transfer protein 2 OS=Zea mays PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.693e-14
Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 2
Query:  146 AATCSPTELSPCA-PAITSSAPPSGACCNKMMQQRPCLCGFLRDPNLKQYVNSPNAKRVIATCGIPYPRC 352
            A  C+P +L+PCA PA+   A P  ACC ++  Q+ CLCG+ R PN   Y+ SPNA R+ A C +P PRC
Sbjct:    1 ANPCNPAQLTPCAGPALFGGAVPP-ACCAQLRAQQGCLCGYARSPNYGSYIRSPNAARLFAICNLPMPRC 69          
BLAST of EY665139 vs. ExPASy Swiss-Prot
Match: NLTPX_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-13
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 2
Query:  149 ATCSPTELSPCAPAITSSAPPSGACCNKMMQQRPCLCGFLRDPNLKQYVNSPNAKRVIATCGIPYPRC 352
            A+C+  +L+ CA AI   A P+ ACC+ +  Q+ C C F +DP   +YVNSPNA++ +++CGI  P C
Sbjct:   28 ASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95          
BLAST of EY665139 vs. ExPASy Swiss-Prot
Match: NLT2P_WHEAT (Non-specific lipid-transfer protein 2P OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.314e-13
Identity = 28/66 (42.42%), Postives = 41/66 (62.12%), Query Frame = 2
Query:  155 CSPTELSPCAPAITSSAPPSGACCNKMMQQRPCLCGFLRDPNLKQYVNSPNAKRVIATCGIPYPRC 352
            C  ++L+ CA AI S A PSG CC  +  Q+PC C + +DP   QY+ SP+A+  + +CG+  P C
Sbjct:    2 CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCGLAVPHC 67          
BLAST of EY665139 vs. ExPASy Swiss-Prot
Match: NLTPX_ORYSJ (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica GN=LTP-2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.359e-13
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 2
Query:  149 ATCSPTELSPCAPAITSSAPPSGACCNKMMQQRPCLCGFLRDPNLKQYVNSPNAKRVIATCGIPYPRC 352
            A C+  +L+ C  AI   A P+ ACC+ +  Q+ C C F +DP   +YVNSPNA++ +++CGI  P C
Sbjct:   28 AGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95          
BLAST of EY665139 vs. ExPASy Swiss-Prot
Match: NLT2G_WHEAT (Non-specific lipid-transfer protein 2G OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 2
Query:  155 CSPTELSPCAPAITSSAPPSGACCNKMMQQRPCLCGFLRDPNLKQYVNSPNAKRVIATCGIPYPRC 352
            C  ++L+ CA AI S A PSG CC  +  Q+ C C + +DP   QY+ SP+A+  + +CG+  P C
Sbjct:    2 CQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC 67          
The following BLAST results are available for this feature:
BLAST of EY665139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
NLTP_VIGUN5.085e-2257.14Probable non-specific lipid-transfer protein AKCS9... [more]
NLTP2_PRUAR1.252e-2056.72Non-specific lipid-transfer protein 2 OS=Prunus ar... [more]
NLTP2_HORVU2.988e-1445.59Probable non-specific lipid-transfer protein OS=Ho... [more]
NLTP2_MAIZE8.693e-1448.57Probable non-specific lipid-transfer protein 2 OS=... [more]
NLTPX_ORYSI1.135e-1344.12Non-specific lipid-transfer protein 2 OS=Oryza sat... [more]
NLT2P_WHEAT4.314e-1342.42Non-specific lipid-transfer protein 2P OS=Triticum... [more]
NLTPX_ORYSJ7.359e-1342.65Non-specific lipid-transfer protein 2 OS=Oryza sat... [more]
NLT2G_WHEAT3.652e-1240.91Non-specific lipid-transfer protein 2G OS=Triticum... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665139 ID=EY665139; Name=EY665139; organism=Citrus sinensis; type=EST; length=554bp
CCACGCGTCCGAGTAATTCTAGTATATTTTTGTTTTGTGACAATTAGTTT
TGATAATGAAGAAGGCTCCTTCTGTTGCGGCTGTGGGCTTTGTGGTGGCG
CTGCTGGTGGCTGTGGCGGCACTAAGCCAAGTTAATGTGGCAGATGCAGC
GACATGCAGCCCTACGGAGCTGAGCCCATGTGCGCCAGCAATCACATCGT
CGGCACCGCCGTCGGGAGCATGCTGCAACAAGATGATGCAGCAGAGGCCA
TGCCTTTGTGGATTCCTGAGGGACCCTAACCTGAAGCAATATGTTAACTC
TCCCAATGCTAAAAGGGTTATTGCTACCTGCGGAATTCCCTATCCTCGGT
GTTAGGGTTAATAATACGCCTTGTTTAATTAGTGCTTAAAAGGAGGGCGT
TACTAAATAAAATCTTGAGAGGTGCATGGTTTTGTTGGCATTAGTTTACT
AAGTGAAGCTATGAAAAAATATATGAATAGCAATATGTGCGAATATGATG
TTAATTAATAAAATTAAATAATAAGTTGTGGTTGTTGTAAAAAAAAAAAA
AAAA
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