EY665100

Overview
NameEY665100
Unique NameEY665100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665100 vs. ExPASy Swiss-Prot
Match: LCYE_SOLLC (Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.265e-24
Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 2 
Query:  326 DSTTLGLYVGLMAPDLPFTNNHGVWEDEPRDLGFEGCIEHVWQYTGVYIDEHEPILMARAYRRFT*PLLREELSLKCVQPSVAYLNSQ 589
            +S  LGL VGL+ PDLPFTNN+GVWEDE +DLG + CIEHVW+ T VY+D+ EPIL+ RAY R +   L EEL  +CV+  V YLNS+
Sbjct:  123 ESAKLGLNVGLVGPDLPFTNNYGVWEDEFKDLGLQACIEHVWRDTIVYLDDDEPILIGRAYGRVSRHFLHEELLKRCVEAGVLYLNSK 210
[Close]
BLAST of EY665100 vs. ExPASy Swiss-Prot
Match: LCYE_ARATH (Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.386e-23
Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 2 
Query:  326 DSTTLGLYVGLMAPDLPFTNNHGVWEDEPRDLGFEGCIEHVWQYTGVYIDEHEPILMARAYRRFT*PLLREELSLKCVQPSVAYLNSQ 589
            +S  LGL VGL+ PDLPFTNN+GVWEDE  DLG + CIEHVW+ T VY+D+ +PI + RAY R +  LL EEL  +CV+  V+YL+S+
Sbjct:  126 ESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRETIVYLDDDKPITIGRAYGRVSRRLLHEELLRRCVESGVSYLSSK 213
The following BLAST results are available for this feature:
BLAST of EY665100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LCYE_SOLLC1.265e-2460.23Lycopene epsilon cyclase, chloroplastic OS=Solanum... [more]
LCYE_ARATH2.386e-2357.95Lycopene epsilon cyclase, chloroplastic OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-A07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665100 ID=EY665100; Name=EY665100; organism=Citrus sinensis; type=EST; length=793bp
CCACGCGTCCGCCCAACATGGCGGACGCGAATGATATCACTGAAGTGAGA
ACCATACGAGTGCTGACTATTGTAATCATATTTCCTATAGAGTGACAGCT
ATAGCTACTAGTATTACTGCTGGTAGAGAGAGCTGCGTAGCCGACCAAGA
ATAAAATATATTAAAGCCGGCGGCTCTCATCTTGCTTTCGCACAAATGCG
GCCAAACAAGTCAATGGATAAACAGTCTAACTTAGCCGATAAGCTACCGT
CAATATCAATCTGGGATGGGATTCTGGATTTGGTGGTGATCTGGCTGAGG
GCCACCTGGTCTTGCTTTGGCTGCAGATTCAACCACTTTGGGGTTATATG
TTGGACTTATGGCCCCGGATCTCCCTTTCACAAACAATCATGGTGTGTGG
GAAGATGAACCAAGAGATCTTGGATTTGAAGGGTGTATCGAGCATGTCTG
GCAATACACTGGTGTCTATATTGATGAACATGAACCCATCTTGATGGCTC
GTGCTTATCGACGATTTACTTGACCCTTGCTTCGTGAAGAATTATCATTA
AAGTGTGTCCAGCCAAGTGTTGCATATCTTAACTCACAGTGGCATGCTTT
CCGTGTTCTACCTGTGGTCATCGTATTAGTACTTGTGAACATGATCTGAT
CCGCCGCTGCAAGCTCGCTACTGATGCTTCTAGGACTGCATCACGCTACT
GTTGTATGTGACGTGACCGGTCCTATAGTTGTGTCCATATCCTCATCGGT
NGTGGGGTGACGCTGACAATACTCCTAGATCGATCCTTATGTG
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