CV718892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV718892 vs. ExPASy Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1) HSP 1 Score: 418.698 bits (1075), Expect = 1.765e-116 Identity = 200/229 (87.34%), Postives = 218/229 (95.20%), Query Frame = -1 Query: 77 SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 763 S++EP++VLNNSK+SEFCAPLTSFDWN++EPKR+GTCSIDTTCTIWDIEK VVETQLIAHDKEV+DI WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT+PVAELERH+A VNAIAWAPQS +HICS GDD+QA IWE LP VAGPNGIDPMS+YSAGSEINQLQWS +QPDW+ IAF+NKMQLL+V Sbjct: 115 STVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWE--LPTVAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341
BLAST of CV718892 vs. ExPASy Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 3.032e-92 Identity = 160/229 (69.87%), Postives = 188/229 (82.10%), Query Frame = -1 Query: 77 SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 763 S +E + LN++K+SEFC PLTSFDWNE EP+RIGT S DTTCTIWDIE+ V+TQLIAHDKEV+DI WG VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KVV+LDIR P LPV EL+RH+A VNAIAWAP S HIC+ GDDSQA IW++ G+DP+ Y+AG+EI QLQWS +QPDW+AIAFS K+Q+L+V Sbjct: 118 SRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346
BLAST of CV718892 vs. ExPASy Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 9.752e-91 Identity = 156/230 (67.83%), Postives = 188/230 (81.74%), Query Frame = -1 Query: 77 DSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 766 +S +E + L++ K+SEF P+TSFDWNE EP+RIGT SIDTTCTIWDIE+ VV+TQLIAHDKEVYDI WG VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K+V+LDIR P LPV EL+RH+A VNAIAWAP S HICS GDDSQA IW++ G+DP+ Y+AG+E+ QLQWS +QPDW+AIAFSNK+Q+L+V Sbjct: 117 ESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346
BLAST of CV718892 vs. ExPASy Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.564e-72 Identity = 139/247 (56.28%), Postives = 171/247 (69.23%), Query Frame = -1 Query: 77 VGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV-----------ETQLIAHDKEVYDICWGEAR----VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 772 VG++ +LNN+K+S+FCAPLTSFDWNE++P +GT SIDTTCTIW +E G V +TQLIAHDKEVYDI + A +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WNKQD Y+AT+ MD +VVILD+R P PVA L HRACVN IAWAP S HIC+ DD QA IW++ P A DP+ Y+A EIN +QW+ QPDW+AI ++N +++L+V Sbjct: 100 VGETETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHH-PLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIE---DPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
BLAST of CV718892 vs. ExPASy Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.564e-72 Identity = 139/247 (56.28%), Postives = 171/247 (69.23%), Query Frame = -1 Query: 77 VGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV-----------ETQLIAHDKEVYDICWGEAR----VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 772 VG++ +LNN+K+S+FCAPLTSFDWNE++P +GT SIDTTCTIW +E G V +TQLIAHDKEVYDI + A +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WNKQD Y+AT+ MD +VVILD+R P PVA L HRACVN IAWAP S HIC+ DD QA IW++ P A DP+ Y+A EIN +QW+ QPDW+AI ++N +++L+V Sbjct: 100 VGETETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHH-PLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIE---DPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
BLAST of CV718892 vs. ExPASy Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2) HSP 1 Score: 266.159 bits (679), Expect = 1.464e-70 Identity = 133/216 (61.57%), Postives = 162/216 (75.00%), Query Frame = -1 Query: 77 SEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEAR-VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 721 SEFCAPL+SFDWNE +P + T SIDTTCTIW+IE G +TQLIAHDKEV+DI + +FASV ADGS+R+FDLR+ EHSTIIYE+P PLLRL WNKQD Y+ATI DS KV+ILDIR P++P AEL H++ VN I+WAP S HIC+V DD QA IW+L P DP+ Y+A +EINQL WS +QPDW+AIAFS+ +Q+LKV Sbjct: 114 SEFCAPLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRVPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE---DPLLTYNALAEINQLSWSSSQPDWIAIAFSSHLQILKV 325
BLAST of CV718892 vs. ExPASy Swiss-Prot
Match: YBE8_SCHPO (Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe GN=SPBC17D11.08 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.633e-39 Identity = 102/287 (35.54%), Postives = 137/287 (47.74%), Query Frame = -1 Query: 77 DSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDKEHSTIIYE---------------SPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLP----------------------------------------PVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 766 DS + A L+ + APLTSFDW + +P I S+DTTCT+WDI +TQLIAHDKEVYD+ + VF SV ADGSVR+FDLR +HSTIIYE SP PLLRL+ D+ MAT +S+ V ++DIR P A L H+ VNA+ W P S+ + + GDD +W+L P P+ N P+ + E+N L WS + D LA+ + +++LKV Sbjct: 148 DSPLLCQASLSTHVKTHNNAPLTSFDWCKTDPSYIVVSSLDTTCTVWDIVAQQSKTQLIAHDKEVYDVAFLKDSINVFVSVGADGSVRMFDLRSLDHSTIIYEGDSTFWKRNGDYTNASPPVSAPLLRLSACDSDVNLMATFHHNSSDVQMIDIRVPGTAYATLRGHKGDVNAVKWMPGSKSKLATCGDDCVVSLWDLDQPVNPSPAPTLSVSGTTPGMTGSTSEYVTPVSSVNSMRETASPLNADNQYSPLLSWKLEHEVNNLSWS-VKNDGLAVVYGKSLEILKV 433
BLAST of CV718892 vs. ExPASy Swiss-Prot
Match: YP247_YEAST (WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae GN=YPL247C PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.108e-37 Identity = 99/278 (35.61%), Postives = 131/278 (47.12%), Query Frame = -1 Query: 77 PLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG-VVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD---------TP-------LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL------------PLPPVAG-----PNGIDPMSMYSAGS--------------------------------EINQLQWSPAQPDWLAIAFSNKMQLLKV 706 P+TSFDWN ++ I + SIDTTC +WD++ V+TQLIAHD EV+D+ + ++FAS DGSVR+FDLR HSTIIYE P TP LLRL + D +AT DSNK++ILD+R+P P+ L+ H + VN I W P R + S GDD Q W+L P + G P+G M+ AGS EIN + W P + DW K Q ++V Sbjct: 245 PITSFDWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSEVFDVRFLTKSTQLFASCGGDGSVRVFDLRSLAHSTIIYEPPSSSVSGATAGTITPSSKGSDALLRLEPSPYDPNVLATFAADSNKIIILDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLSCGDDCQVLYWDLNSSFMEINAAGSKSPSIHGTSLEDPDGDTEMTDGGAGSGLNEDPLSLNNNSKQVCKTLETPNMMYANKTQEINNIAWRPQRGDWFGCVSGKKFQNVRV 522
BLAST of CV718892 vs. ExPASy Swiss-Prot
Match: HAT2_ASHGO (Histone acetyltransferase type B subunit 2 OS=Ashbya gossypii GN=HAT2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.430e-11 Identity = 58/209 (27.75%), Postives = 99/209 (47.37%), Query Frame = -1 Query: 62 SIDTTCTIWDIEKGVVETQLI-AHDKEVYDICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVA-----GPNGIDPMSMYSAG--SEINQLQWSPAQPDWLAIAF--SNKMQLLKV*SLLV 652 S DTT +WDIE ++ +HD V D+ W E + VF +VS D ++++ D R + + +P L+++K +A +DS ++ + D+R + P+ + H+ V + ++P + ICS G D +A IW+L +G + M AG S +N+ ++P P WL + N +Q KV LV Sbjct: 206 SDDTTVALWDIEAAKKPKSILTSHDDIVNDVKWHEFESNVFGTVSEDKTLQVHDKRVRLEPV---KKLPTASPFNTLSFSKHSRNLLAAAGVDS-QIYLYDMRDMSSPLHVMSGHQDSVTTVEFSPHTDGIICSSGSDRRAIIWDLTQIGAEQSQDDADDGAPELMMMHAGHRSPVNEFSFNPQIP-WLLASTEEDNVIQAWKVSMKLV 409
BLAST of CV718892 vs. ExPASy Swiss-Prot
Match: GRWD1_MOUSE (Glutamate-rich WD repeat-containing protein 1 OS=Mus musculus GN=Grwd1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11 Identity = 52/211 (24.64%), Postives = 95/211 (45.02%), Query Frame = -1 Query: 125 SFDWNEIEPKRIGTCSIDTTCTIWDIEKG----VVETQLIAHDKEVYDICWG--EARVFASVSADGSVRIFDLRDKE-HSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS--PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL--PPVAGPNGIDP---------MSMYSAGSEINQLQWSPAQP 697 + DW+ P R+ T +W +G V + + H + V D+ W E VFAS SAD S+RI+D+R + ++ + D + ++W++++ ++ D + + D+R PVA ++H A V ++ W PQ + G D+Q W+L + P G DP + ++ +++ +L W P P Sbjct: 219 ALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLLSG--GDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPEPGETETDPGLAALPQQLLFVHQGETDLKELHWHPQCP 427 The following BLAST results are available for this feature:
BLAST of CV718892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV718892 ID=CV718892; Name=CV718892; organism=Citrus sinensis; type=EST; length=775bpback to top |