CX070718

Overview
NameCX070718
Unique NameCX070718
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length341
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX070718 vs. ExPASy Swiss-Prot
Match: UMP6_ARATH (Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis thaliana GN=At1g47420 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.223e-14
Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = -2 
Query:  218 ELGSKMIFLKMRCAGLGSEWGKVTVLGTSGLAGSYVEQRA 337
            ELG+KMI LKMRC+GLGSEWGKVTVLGTSGL+GSYVEQRA
Sbjct:  218 ELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257
The following BLAST results are available for this feature:
BLAST of CX070718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UMP6_ARATH3.223e-1490.00Uncharacterized protein At1g47420, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_18E07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-18E07-I14-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070718 ID=CX070718; Name=CX070718; organism=Citrus sinensis; type=EST; length=341bp
TTTTTTTTTTTTTTTCCCAAACCAGATGAAAACACGATAAACCACAGATT
TATTAATTCTTAGTTACTGCTGACAAAAGAAGCTTTTATTCATCTGCCAT
GCAATTCCAACCGCGGTTTTGCTGGAGTGAGTATAACAAATTGTCTCCCA
CTACTCAGAAGCAAGTTCCAGATGTAAAGAAACCCATAATCACAATAAAC
CTTTCAGCTATGGGCTAAGCTCTCTGTTCAACATATGACCCCGCAAGTCC
TGAGGTTCCAAGAACAGTAACCTTTCCCCACTCAGAACCAAGGCCGGCAC
ATCTCATCTTTAGGAAAATCATTTTTGAACCCAACTCTGTT
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