CX070573

Overview
NameCX070573
Unique NameCX070573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070573 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 7.221e-41
Identity = 80/133 (60.15%), Postives = 100/133 (75.19%), Query Frame = -3
Query:  185 EKSRSQGTELLGKTIEERGLVEPWLEVEAPNSTPPIYELPLQLFFSSKFGRPVDEKLVKGRDEKLGKTLDVFEGGLSKSKYLAGDFFSLADLSPLPFPPYLVGPMGGPHMIRARKHVSPWWDDISTRPSWKKV 583
            EK RSQG +LLGKTIEERG VE WL+VEA +  PP+  L L + F+   G P DEK++K  +EKL + LDV+E  LSK++YLAGDF SLADL+ LPF  YLVGP+G  H+I+ RKHVS WWD IS+R +WK+V
Sbjct:   75 EKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEV 207          
BLAST of CX070573 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.111e-24
Identity = 55/135 (40.74%), Postives = 84/135 (62.22%), Query Frame = -3
Query:  176 KSRSQGTELLGKTIEERGLVEPWLEVEAPNSTPPIYELPLQLFFSSKFGRPVDEKLVKGRDEKLGKTLDVFEGGLSKSKYLAGDFFSLADLSPLPFPPYLVGPMGGPHMIRARKHVSPWWDDISTRPSWKKVLEL 580
            K   QGT+LLGKT+E R +V+ W+EVE          L + + F  K G+P D  LV+    K  K LDV+E  L+ ++YL GD F+LADLS +P   Y++       ++ +R++++ WW++IS RP+WKK++EL
Sbjct:   77 KYADQGTDLLGKTLEGRAIVDQWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CX070573 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.731e-18
Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = -3
Query:  179 QGTELLGKTIEERGLVEPWLEVEAPNSTPPIYELPLQLFFSSKFGRPVDEKLVKGRDEKLGKTLDVFEGGLSKSKYLAGDFFSLADLSPLPFPPYLVGPMGGPHMIRARKHVSPWWDDISTRPSWKKVLE 568
            +G +LL    ++  ++  W+EVE+    P   +L  ++      G   D+  V   +EKLGK LDV+E  L  SKYL GD F+LADL   P   YL+G      +  +R HVS W  DI  RP+W K +E
Sbjct:   81 KGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTK-VKSLFDSRPHVSAWCADILARPAWSKAIE 209          
BLAST of CX070573 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 1.731e-18
Identity = 53/127 (41.73%), Postives = 73/127 (57.48%), Query Frame = -3
Query:  164 IEERGLVEPWLEVEAPNSTPPIYELPLQ-LFFSSKFGRPVDEKLVKGRDEKLGKTLDVFEGGLSKSKYLAGDFFSLADLSPLPFPPYLVGPMGGPHMIRARKHVSPWWDDISTRPSWKKVLELCKTP 541
            ++E  +V+ WLEVE+   TP +  +  Q L     FG P DEK+V+   EKL K L+V+E  L+K KYLAGD+ S+ADLS +      +G      ++ A  HV  WW D+  RPS +KV  L K P
Sbjct:   89 LKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVA-GTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMKPP 214          
BLAST of CX070573 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.499e-17
Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = -3
Query:  179 RSQGTELLGK-TIEERGLVEPWLEVEAPNSTPPIYELPLQLFFSSKFGRPVDEKLVKGRDEKLGKTLDVFEGGLSKSKYLAGDFFSLADLSPLPFPPYLVGPMGGPHMIRARKHVSPWWDDISTRPSWKKVLE 574
            R    ELLG   +E+  +V+ WLEVEA   +PP   + ++  F+   GR  ++ +V    EKL K L+V+E  L+   YLAGDF SLADLSP      L+       ++ A  HVS WW  ++ RP+  KV +
Sbjct:   79 RKHKPELLGGGRLEQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAA-LVHALPHVSAWWQGLAARPAANKVAQ 210          
BLAST of CX070573 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 87.8113 bits (216), Expect = 4.263e-17
Identity = 52/139 (37.41%), Postives = 72/139 (51.80%), Query Frame = -3
Query:  164 KSRSQGTELLGKTIEERGLVEPWLEVEAPNSTPPIYELPLQLFFSSKFGRPVDEKLVKGRDEKLGKTLDVFEGGLSKSKYLAGDFFSLADLSPLPFPPYLVGPMGGPHMIRARKHVSPWWDDISTRPSWKKVLELCKTP 580
            K  S+GT+LL  T     L E WLEVE+ +  P    L  QL      G   D  +V+   E+L K LDV+E  L+++KYLAGD F+LAD +    P         P  + AR HV  WW+ I+ RP+++K +     P
Sbjct:   78 KYASEGTDLLPATASAAKL-EVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAIPLP 215          
BLAST of CX070573 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 5.567e-17
Identity = 54/136 (39.71%), Postives = 71/136 (52.21%), Query Frame = -3
Query:  170 RSQGTELLGKTIEERGLVEPWLEVEAPNSTPPIYELPLQLFFSSKFGRPVDEKLVKGRDEKLGKTLDVFEGGLSKSKYL-AGDFFSLADLSPLPFPPYLVGPMGGPHMIRARKHVSPWWDDISTRPSWKKVLELCK 574
            +++GT L+ K   E      W EVEA    P   +L  +L F   FG   D  +V+  + KL K LDV+E  L++S+YL A D F+L DL  LP   YL+G      +   R HVS W   I  RPSW+K L L K
Sbjct:   81 QNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQ-VKKLFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of CX070573 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 1.620e-16
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = -3
Query:  170 EKSRSQGTELLGKTIEE-RGLVEPWLEVEAPNSTPPIYELPLQLFFSSKFGRPVDEKLVKGRDEKLGKTLDVFEGGLSKSKYLAGDFFSLADLSPLPFPPYLVGPMGGPHMIRARKHVSPWWDDISTRPSWKKVLELCK 583
            E+   +G +L+ +  ++ +     WL+VE     P   +L  +  F   FG   D   V+  + KL K LDV+E  L+KS++LAGD F+LADL  LP   YL+G      +  +R  VS W   IS RP+W KV++L K
Sbjct:  125 EEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLG-TDSKVLFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of CX070573 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 85.8853 bits (211), Expect = 1.620e-16
Identity = 53/137 (38.69%), Postives = 73/137 (53.28%), Query Frame = -3
Query:  170 SRSQGTELLGK-TIEERGLVEPWLEVEAPNSTPPIYELPLQLFFSSKFGRPVDEKLVKGRDEKLGKTLDVFEGGLSKSKYLAGDFFSLADLSPLPFPPYLVGPMGGPHMIRARKHVSPWWDDISTRPSWKKVLELCK 577
            +R    ELL +  +EE  +V+ W+EVEA   T  +  +  Q+  S   G   D+K+V    EKL K L+V+E  L+K KYLAGDF SLADL+ +     L        ++ A  HV  WW  +  RPS +KV  L K
Sbjct:   76 ARKNKPELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYA-SVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CX070573 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.411e-14
Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = -3
Query:  185 KSRSQGTELLGK-TIEERGLVEPWLEVEAPNSTPPIYELPLQLFFSSKF-GRPVDEKLVKGRDEKLGKTLDVFEGGLSKSKYLAGDFFSLADLSPLPFPPYLVGPMGGPH--MIRARKHVSPWWDDISTRPSWKKV 580
            K +++  +LL +  + E  +V+ W EVE       I  +  +   +    G P ++K+V    EKL K L+V+E  LS+S YLAGDF S ADL+  P+  Y    MG P+  +  +  HV  WW+ +  RPS KK+
Sbjct:   78 KYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYF---MGTPYASLFDSYPHVKAWWERLMARPSVKKL 210          
The following BLAST results are available for this feature:
BLAST of CX070573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTF3_ARATH7.221e-4160.15Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH2.111e-2440.74Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF_HYOMU1.731e-1837.69Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF2_ORYSJ1.731e-1841.73Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF4_MAIZE2.499e-1738.35Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF3_MAIZE4.263e-1737.41Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF_SILCU5.567e-1739.71Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF6_ARATH1.620e-1636.69Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF1_MAIZE1.620e-1638.69Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF1_ORYSJ4.411e-1435.29Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_17F06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-17F06-K11-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070573 ID=CX070573; Name=CX070573; organism=Citrus sinensis; type=EST; length=588bp
TTTTTTTTTTTTTTTTTAAAAAAAAAAGCCCCAACTCCAAACATTTATTT
ATTTGAAACACACATATGCAAGAAACATATCCCACAGACAGAAACAAACC
AAGTAGTAAAGAAGTAAAACACAAGCCCGAAAATTGAAACACATACAATC
AAGCTCAGCCGAAAGGAGTCTTACAGAGCTCAAGGACTTTCTTCCAGGAC
GGCCGGGTGCTAATATCATCCCACCAGGGACTCACATGCTTCCGGGCTCT
AATCATATGGGGGCCCCCCATCGGCCCAACCAAGTAGGGGGGAAAGGGAA
GGGGACTCAAATCAGCCAGGCTGAAAAAATCACCAGCCAAATACTTGCTC
TTCGACAGCCCCCCCTCGAAAACGTCGAGGGTTTTTCCAAGCTTTTCGTC
CCTCCCCTTCACCAATTTTTCATCAACGGGACGTCCAAACTTGGAGGAAA
AAAAAAGTTGGAGGGGCAGCTCGTAAATTGGGGGGGTGGAGTTGGGGGCC
TCTACTTCTAGCCACGGTTCCACCAGGCCTCTTTCTTCAATTGTTTTACC
CAAAAGTTCGGTTCCTTGAGACCTGGACTTTTCCCCCG
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