CX043377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043377 vs. ExPASy Swiss-Prot
Match: RN217_XENLA (Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis GN=rnf217 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.837e-16 Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = -3 Query: 307 ECPFCHRLFCAQCYVPWHPGVNCEEYQRLNVDERGREDLMVRELAKE-----KKWSRCPHCKYYVERTEGCPHMTC-RCQFQFCYGCEAEWTQ 567 +CP C ++C +C+ PWH GVNC EY+ + D ++R A E + +CP CK +++RTEGC HMTC +C FCY C + Q Sbjct: 114 QCPSCQFIWCFRCHAPWHEGVNCREYK--------KGDKLLRHWANEIEHGQRNAQKCPRCKVHIQRTEGCDHMTCSQCNTNFCYRCGERYRQ 198
BLAST of CX043377 vs. ExPASy Swiss-Prot
Match: RN217_HUMAN (Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens GN=RNF217 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16 Identity = 46/131 (35.11%), Postives = 67/131 (51.15%), Query Frame = -3 Query: 307 IDASQRFYCPFKDCSAMLVYENNGETVI---SES----ECPFCHRLFCAQCYVPWHPGVNCEEYQRLNVDERGREDLMVRELAKE-----KKWSRCPHCKYYVERTEGCPHMTC-RCQFQFCYGCEAEWTQ 660 ID+S + P C ++ G SES +CP C ++C +C+ PWH GVNC+EY+ + D ++R A E + +CP CK +++RTEGC HMTC +C FCY C + Q Sbjct: 47 IDSSTK---PCPQCKHFTTFKKKGHIPTPSRSESKYKIQCPTCQFVWCFKCHSPWHEGVNCKEYK--------KGDKLLRHWASEIEHGQRNAQKCPKCKIHIQRTEGCDHMTCSQCNTNFCYRCGERYRQ 166
BLAST of CX043377 vs. ExPASy Swiss-Prot
Match: R144A_XENTR (Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis GN=rnf144a PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13 Identity = 36/108 (33.33%), Postives = 48/108 (44.44%), Query Frame = -3 Query: 325 RFYCPFKDCSAMLVYENNGETVISESECPFCHRLFCAQCYVPWHPGVNCEEYQRLNVDERGREDLMVRELAKEKKWSRCPHCKYYVERTEGCPHMTCR-CQFQFCYGC 645 R +CP C A+ + G +C C FC+ C WHPG C E + G + L + RCP CK Y+ER EGC M C+ C+ FC+ C Sbjct: 108 RTWCPSSSCQAVCKLQEKGIQNPQLVQCSACDIEFCSACKANWHPGQGCPENMAITF-LPGDSSSFFKSLEDDVPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYC 214
BLAST of CX043377 vs. ExPASy Swiss-Prot
Match: R144A_HUMAN (Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens GN=RNF144A PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13 Identity = 35/108 (32.41%), Postives = 48/108 (44.44%), Query Frame = -3 Query: 325 RFYCPFKDCSAMLVYENNGETVISESECPFCHRLFCAQCYVPWHPGVNCEEYQRLNVDERGREDLMVRELAKEKKWSRCPHCKYYVERTEGCPHMTCR-CQFQFCYGC 645 R +CP C A+ ++ G +C C FC+ C WHPG C E + G + + RCP CK Y+ER EGC M C+ C+ FC+ C Sbjct: 108 RTWCPASTCQAVCQLQDVGLQTPQPVQCKACRMEFCSTCKASWHPGQGCPETMPITF-LPGETSAAFKMEEDDAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYC 214
BLAST of CX043377 vs. ExPASy Swiss-Prot
Match: R1441_DANRE (Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio GN=rnf144aa PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 36/114 (31.58%), Postives = 52/114 (45.61%), Query Frame = -3 Query: 325 LIDASQRFYCPFKDCSAMLVYENNGETVISESECPFCHRLFCAQCYVPWHPGVNCEEYQRLNVDERGREDLMVRELAKEKKWSRCPHCKYYVERTEGCPHMTCR-CQFQFCYGC 663 L+D S R +CP C A+ + + + C C FC+ C WHP +C+E + G + + RCP CK Y+ER EGC M C+ C+ FC+ C Sbjct: 103 LLDPS-RTWCPSSTCQAVCQLKESDTVLPQLVRCSVCTLEFCSACKASWHPDQDCQENVPITSFLPGESSSFFKADDDDAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYC 215
BLAST of CX043377 vs. ExPASy Swiss-Prot
Match: R144B_HUMAN (E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 37/110 (33.64%), Postives = 55/110 (50.00%), Query Frame = -3 Query: 325 RFYCPFKDCSAM--LVYENNGETVISESECPFCHRLFCAQCYVPWHPGVNCEEYQRLNVDERGREDLMVRELAKEKKWSRCPHCKYYVERTEGCPHMTCR-CQFQFCYGC 645 R +CP DC + + + G+ V+ E CP CH FC+ C WH V+C + Q + + R + E +CP C+ Y+ER EGC M C+ C+ FC+ C Sbjct: 118 RTWCPVADCQTVCPVASSDPGQPVLVE--CPSCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHR---ALFGTDAEAPIKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYC 222
BLAST of CX043377 vs. ExPASy Swiss-Prot
Match: R1442_DANRE (Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio GN=rnf144ab PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 34/108 (31.48%), Postives = 47/108 (43.52%), Query Frame = -3 Query: 325 RFYCPFKDCSAMLVYENNGETVISESECPFCHRLFCAQCYVPWHPGVNCEEYQRLNVDERGREDLMVRELAKEKKWSRCPHCKYYVERTEGCPHMTCR-CQFQFCYGC 645 R +CP C A+ + +CP C FC+ C H G C+E + G ++ E RCP CK Y+ER EGC M C+ C+ FC+ C Sbjct: 108 RTWCPSSSCQAVCQLNEAEVQLPQPVQCPECSLRFCSACRADCHTGQACQEMLPITTFLPGENGSNLKSQEDEAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYC 215
BLAST of CX043377 vs. ExPASy Swiss-Prot
Match: R144A_MOUSE (Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus GN=Rnf144a PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 34/108 (31.48%), Postives = 48/108 (44.44%), Query Frame = -3 Query: 325 RFYCPFKDCSAMLVYENNGETVISESECPFCHRLFCAQCYVPWHPGVNCEEYQRLNVDERGREDLMVRELAKEKKWSRCPHCKYYVERTEGCPHMTCR-CQFQFCYGC 645 R +CP C A+ ++ G +C C FC+ C WHPG C E + G + + RCP C+ Y+ER EGC M C+ C+ FC+ C Sbjct: 108 RTWCPASTCQAVCQLQDIGLQTPQLVQCKACDMEFCSACKARWHPGQGCPETMPITF-LPGETSSAFKMEEGDAPIKRCPKCRVYIERDEGCAQMMCKNCKHAFCWYC 214
BLAST of CX043377 vs. ExPASy Swiss-Prot
Match: R144B_BOVIN (E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 40/111 (36.04%), Postives = 56/111 (50.45%), Query Frame = -3 Query: 325 RFYCPFKDCSAM--LVYENNGETVISESECPFCHRLFCAQCYVPWHPGVNCEEYQ-RLNVDERGREDLMVRELAKEKKWSRCPHCKYYVERTEGCPHMTCR-CQFQFCYGC 645 R +CP DC + + + G+ V+ E CP CH FC+ C WH V+C + Q + E G L E K +CP C+ Y+ER EGC M C+ C+ FC+ C Sbjct: 119 RTWCPVADCQTVCPVATSDPGQPVLVE--CPSCHLKFCSCCKDAWHAEVSCRDSQPGILPTEHG--TLFGTETDAPIK--QCPVCRVYIERNEGCAQMMCKNCKHTFCWYC 223 The following BLAST results are available for this feature:
BLAST of CX043377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043377 ID=CX043377; Name=CX043377; organism=Citrus sinensis; type=EST; length=722bpback to top |