CX043373

Overview
NameCX043373
Unique NameCX043373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9665 contig Csv1_Contig9665:23..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.736e-71
Identity = 132/140 (94.29%), Postives = 136/140 (97.14%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 666
            MDQYEKVEKIGEGTYGVVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK+LYLVFEYLDLDLKKHMDSCPDFA DPR+IK FLY ILRGIAYCHSHRVLHRDLKPQNLLIDR+TN
Sbjct:    1 MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSCPDFAKDPRMIKRFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRQTN 140          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2A_ANTMA (Cell division control protein 2 homolog A OS=Antirrhinum majus GN=CDC2A PE=2 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 8.617e-71
Identity = 130/140 (92.86%), Postives = 136/140 (97.14%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 666
            M+QYEKVEKIGEGTYGVVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK+LYLVFEYLDLDLKKHMDSCP+F+ DPRL+K FLY ILRGIAYCHSHRVLHRDLKPQNLLIDRRTN
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSCPEFSQDPRLVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 140          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDKA1_ARATH (Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.228e-68
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 666
            MDQYEKVEKIGEGTYGVVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIV+LQDVVHSEK+LYLVFEYLDLDLKKHMDS PDF+ D  +IKT+LY ILRGIAYCHSHRVLHRDLKPQNLLIDRRTN
Sbjct:    1 MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHSNIVKLQDVVHSEKRLYLVFEYLDLDLKKHMDSTPDFSKDLHMIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 140          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_VIGAC (Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 5.780e-67
Identity = 126/140 (90.00%), Postives = 131/140 (93.57%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 666
            M+QYEKVEKIGEGTYGVVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDVVHSEK+LYLVFEYLDLDLKKHMDS P+F  DPR +K FLY IL GIAYCHSHRVLHRDLKPQNLLIDRRTN
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTN 140          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_VIGUN (Cell division control protein 2 homolog OS=Vigna unguiculata GN=CDC2 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.196e-66
Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 666
            M+QYEKVEKIGEGTYGVVYKAR+ VT+ETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDVVHSEK+LYLVFEYLDLDLKKHMDS P+F  DPR +K FLY IL GIAYCHSHRVLHRDLKPQNLLIDRRTN
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRVTDETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTN 140          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.746e-66
Identity = 121/140 (86.43%), Postives = 132/140 (94.29%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 666
            M+QYEK EKIGEGTYGVVY+AR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEM HGNIVRL DV+HSEK++YLVFEYLDLDLKK MDSCP+FA +P LIK++LY ILRG+AYCHSHRVLHRDLKPQNLLIDRRTN
Sbjct:    1 MEQYEKEEKIGEGTYGVVYRARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLHDVIHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTN 140          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.859e-65
Identity = 121/140 (86.43%), Postives = 130/140 (92.86%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 666
            M+QYEKVEKIGEGTYGVVYKA +  TNETIALKKIRLEQEDEGVPSTAIREISLLKEM HGNIVRL DVVHSEK++YLVFEYLDLDLKK MDSCP+FA +P LIK++LY IL G+AYCHSHRVLHRDLKPQNLLIDRRTN
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILHGVAYCHSHRVLHRDLKPQNLLIDRRTN 140          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.981e-64
Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 666
            M+QYEKVEKIGEGTYGVVYKAR+  TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDVVHSEK+LYLVFEYLDLDLKK MDS P+FA D R IK FLY IL GIAYCHSHRVLHRDLKPQNLLIDR +N
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKFMDSSPEFAKDQRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSSN 140          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDKA2_ORYSJ (Cyclin-dependent kinase A-2 OS=Oryza sativa subsp. japonica GN=CDKA-2 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.020e-63
Identity = 122/140 (87.14%), Postives = 129/140 (92.14%), Query Frame = 1
Query:  247 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 666
            M+QYEKVEKIGEGTYGVVYK ++  TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDVVH EK +YLVFEYLDLDLKKHMDS PDF N  R++K+FLY ILRGIAYCHSHRVLHRDLKPQNLLIDRRTN
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKGKHRHTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHKEKCIYLVFEYLDLDLKKHMDSSPDFKNH-RIVKSFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 139          
BLAST of CX043373 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.273e-63
Identity = 120/136 (88.24%), Postives = 126/136 (92.65%), Query Frame = 1
Query:  259 EKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYXILRGIAYCHSHRVLHRDLKPQNLLIDRRTN 666
            E VEKIGEGTYGVVYKAR+ VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH NIVRLQDVVHS+K+LYLVFEYLDLDLKKHMDS P+F  DPR +K FLY +L GIAYCHSHRVLHRDLKPQNLLIDRRTN
Sbjct:    2 ENVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSDKRLYLVFEYLDLDLKKHMDSSPEFIKDPRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTN 137          
The following BLAST results are available for this feature:
BLAST of CX043373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_CHERU1.736e-7194.29Cell division control protein 2 homolog OS=Chenopo... [more]
CDC2A_ANTMA8.617e-7192.86Cell division control protein 2 homolog A OS=Antir... [more]
CDKA1_ARATH5.228e-6890.71Cyclin-dependent kinase A-1 OS=Arabidopsis thalian... [more]
CDC2_VIGAC5.780e-6790.00Cell division control protein 2 homolog OS=Vigna a... [more]
CDC2_VIGUN2.196e-6689.29Cell division control protein 2 homolog OS=Vigna u... [more]
CDKA1_ORYSJ3.746e-6686.43Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
CDC2_MAIZE1.859e-6586.43Cell division control protein 2 homolog OS=Zea may... [more]
CDC22_MEDSA5.981e-6487.86Cell division control protein 2 homolog 2 OS=Medic... [more]
CDKA2_ORYSJ1.020e-6387.14Cyclin-dependent kinase A-2 OS=Oryza sativa subsp.... [more]
CDC21_MEDSA2.273e-6388.24Cell division control protein 2 homolog 1 (Fragmen... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F05-L10-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043373 ID=CX043373; Name=CX043373; organism=Citrus sinensis; type=EST; length=668bp
CTCACTTCTTCCACCGCCGCCGCTGACTCCAATCACCTCATTCTTACTCC
GGCGATCTCCCCCGTCGGCTTGGATCGTCCTCGCGTCTGTTACTGTATTA
TGCATTTGTATTTTTCTCTTTCGTAAGCGGTTAATTTTCTCTTCATAACA
CACTGCCGCCACCTACGCCGTCGATTCGTGCCGTTCTTGTCGCCGTCCGT
CGGTAGCAAGGACGCCTCGTTCGTGTAGCTGTTACATTAAGACTGAATGG
ACCAGTATGAAAAGGTTGAGAAGATTGGTGAAGGAACCTATGGAGTAGTT
TACAAGGCCCGTAATTGTGTCACGAATGAGACAATAGCATTGAAGAAGAT
CCGCCTTGAGCAGGAAGATGAAGGTGTGCCTAGCACCGCAATTAGAGAAA
TTTCCCTCTTGAAAGAAATGCAGCATGGGAACATTGTTAGGTTGCAAGAT
GTAGTGCATAGCGAGAAGAAACTTTATCTGGTTTTCGAGTATTTGGACTT
GGATTTGAAGAAGCACATGGATTCTTGCCCAGATTTTGCTAATGATCCTC
GTCTGATAAAAACATTCCTTTATCANATTCTACGTGGCATTGCCTACTGC
CATTCTCACCGGGTTCTTCATCGAGATTTGAAACCACAAAATTTGCTAAT
AGATCGTCGTACGAATGC
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