CX043371

Overview
NameCX043371
Unique NameCX043371
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043371 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.973e-65
Identity = 123/150 (82.00%), Postives = 133/150 (88.67%), Query Frame = -3
Query:  295 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXAYSYIKAQMEEEKRQMKA 744
            +SFTYRS+YSKKAMTDMDSTNIYAYISIIALFVC+PPAIIVEGPQL+KHG +DAI+KVG+ KFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSI+AFGNKISTQ              YS IKA+MEEEKRQMK+
Sbjct:  254 VSFTYRSLYSKKAMTDMDSTNIYAYISIIALFVCLPPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIKAKMEEEKRQMKS 403          
BLAST of CX043371 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 9.563e-64
Identity = 122/151 (80.79%), Postives = 131/151 (86.75%), Query Frame = -3
Query:  292 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXAYSYIKAQMEEEKRQMKAA 744
            ISFTYRSI+SKKAMTDMDSTN+YAYISIIALFVC+PPAIIVEGPQL+KHG +DAI+KVGM KFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS IKA++EEEKRQ K A
Sbjct:  257 ISFTYRSIFSKKAMTDMDSTNVYAYISIIALFVCLPPAIIVEGPQLLKHGFNDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYSVIKAKIEEEKRQGKTA 407          
BLAST of CX043371 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.746e-63
Identity = 120/151 (79.47%), Postives = 131/151 (86.75%), Query Frame = -3
Query:  292 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXAYSYIKAQMEEEKRQMKAA 744
            ISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VCIPPA+I+EGP L+K G +DAI+KVG+VKF+SDLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS+IKAQ+EEEKRQ KAA
Sbjct:  252 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIKAQIEEEKRQAKAA 402          
BLAST of CX043371 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.746e-63
Identity = 118/151 (78.15%), Postives = 131/151 (86.75%), Query Frame = -3
Query:  292 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXAYSYIKAQMEEEKRQMKAA 744
            ISFTYRSIYSKKAMTDMDSTN+YAYISIIAL  CIPPA++ EGPQL+KHG +DAI+KVGM+KFISDLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS IKA++EEEKR+MK+A
Sbjct:  257 ISFTYRSIYSKKAMTDMDSTNLYAYISIIALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWVGMFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYSLIKARIEEEKRRMKSA 407          
BLAST of CX043371 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.355e-62
Identity = 116/151 (76.82%), Postives = 130/151 (86.09%), Query Frame = -3
Query:  292 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXAYSYIKAQMEEEKRQMKAA 744
            ISFTYRSIYSKKAMTDMDSTN+YAYISIIAL  C+PPAI +EGPQL++HG +DAI+KVG+ KF++DLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS+IKA+MEEEKRQ KAA
Sbjct:  264 ISFTYRSIYSKKAMTDMDSTNVYAYISIIALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSFIKAKMEEEKRQKKAA 414          
BLAST of CX043371 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.018e-62
Identity = 119/151 (78.81%), Postives = 129/151 (85.43%), Query Frame = -3
Query:  292 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXAYSYIKAQMEEEKRQMKAA 744
            ISFTYRSIYSKKAMTDMDSTN+YAYISII+L  CIPPAII+EGPQL+KHG SDAI+KVGM KFISDLFWVGMFYHLYNQLA NTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YS IKA++EEEKR +K+A
Sbjct:  258 ISFTYRSIYSKKAMTDMDSTNLYAYISIISLLFCIPPAIILEGPQLLKHGFSDAIAKVGMTKFISDLFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIKAKIEEEKRGLKSA 408          
BLAST of CX043371 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.911e-60
Identity = 114/150 (76.00%), Postives = 128/150 (85.33%), Query Frame = -3
Query:  295 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXAYSYIKAQMEEEKRQMKA 744
            ISFTYRSIYSKKAMTDMDSTN+YAYISIIAL VCIPPA+I EGP+L++HG SDAI+KVG+ KF+SDLF VG+FYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQ              YSYIKA++EEEKR+  A
Sbjct:  260 ISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIKAKIEEEKRKKSA 409          
BLAST of CX043371 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.954e-16
Identity = 46/114 (40.35%), Postives = 75/114 (65.79%), Query Frame = -3
Query:  409 ISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAF 744
            ++F +R+I+SKK M    +   N YA +S+++L +  P AI VEGPQ+   G   A++ VG  +F+  +    +FYHLYNQ++  +L++++PLT +VGN +KR+ VI  SI+ F
Sbjct:  249 LAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVGP-QFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIF 361          
BLAST of CX043371 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.697e-16
Identity = 46/121 (38.02%), Postives = 78/121 (64.46%), Query Frame = -3
Query:  397 ISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV---GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKI 744
            ++F +R+I+SKK M    +   N YA +S+++L +  P +I VE PQ+   G  +A+S+VG     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR+ VI  SI+ F   I
Sbjct:  249 LAFVFRNIFSKKGMKGKSVSGMNYYACLSMMSLVILTPFSIAVEVPQMWAAGWQNAVSQVGP----NFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPI 365          
The following BLAST results are available for this feature:
BLAST of CX043371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
TPT_SPIOL2.973e-6582.00Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB9.563e-6480.79Triose phosphate/phosphate translocator, chloropla... [more]
TPT_PEA4.746e-6379.47Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR4.746e-6378.15Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU2.355e-6276.82Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR4.018e-6278.81Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE4.911e-6076.00Triose phosphate/phosphate translocator, chloropla... [more]
GPT1_ARATH1.954e-1640.35Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
GPT2_ARATH9.697e-1638.02Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_10F04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F04-L8-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043371 ID=CX043371; Name=CX043371; organism=Citrus sinensis; type=EST; length=746bp
TTCACATATTTCATTAATTCTCACTTTCTGTAAAACTCTTCAGAGCTGCT
AATTGAATTATATATAAGCTTGTTTTGAGAGACGGAAGCAAGCGATACAT
TATTATCAGTCAACATGAGCTGATTGCAAATTAGCAAATTGTTTGTACTC
TGAATTAAAGAAAATTTATTGTCAAAAAATAACCTCACAGCCAAAGAAAT
ACACTCAATTTGTCATTTTGATCTTTGGGGGAAAAAGTAGCACGACTTTA
CATCGGGACCTTTCCTCATTCACATGCTTCTTTTCTTCTCATGCTGCTTT
CATTTGTCGTTTCTCTTCTTCCATTTGGGCCTTGATGTAAGAGTAGGCTG
CCACTCCAGCAATTGCAATGACTGTTCCAATACCAGTTTGGGTTGAGATC
TTGTTGCCAAAGGCCAGGATTGAGAACCCAATCACAAACACACGTTTCAG
TACATTGCCAACTGCATGAGTAAGAGGTGCAACCCTCTCCAAGGTGTTGG
TAGCCAACTGATTGTAGAGGTGGTAAAACATCCCCACCCAAAAAAGATCT
GAAATGAACTTGACCATGCCCACTTTGGAAATTGCATCACTTAAGCCATG
CTTAATCAGTTGAGGTCCCTCAACAATGATGGCTGGTGGAATACAGACAA
AGAGCGCAATGATGGAAATATAGGCATAAATATTAGTACTGTCCATATCA
GTCATGGCTTTCTTGGAGTAGATACTCCTGTAAGTAAACGATATGT
back to top