CX043525

Overview
NameCX043525
Unique NameCX043525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043525 vs. ExPASy Swiss-Prot
Match: LANC1_MOUSE (LanC-like protein 1 OS=Mus musculus GN=Lancl1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22
Identity = 63/146 (43.15%), Postives = 83/146 (56.85%), Query Frame = -2
Query:  249 NYPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGGTIYVERANAFSSFLYHNVQNLVTSGHTRGADHGYFLFQGLAGTACIWFDLLEPVNVRFPGYEL 683
            NYP    + RD LV W HGA GV   L +A +VF  +R   DA  +  +V+W+ GL+KK  GL  GAAGNAYAFL+LY LT    Y+ RA  F+ +     ++       R AD  + LF+G+AGT     DLL P   +FP +EL
Sbjct:  260 NYPPCLDDTRDLLVHWCHGAPGVIYMLIQAYKVFKEERYLCDAQ-QCADVIWQYGLLKKGYGLCHGAAGNAYAFLALYNLTQDLKYLYRACKFAEWCLDYGEH-----GCRTADTPFSLFEGMAGTIYFLADLLVPTKAKFPAFEL 399          
BLAST of CX043525 vs. ExPASy Swiss-Prot
Match: LANC2_MOUSE (LanC-like protein 2 OS=Mus musculus GN=Lancl2 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.923e-22
Identity = 61/147 (41.50%), Postives = 83/147 (56.46%), Query Frame = -2
Query:  249 NYPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGGTIYVERANAFSSFLYHNVQNLVTSGH-TRGADHGYFLFQGLAGTACIWFDLLEPVNVRFPGYEL 683
            NYP S  N  D+LV W HGA GV   L +A QVF  ++  ++A +E  +V+W+ GL++K  G+  G +GN Y+FLSLYRLT    Y+ RA  F+ +       L    H  R  D  Y LF+G+AG      D+L P   RFP +EL
Sbjct:  305 NYPSSLSNETDRLVHWCHGAPGVIHVLLQAYQVFKEEKYLKEA-MECSDVIWQRGLLRKGYGICHGTSGNGYSFLSLYRLTQDKKYLYRACKFAEWC------LDYGAHGCRIPDRPYSLFEGMAGAVHFLSDILVPETARFPAFEL 444          
BLAST of CX043525 vs. ExPASy Swiss-Prot
Match: LANC1_HUMAN (LanC-like protein 1 OS=Homo sapiens GN=LANCL1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22
Identity = 62/146 (42.47%), Postives = 83/146 (56.85%), Query Frame = -2
Query:  249 NYPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGGTIYVERANAFSSFLYHNVQNLVTSGHTRGADHGYFLFQGLAGTACIWFDLLEPVNVRFPGYEL 683
            NYP   G+ RD LV W HGA GV   L +A +VF  ++   DA  +  +V+W+ GL+KK  GL  G+AGNAYAFL+LY LT    Y+ RA  F+ +     ++       R  D  + LF+G+AGT     DLL P   RFP +EL
Sbjct:  260 NYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDA-YQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGEH-----GCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 399          
BLAST of CX043525 vs. ExPASy Swiss-Prot
Match: LANC1_DANRE (LanC-like protein 1 OS=Danio rerio GN=lancl1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 58/146 (39.73%), Postives = 87/146 (59.59%), Query Frame = -2
Query:  249 NYPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGGTIYVERANAFSSFLYHNVQNLVTSGHTRGADHGYFLFQGLAGTACIWFDLLEPVNVRFPGYEL 683
            NY    G+ RD LV W HG+ GV   L +A +VF   R++ + A++ GEV+W+ GL+KK  GL  GAAGNAY FL+LY++T    ++ RA  F+ +  +  ++       R  D  + LF+G+AGT     DLL+P   +FP +E+
Sbjct:  266 NYAPCVGDARDLLVHWCHGSPGVIYMLIQAFKVF-GVRQYLEDALQCGEVIWQRGLLKKGYGLCHGAAGNAYGFLALYKITQDPKHLYRACMFADWCMNYGRH-----GCRTPDTPFSLFEGMAGTIYFLADLLQPARAKFPCFEV 405          
BLAST of CX043525 vs. ExPASy Swiss-Prot
Match: LANC2_HUMAN (LanC-like protein 2 OS=Homo sapiens GN=LANCL2 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.940e-21
Identity = 61/147 (41.50%), Postives = 83/147 (56.46%), Query Frame = -2
Query:  249 NYPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGGTIYVERANAFSSFLYHNVQNLVTSGH-TRGADHGYFLFQGLAGTACIWFDLLEPVNVRFPGYEL 683
            NYP S  N  D+LV W HGA GV   L +A +VF  ++  ++A +E  +V+W+ GL++K  G+  G AGN Y+FLSLYRLT    Y+ RA  F+ +       L    H  R  D  Y LF+G+AG      D+L P   RFP +EL
Sbjct:  305 NYPSSLSNETDRLVHWCHGAPGVIHMLMQAYKVFKEEKYLKEA-MECSDVIWQRGLLRKGYGICHGTAGNGYSFLSLYRLTQDKKYLYRACKFAEWC------LDYGAHGCRIPDRPYSLFEGMAGAIHFLSDVLGPETSRFPAFEL 444          
BLAST of CX043525 vs. ExPASy Swiss-Prot
Match: LANC1_RAT (LanC-like protein 1 OS=Rattus norvegicus GN=Lancl1 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21
Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = -2
Query:  249 NYPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGGTIYVERANAFSSFLYHNVQNLVTSGHTRGADHGYFLFQGLAGTACIWFDLLEPVNVRFPGYEL 683
            NYP    + RD LV W HGA GV   L +A +VF  +    DA  +  +V+W+ GL+KK  GL  GAAGNAYAFL+LY LT    Y+ RA  F+ +     ++       R  D  + LF+G+AGT     DLL P   +FP +EL
Sbjct:  260 NYPSCLDDTRDLLVHWCHGAPGVIYMLIQAYKVFKEEHYLCDAQ-QCADVIWQYGLLKKGYGLCHGAAGNAYAFLALYNLTQDAKYLYRACKFAEWCLDYGEH-----GCRTPDTPFSLFEGMAGTIYFLADLLVPTKAKFPAFEL 399          
BLAST of CX043525 vs. ExPASy Swiss-Prot
Match: LANC3_MOUSE (LanC-like protein 3 OS=Mus musculus GN=Lancl3 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.544e-20
Identity = 57/145 (39.31%), Postives = 79/145 (54.48%), Query Frame = -2
Query:  261 NYPVSEGNP---RDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGGTIYVERANAFSSFLYHNVQNLVTSGHTRGADHGYFLFQGLAGTACIWFDLLEPVNVRFP 683
            N+P   G      ++LV W HGA G+A    KA  +     ++ D  I  GE+ W+ GL+KK  G+  G AG+AY FL LYRLTG + Y+ RA  F+ FL+        SG +R  +  Y L++G +GT C   DLL+P    FP
Sbjct:  275 NWPPELGETIERENELVHWCHGAPGIAYLFAKA-YLISKKPQYLDTCIRCGELTWQKGLLKKGPGICHGVAGSAYVFLLLYRLTGNSKYIYRAQRFAQFLF---TEEFKSG-SRVLESIYSLYEGFSGTVCFLIDLLQPNQAEFP 414          
BLAST of CX043525 vs. ExPASy Swiss-Prot
Match: LANC3_HUMAN (LanC-like protein 3 OS=Homo sapiens GN=LANCL3 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20
Identity = 56/145 (38.62%), Postives = 77/145 (53.10%), Query Frame = -2
Query:  261 NYPVSEGNP---RDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGGTIYVERANAFSSFLYHNVQNLVTSGHTRGADHGYFLFQGLAGTACIWFDLLEPVNVRFP 683
            N+P   G      ++LV W HGA G+A    KA  V     ++ D  I  GE+ W+ GL+KK  G+  G AG+AY FL LYRLTG + Y+ RA  F+ FL+           +R  +  Y L++G +GT C   DLL+P    FP
Sbjct:  275 NWPPELGETIERENELVHWCHGAPGIAYLFAKAYLVSKKP-QYLDTCIRCGELTWQKGLLKKGPGICHGVAGSAYVFLLLYRLTGNSKYIYRAQRFAQFLFTE----EFKAGSRVLESIYSLYEGFSGTVCFLIDLLQPNQAEFP 414          
BLAST of CX043525 vs. ExPASy Swiss-Prot
Match: LANC3_DROPS (LanC-like protein 3 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15215 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.669e-16
Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = -2
Query:  261 NYPVSEGNPRD----KLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGGTIYVERANAFSSFLYHNVQNLVTSGHTRGADHGYFLFQGLAGTACIWFDLLEPVNVRFP 683
            N+PV+  + R     +LV W HGA G    L KA  +F  + ++  +   + +++WK G ++K  G+  G AGN Y FL L+RLT    Y+ RA+ F   L     N       R  D+ + L++G+AGT C   D+LEP    FP
Sbjct:  274 NFPVALEDLRSGRDKRLVHWCHGAPGAVYMLAKAYLIF-KEEKYLTSLRRSADLVWKKGFLRKGPGICHGVAGNGYVFLLLFRLTNEMKYLYRAHKFMELL----TNSEFKQRARIPDNPHSLYEGVAGTVCFLVDILEPEQAYFP 414          
BLAST of CX043525 vs. ExPASy Swiss-Prot
Match: LANC3_DROME (LanC-like protein 3 homolog OS=Drosophila melanogaster GN=CG2061 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.669e-16
Identity = 52/146 (35.62%), Postives = 74/146 (50.68%), Query Frame = -2
Query:  261 NYPVSEGNPRD----KLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGGTIYVERANAFSSFLYHNVQNLVTSGHTRGADHGYFLFQGLAGTACIWFDLLEPVNVRFP 683
            N+PV+  + R     +LV W HGA G    L KA  +F  + ++  +     +++WK G ++K  G+  G AGN Y FL L+RLT    Y+ RA+ F   L     N       R  D  + L++G+AGT C   DLLEP    FP
Sbjct:  273 NFPVALEDLRSGRDKRLVHWCHGAPGAVYVLAKAYLIF-KEEKYLASLRRCADMVWKKGFLRKGPGICHGVAGNGYVFLLLFRLTNEMRYLYRAHKFMELL----TNAEFKLRARTPDRPHSLYEGVAGTVCYLVDLLEPEQAYFP 413          
The following BLAST results are available for this feature:
BLAST of CX043525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
LANC1_MOUSE4.535e-2243.15LanC-like protein 1 OS=Mus musculus GN=Lancl1 PE=1... [more]
LANC2_MOUSE5.923e-2241.50LanC-like protein 2 OS=Mus musculus GN=Lancl2 PE=1... [more]
LANC1_HUMAN7.736e-2242.47LanC-like protein 1 OS=Homo sapiens GN=LANCL1 PE=1... [more]
LANC1_DANRE2.251e-2139.73LanC-like protein 1 OS=Danio rerio GN=lancl1 PE=2 ... [more]
LANC2_HUMAN2.940e-2141.50LanC-like protein 2 OS=Homo sapiens GN=LANCL2 PE=1... [more]
LANC1_RAT5.014e-2141.78LanC-like protein 1 OS=Rattus norvegicus GN=Lancl1... [more]
LANC3_MOUSE5.544e-2039.31LanC-like protein 3 OS=Mus musculus GN=Lancl3 PE=2... [more]
LANC3_HUMAN7.241e-2038.62LanC-like protein 3 OS=Homo sapiens GN=LANCL3 PE=2... [more]
LANC3_DROPS1.669e-1634.93LanC-like protein 3 homolog OS=Drosophila pseudoob... [more]
LANC3_DROME1.669e-1635.62LanC-like protein 3 homolog OS=Drosophila melanoga... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_11F07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11F07-K13-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043525 ID=CX043525; Name=CX043525; organism=Citrus sinensis; type=EST; length=684bp
TTTTTTTTTTTTTTTTTGAGCCATGTATTTCTAATATTATATTAAACGCC
ACGTGGCACTAATTTCCAAGACTACAACATCCCTTTAAAATCCCATTTCA
GTTCCCCGGGGCCTGTCCTATATCTCACTAATTAAACAGTGAATGTTTCT
CTCATGCTTGCAATTGGAGCGATTCCAGTACATCTCAGGGTTACATTTTA
ATAATTAATACTAATAAAGTTGACAAAAGTTTGATTAATTTTAACCTAAA
GTTCATATCCTGGGAACCTAACGTTCACTGGCTCAAGCAAATCAAACCAA
ATGCAAGCTGTACCGGCAAGTCCTTGGAACAAAAAGTAACCATGATCAGC
ACCCCGAGTATGTCCTGAGGTCACTAAATTCTGAACATTATGATACAAGA
AGCTAGAAAATGCATTTGCCCTTTCCACATATATGGTCCCTCCCGTCAGA
CGATACAGGGAAAGGAAGGCATAGGCATTTCCTGCCGCTCCATCAGCCAG
TCCCACCTTCTTCACCAATCCATTCTTCCACAAAACTTCACCTGCTTCTA
TAGCGGCATCACGAAATTCTCTATCACTTGGAAAGACCTGCGATGCCTTG
CACAGCGTGATGGCCACACCAGTTGCGCCATGAGACCACTGCACCAACTT
GTCCCTCGGGTTTCCTTCACTAACGGGATAATTG
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