CX672687

Overview
NameCX672687
Unique NameCX672687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672687 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.213e-53
Identity = 88/140 (62.86%), Postives = 106/140 (75.71%), Query Frame = -3
Query:  374 IVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 793
            IV+NSWG SWGE+GY+RMERN+  + +GKCGIA+E SY                     P VCDNYY+CP+S TCCC++EYG  C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP
Sbjct:  306 IVRNSWGKSWGESGYVRMERNIKAS-SGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444          
BLAST of CX672687 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.439e-53
Identity = 86/147 (58.50%), Postives = 109/147 (74.15%), Query Frame = -3
Query:  353 IVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 793
            IV+NSWG SWGE+GY+RM RN+A + +GKCGIA+E SY                     P  CD+YY+CPESNTCCC+FEYG  CFAWGCCPLEAATCCDD+YSCCPH+YP+C++  GTCL+SK++P  V+AL+R PA P+W+ G +
Sbjct:  314 IVRNSWGKSWGESGYLRMARNIASS-SGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459          
BLAST of CX672687 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.464e-44
Identity = 78/148 (52.70%), Postives = 98/148 (66.22%), Query Frame = -3
Query:  350 IVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 793
            IV+NSWG++  E GY+R++RNV+ + +G CG+A+E SY                     P  CD Y  C    TCCC+ ++  SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R  A+P  A GN G
Sbjct:  195 IVRNSWGANCRENGYLRVQRNVSSS-SGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341          
BLAST of CX672687 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 79/145 (54.48%), Postives = 93/145 (64.14%), Query Frame = -3
Query:  377 IVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPA------VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 793
            IV+NSWG  WGE+GY+RMERN+  T TGKCGIAM ASY                     P       VCD+ +SCP  +TCCC F + N C  WGCCP+E ATCC DH SCCP DYP+CN RAGTC  SK++PL V+AL+RT AK
Sbjct:  319 IVRNSWGPKWGESGYVRMERNINVT-TGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462          
BLAST of CX672687 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 7.908e-35
Identity = 68/143 (47.55%), Postives = 79/143 (55.24%), Query Frame = -3
Query:  374 VKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 790
            V+NSWG  WGE GYIRMERNV    TGKCGIAM ASY                        CD Y  CP   TCCC +   N C  WGCCP+E ATCC DH +CCP +YP+CN +A TC  SK++P  +R      R  P +P
Sbjct:  337 VRNSWGPDWGENGYIRMERNVTAR-TGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQ--CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476          
The following BLAST results are available for this feature:
BLAST of CX672687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ORYA_ORYSJ2.213e-5362.86Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
RD21A_ARATH6.439e-5358.50Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSPL_SOLLC5.464e-4452.70Low-temperature-induced cysteine proteinase (Fragm... [more]
ORYB_ORYSJ8.723e-4254.48Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP1_ORYSJ7.908e-3547.55Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_18F01_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-18F01-K2-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672687 ID=CX672687; Name=CX672687; organism=Citrus sinensis; type=EST; length=795bp
TTTTTTTTTTTTTTTTTCAAGAAGAATCGTTAAATATCAATTCATAAAAG
CCTCCGCTGAATGACGCCAGGGATTTGGTAGAGGACATTGGAAATAGATA
ACAACAATTTGTTTGTGCATTGTTCAGATTCAACGCAGATAGATAACTTA
CAACGCTATATACCAAACCAACGTCCGAATAAATATTTAACAGACCATCC
ACCTGCCGGTACATTAACGTTTGGAATGAAATGCAGTAGAATGAACTAAG
GCCGGGGAGAAACTCATTCACAAGCACGAATATTTTCATCCTCCCTTCGG
CCTTCCACTGCTCTTACAGTGCCAACTATAATTAAGCACTGCTACTTCCA
CCTTGATTTCCATGAGCCCAGTAAGGTTTAGCAGGGGTGCGTCGTAATGC
CCTCACTCCCAATGGGTTGTCCTTGCTCATCAAGCAGGTCCCAGCACGAA
CATTACAGATGGGATAGTCATGTGGGCAGCAGCTATAGTGGTCATCACAG
CAGGTGGCAGCCTCAAGCGGGCAGCATCCCCATGCAAAGCAAGAGTTACC
ATACTCAAAGACACAGCAGCAAGTGTTGCTCTCAGGGCAAGAGTAATAAT
TGTCACACACAGCAGGAGGCTTTGTTGGAGATGGAGGGGACGGTCCAGGG
TTGGGAGGATTTTGGCCTTTCTTTATGGGATATGAGGCCTCCATGGCAAT
TCCACACTTGCCCGTGAGAGTGCCAGCCACGTTACGCTCCATCCTAATAT
AGCCAGCCTCTCCCCAGCTACTGCCCCATGAATTCTTCACAATCC
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