CX672677

Overview
NameCX672677
Unique NameCX672677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX672677 vs. ExPASy Swiss-Prot
Match: MIP1_ARATH (MND1-interacting protein 1 OS=Arabidopsis thaliana GN=MIP1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24
Identity = 66/189 (34.92%), Postives = 107/189 (56.61%), Query Frame = -1 
Query:  338 QLEARWRQEEKAKEELVMQASSIRKEREQIEASAKSKEDMIKSKAETNLMRYKDDIHRLEKEISQLRLKTDSSKIAALRRGIDGSYAGRLTDIKSSSVHKESQTPLISEVMKDYHDFSGT--GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNE---LHEKQGMK-DCPSCRSPIQRRIPVRYARS 886
            ++EA+WRQE+KAKEE + Q    ++ +E  E   K K + ++ K E +  R+KDD  RLE+E+ +L+  +DS          D S+        ++   K+SQ   I++++++     G+       +REC++C+ +E+SVVFLPCAHQVVC +C++        G K  CP CR  +Q+RI +  A S
Sbjct:  538 EIEAKWRQEQKAKEEALAQMEEEQRSKEAAEGHNKRKLETLRLKIELDFQRHKDDHQRLEQELGRLKASSDS----------DSSHIS-----NNAWKPKKSQGENIAKLLEEIDKLEGSYDNEANYDRECIICMKDEVSVVFLPCAHQVVCGSCSDSFFASNNGGSKVTCPCCRGLVQQRIRIFGATS 711
The following BLAST results are available for this feature:
BLAST of CX672677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MIP1_ARATH1.159e-2434.92MND1-interacting protein 1 OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_18E07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-18E07-I14-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672677 ID=CX672677; Name=CX672677; organism=Citrus sinensis; type=EST; length=886bp
TTTTTTTTTTTTTTTTTGTATAAAAAATACTACTTTTATTCAAGGGTGAT
GGAACTTTCAATACATGCATAGCATTCCACCAAAGCTGATCTTGCAGTCC
AGAAACAGAGACAACAAAATGGTGAGATGCCTCATAAATAAACAGAGAGT
TCAAGCTTATATACTGCCAAAGCCCATTAAAAGATGGGAAGAGTACACCG
ACGCACCAACCTTGCAATGCAAGAAAGCTCAATTGTCTGAACTCTTTAGA
GGGTATCTTAAATGGCATTATTCAATTCAAAGGAGTCTGACAACCATTAT
TATTCAAAACACTCAACTCAACAGAGAACTTGAACTAAGAGCGAGCATAA
CGTACAGGAATACGCCGCTGGATGGGACTCCTACACGAAGGGCAATCCTT
CATCCCCTGTTTCTCGTGCAGCTCATTGCATGTCGTGCAAACAACTTGAT
GGGCACAGGGGAGAAAGACTACAGACATCTCCTCTGATAGGCACATCACA
CACTCACGTTCACGTTTCACACCACCTGTCCCAGAGAAGTCATGATAATC
TTTCATTACTTCAGAGATTAGAGGGGTCTGGGATTCCTTGTGCACTGAAC
TACTTTTTATGTCTGTAAGTCTGCCTGCATAGCTTCCATCAATGCCCCTC
CGAAGAGCAGCAATTTTTGAAGAGTCAGTCTTCAGTCTCAACTGGGAGAT
TTCTTTCTCAAGCCTGTGGATATCATCTTTGTACCTCATTAAATTCGTTT
CTGCTTTTGATTTGATCATATCCTCCTTAGATTTTGCTGAAGCCTCAATC
TGTTCTCTTTCTTTTCTTATCGAGCTGGCCTGCATAACTAGCTCTTCCTT
TGCCTTCTCTTCCTGTCGCCATCTAGCCTCAAGTTG
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