CX672550

Overview
NameCX672550
Unique NameCX672550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672550 vs. ExPASy Swiss-Prot
Match: MGDG2_ARATH (Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=MGD2 PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.069e-70
Identity = 127/155 (81.94%), Postives = 142/155 (91.61%), Query Frame = -3
Query:  273 PIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTA 737
            PIGQ+++ICGRN+ LAS L++ +WKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAE+LIR LPIILNDYIPGQEKGNVPYVV+NGAGVFTRSPKETARIV EWFSTKTDEL++ S+NA KLAQPEAV DIVKDI +L+ QRGPLA V Y LT+
Sbjct:  308 PIGQMVVICGRNKKLASALEAIDWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAESLIRSLPIILNDYIPGQEKGNVPYVVENGAGVFTRSPKETARIVGEWFSTKTDELEQTSDNARKLAQPEAVFDIVKDIDELSEQRGPLASVSYNLTS 462          
BLAST of CX672550 vs. ExPASy Swiss-Prot
Match: MGDG3_ARATH (Monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Arabidopsis thaliana GN=MGD3 PE=1 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 1.092e-67
Identity = 123/144 (85.42%), Postives = 133/144 (92.36%), Query Frame = -3
Query:  309 SPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 740
            +PIGQLI+ICGRN+ LASTL S EWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALI GLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETA+IV +WFS   +ELK+MSENALKL+QPEAV DIVKDIH L+ Q+
Sbjct:  311 NPIGQLIVICGRNKVLASTLASHEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALICGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETAKIVADWFSNNKEELKKMSENALKLSQPEAVFDIVKDIHHLSQQQ 454          
BLAST of CX672550 vs. ExPASy Swiss-Prot
Match: MGDG3_ORYSJ (Probable monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD3 PE=3 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.207e-66
Identity = 118/157 (75.16%), Postives = 141/157 (89.81%), Query Frame = -3
Query:  273 GSPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTA 743
            G PIGQLI+ICGRN+TL+S+LQ+ EWKIP+KVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILND+IPGQE GNVPYVVDNGAGVF++S +ETA++V  WF   +DELKRMSE ALKLAQPEAV DIV+DIH+L+ ++G ++++   LT+
Sbjct:  337 GKPIGQLIVICGRNKTLSSSLQALEWKIPIKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGVISQISSSLTS 493          
BLAST of CX672550 vs. ExPASy Swiss-Prot
Match: MGDG2_ORYSJ (Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD2 PE=2 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.287e-64
Identity = 114/155 (73.55%), Postives = 131/155 (84.52%), Query Frame = -3
Query:  273 PIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTA 737
            P+GQ+++ICGRN+ L STLQS  W +PVK+RGFE QMEKWMGACDCIITKAGPGTIAEALIRGLPIILND+IPGQE GNVPYVVDNGAGVF++ P+E AR V  WF+T T+EL+R S NALKLAQPEAV DIVKDIH L  Q   + R+PY LT+
Sbjct:  309 PVGQIVVICGRNQVLRSTLQSSRWNVPVKIRGFEKQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKDPREAARQVARWFTTHTNELRRYSLNALKLAQPEAVFDIVKDIHKLQQQPATVTRIPYSLTS 463          
BLAST of CX672550 vs. ExPASy Swiss-Prot
Match: MGDG2_ORYSI (Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. indica GN=MGD2 PE=3 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.287e-64
Identity = 114/155 (73.55%), Postives = 131/155 (84.52%), Query Frame = -3
Query:  273 PIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARVPYMLTA 737
            P+GQ+++ICGRN+ L STLQS  W +PVK+RGFE QMEKWMGACDCIITKAGPGTIAEALIRGLPIILND+IPGQE GNVPYVVDNGAGVF++ P+E AR V  WF+T T+EL+R S NALKLAQPEAV DIVKDIH L  Q   + R+PY LT+
Sbjct:  309 PVGQIVVICGRNQVLRSTLQSSRWNVPVKIRGFEKQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNGAGVFSKDPREAARQVARWFTTHTNELRRYSLNALKLAQPEAVFDIVKDIHKLQQQPATVTRIPYSLTS 463          
BLAST of CX672550 vs. ExPASy Swiss-Prot
Match: MGDG1_ORYSJ (Probable monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD1 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.027e-54
Identity = 97/145 (66.90%), Postives = 121/145 (83.45%), Query Frame = -3
Query:  309 GSPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 743
            G P GQ+++ICGRN+ L S LQS  WK+PV+V+GF T+ME+ MGACDCIITKAGPGTIAEA+IRGLPIILN YI GQE GNVPYVVDNG G F++SP++ A+IV +WF  ++DELK MS+NALKLA+P+AV  IV D+H+L  Q+
Sbjct:  381 GEPTGQILVICGRNKKLTSRLQSINWKVPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVDNGCGKFSKSPEQIAKIVADWFGPRSDELKMMSQNALKLARPDAVFKIVHDLHELVRQK 525          
BLAST of CX672550 vs. ExPASy Swiss-Prot
Match: MGDG_SOYBN (Probable monogalactosyldiacylglycerol synthase, chloroplastic OS=Glycine max GN=MGD A PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.260e-54
Identity = 98/148 (66.22%), Postives = 123/148 (83.11%), Query Frame = -3
Query:  300 GSPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPL 743
            G+P+GQ+++ICGRN+ LA+ L S  WK+PV+V+GF T+ME+ MGACDCIITKAGPGTIAEA IRGLPIILNDYI GQE GNVPYVV+NG G F++SPK+ A+IV EWF  K  EL++MS+NAL+LA+P+AV  IV D+H+L  QR  L
Sbjct:  376 GAPVGQILVICGRNKKLANKLSSINWKVPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAQIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKDIAKIVAEWFGPKAYELQQMSQNALRLARPDAVFKIVHDLHELVRQRSYL 523          
BLAST of CX672550 vs. ExPASy Swiss-Prot
Match: MGDG_CUCSA (Monogalactosyldiacylglycerol synthase, chloroplastic OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.972e-54
Identity = 98/145 (67.59%), Postives = 120/145 (82.76%), Query Frame = -3
Query:  309 GSPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 743
            G PIGQ+++ICG N+ LA  L+S +WK+PV+V+GF T+ME+ MGACDCIITKAGPGTIAEA+IRGLPIILNDYI GQE GNVPYVV+NG G F++SPKE A IV +WF  K DEL  MS+NAL+LA+P+AV  IV D+H+L  QR
Sbjct:  373 GEPIGQVLVICGHNKKLAGRLRSIDWKVPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKEIANIVAKWFGPKADELLIMSQNALRLARPDAVFKIVHDLHELVKQR 517          
BLAST of CX672550 vs. ExPASy Swiss-Prot
Match: MGDG_TOBAC (Probable monogalactosyldiacylglycerol synthase, chloroplastic OS=Nicotiana tabacum GN=MGD A PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.453e-53
Identity = 96/145 (66.21%), Postives = 121/145 (83.45%), Query Frame = -3
Query:  309 GSPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQR 743
            G PIGQ+++ICGRN+ L + L S +WKIPV+V+GF T+ME+ MGACDCIITKAGPGTIAEA+IRGLPIILNDYI GQE GNVPYV++NG G F++SPK+ A IV +WF  + DEL+ MS+NAL+LA+P+AV  IV D+H+L  QR
Sbjct:  382 GEPIGQVLVICGRNKKLFNRLTSVQWKIPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAVIRGLPIILNDYIAGQEAGNVPYVIENGCGKFSKSPKKIANIVAQWFGPRQDELRIMSQNALRLARPDAVFKIVHDMHELVRQR 526          
BLAST of CX672550 vs. ExPASy Swiss-Prot
Match: MGDG1_ARATH (Monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=MGD1 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.191e-51
Identity = 95/151 (62.91%), Postives = 122/151 (80.79%), Query Frame = -3
Query:  291 GSPIGQLIIICGRNRTLASTLQSEEWKIPVKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDYIPGQEKGNVPYVVDNGAGVFTRSPKETARIVTEWFSTKTDELKRMSENALKLAQPEAVVDIVKDIHDLAAQRGPLARV 743
            G  +GQ++IICGRN+ L S L S +WKIPV+V+GF T+ME+ MGACDCIITKAGPGTIAEA+IRGLPIILN YI GQE GNVPYVV+NG G F++SPKE ++IV +WF   + EL+ MS+NAL+LA+PEAV  IV D+H+L  ++  L ++
Sbjct:  379 GEAVGQVLIICGRNKKLQSKLSSLDWKIPVQVKGFITKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFSKSPKEISKIVADWFGPASKELEIMSQNALRLAKPEAVFKIVHDMHELVRKKNSLPQL 529          
The following BLAST results are available for this feature:
BLAST of CX672550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
MGDG2_ARATH3.069e-7081.94Monogalactosyldiacylglycerol synthase 2, chloropla... [more]
MGDG3_ARATH1.092e-6785.42Monogalactosyldiacylglycerol synthase 3, chloropla... [more]
MGDG3_ORYSJ1.207e-6675.16Probable monogalactosyldiacylglycerol synthase 3, ... [more]
MGDG2_ORYSJ3.287e-6473.55Probable monogalactosyldiacylglycerol synthase 2, ... [more]
MGDG2_ORYSI3.287e-6473.55Probable monogalactosyldiacylglycerol synthase 2, ... [more]
MGDG1_ORYSJ4.027e-5466.90Probable monogalactosyldiacylglycerol synthase 1, ... [more]
MGDG_SOYBN5.260e-5466.22Probable monogalactosyldiacylglycerol synthase, ch... [more]
MGDG_CUCSA8.972e-5467.59Monogalactosyldiacylglycerol synthase, chloroplast... [more]
MGDG_TOBAC4.453e-5366.21Probable monogalactosyldiacylglycerol synthase, ch... [more]
MGDG1_ARATH3.191e-5162.91Monogalactosyldiacylglycerol synthase 1, chloropla... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17F07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17F07-K13-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672550 ID=CX672550; Name=CX672550; organism=Citrus sinensis; type=EST; length=748bp
TTTTTTTTTTCCTATGGAACACTTGTATTAATTACTGCAACACCACAACC
TTTGGCAACAGACCTTAACTTCTCTAACATAGAGCCCTATAAAAACCAAA
TCCTAATTCAACGTCAGAGCCTGTTATTGCAGAACTTTTATGGGGAACAG
GACTTTGTAGCCAAAGAATGATGTTATAGACAAACTAGCTGTACATGGCA
TTCCAATGCGGCATACAACAGACCTATTTCTTAGATGATGCTGAAAACAA
ATTAGATTATGCTCGTGAATGACGCTGTTAACATATAAGGAACTCTGGCT
AGAGGACCTCGCTGCGCGGCAAGGTCGTGAATGTCCTTCACGATGTCGAC
CACTGCCTCCGGTTGGGCTAGTTTAAGTGCATTCTCGGACATTCTCTTGA
GTTCATCAGTCTTCGTGCTGAACCATTCTGTTACAATCCTTGCAGTTTCT
TTAGGACTTCGAGTGAACACACCAGCGCCATTGTCAACTACATACGGTAC
ATTGCCCTTTTCTTGTCCAGGAATGTAGTCATTGAGGATAATAGGAAGTC
CTCTGATCAATGCTTCCGCAATTGTACCAGGTCCAGCTTTTGTTATAATG
CAGTCACAAGCTCCCATCCACTTCTCCATTTGTGTCTCAAACCCTCTAAC
CTTAACTGGGATCTTCCATTCCTCGGATTGCAGGGTAGAGGCAAGAGTTC
TGTTACGACCACAAATGATTATCAGTTGTCCAATTGGGCTCCCAGTTT
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