CX672549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672549 vs. ExPASy Swiss-Prot
Match: TAF5_SCHPO (Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe GN=taf5 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 60/203 (29.56%), Postives = 110/203 (54.19%), Query Frame = 2 Query: 77 VATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQS---TKMLGIINERINFQVSPGQPSSISDDAEIV 676 V YL KKG+S E L+ E + S I E+ P Y Y+ LR W SSL+LYK EL +L+P+F+H +++L+++ H + A+ F+ F++DH +H D++ L+ + PSH+ E A R +K + + +++LLL +L + S + ++ +IN+ I+ + PG+P ++ ++A+++ Sbjct: 16 VLDYLAKKGYSRTEAMLRLEASGSGVSVEEKLKSI----------------EETPDAYTHTYTILRDWVDSSLELYKAELHRILFPIFVHSYLNLLSQDHYEAAKQFYELFKDDHTDLHDFDVKNLKSLSLPSHVAEDRTAQQYRQNKYQLHFSRITFDLLLHFLFENVSNGGSIIIKLINQHIDIHIVPGRP-TVLENAKVI 201
BLAST of CX672549 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 1.244e-21 Identity = 57/194 (29.38%), Postives = 106/194 (54.64%), Query Frame = 2 Query: 173 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAANQINQKEVHWGLLED 751 + + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +++LV H EA++FF F D E + DL+ L + H++ E R SK ++I + SY+LL ++L + Q+ ++ I+ E + + G P S DA + +L G +A + N+ +V +GLL++ Sbjct: 190 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG---EAKREANKSKVFFGLLKE 379
BLAST of CX672549 vs. ExPASy Swiss-Prot
Match: TAF5_MOUSE (Transcription initiation factor TFIID subunit 5 OS=Mus musculus GN=Taf5 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.625e-21 Identity = 57/194 (29.38%), Postives = 106/194 (54.64%), Query Frame = 2 Query: 173 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAANQINQKEVHWGLLED 751 + + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +++LV H EA++FF F D E + DL+ L + H++ E R SK ++I + SY+LL ++L + Q+ ++ I+ E + + G P S DA + +L G +A + N+ +V +GLL++ Sbjct: 191 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRIYRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG---EAKREANKSKVFFGLLKE 380
BLAST of CX672549 vs. ExPASy Swiss-Prot
Match: TAF5_ENCCU (Transcription initiation factor TFIID subunit 5 OS=Encephalitozoon cuniculi GN=TAF5 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.347e-20 Identity = 47/167 (28.14%), Postives = 94/167 (56.29%), Query Frame = 2 Query: 251 QDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLED 751 + Y L++W SLDL+K++LL +LYP+FIH + DL+ + EA+ FF +R DH ++++ E + + H+ E FA++ ++SK ++ + +Y+++LL+ +L + T +L I+N+ ++ +V G S +++ + D + +E +L D Sbjct: 20 ETSYVSLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDH-YNKSEEIKQFESIYTVQHIHENNFAYTFKNSKYHLSMGRYAFDLLINFLEERNLTYILKILNQHLDIKVYVGPKSEERPQGIETSVVDAEIDLTTFLVSRECEDAILGD 185
BLAST of CX672549 vs. ExPASy Swiss-Prot
Match: TAF73_SCHPO (Transcription initiation factor TFIID subunit taf73 OS=Schizosaccharomyces pombe GN=taf73 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.550e-19 Identity = 64/200 (32.00%), Postives = 104/200 (52.00%), Query Frame = 2 Query: 71 EFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQ---STKMLGIINERINFQVSPGQPSSISD 661 + V YL KKG+S E L+ EI SS P E + SE+ Y Y LR W +LDLYK +L VLYP+F+H ++DL+ K + A FF +FR +HE++H D++ L + S +EE+E A R +K I + +++LL+Q+L + + S ++ ++N+ I+ +++ Q D Sbjct: 17 KIVLDYLFKKGYSRTEAMLRLEI----SSVGAIP------EEQQDWHIGASET------YVQVYILLRDWIDGTLDLYKPKLQKVLYPIFVHSYLDLLQKNDPEMAIYFFESFRIEHEVLHGYDIRALAQLKIASDVEEIEIAQLYRKNKYRINFTRSTFDLLVQFLFENEVNGSGIIIRLLNQYIDIKITMPQVEGKED 200
BLAST of CX672549 vs. ExPASy Swiss-Prot
Match: TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae GN=TAF5 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.424e-17 Identity = 62/216 (28.70%), Postives = 105/216 (48.61%), Query Frame = 2 Query: 77 VATYLKKKGFSEAENALQAEIQRNKSSNN-----------------------------TNPIDILN--DPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQS---TKMLGIINERIN 622 V YL KKG+ E L+AE R + N +NP ++ + D E E + P Y YS L++W SSL++YK EL +++YP+FI+ F++LVAK + AR FF+ F D + H ++ +L V S H++E E A + + K I + + + LLL +L++ +S + ++ +IN+ ++ Sbjct: 64 VLEYLNKKGYHRTEAMLRAESGRTLTPQNKQSPANTKTGKFPEQSSIPPNPGKTAKPISNPTNLSSKRDAEGGIVSSGRLEGLNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKNPVY-ARRFFDRFSPDFKDFHGSEINRLFSVNSIDHIKENEVASAFQSHKYRITMSKTTLNLLLYFLNENESIGGSLIISVINQHLD 278
BLAST of CX672549 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13 Identity = 47/187 (25.13%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 194 ELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSN-QDAANQINQKEVHWGLLED 751 EL+KF + Y+ Y +LR++ SLD+YKHEL VLYP+ + + ++A G ++A+ F ++ D + ++ L L + P L E + ++ K I++ + S+ L +++ + + I+++ ++F G + + V GS+ +A Q N+ V++GLL++ Sbjct: 101 ELAKFI---DDDSFDAQHYEQAYKELRTFVEDSLDIYKHELSMVLYPILVQIYFKILASGLREKAKEFIEKYKCDLDGYYIEGLFNLLLLSKPEELLENDLVVAMEQDKFVIRMSRDSHSLFKRHIQDRRQEVVADIVSKYLHFDTYEGM---ARNKLQCVATAGSHLGEAKRQDNKMRVYYGLLKE 281 The following BLAST results are available for this feature:
BLAST of CX672549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672549 ID=CX672549; Name=CX672549; organism=Citrus sinensis; type=EST; length=766bpback to top |