CX672520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672520 vs. ExPASy Swiss-Prot
Match: U308_ARATH (UPF0308 protein At2g37240, chloroplastic OS=Arabidopsis thaliana GN=At2g37240 PE=2 SV=2) HSP 1 Score: 317.005 bits (811), Expect = 8.294e-86 Identity = 150/182 (82.42%), Postives = 165/182 (90.66%), Query Frame = 1 Query: 223 TKNLLDTVKVYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKACCS 768 T + LDTVKV D+ GN IPISDLWKDRKAVVAFARHFGCVLCRKRA YLA KKDVMDASGVALVLIGPGS++QA TF EQTKFKGEVYADPNH+SYEAL FVSGV VTFTPKA +KI++SYMEGYRQDWKLSF +DTV RGGWQQGGI+VAGPGK NISYI +DKEAGDDP +++ILKACC+ Sbjct: 67 TADSLDTVKVLDLRGNEIPISDLWKDRKAVVAFARHFGCVLCRKRAAYLAEKKDVMDASGVALVLIGPGSIDQANTFVEQTKFKGEVYADPNHASYEALEFVSGVSVTFTPKAAMKILESYMEGYRQDWKLSFMKDTVERGGWQQGGILVAGPGKDNISYIRKDKEAGDDPPVEEILKACCA 248
BLAST of CX672520 vs. ExPASy Swiss-Prot
Match: CI021_HUMAN (UPF0308 protein C9orf21 OS=Homo sapiens GN=C9orf21 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.928e-16 Identity = 53/177 (29.94%), Postives = 86/177 (48.59%), Query Frame = 1 Query: 250 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQD-WK------LSFERDTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILK 756 V D G +P L+++R+AVV F RHF C +C++ + LA + + + V L++IG S F + T + E+Y DP Y+ L G + + ++ I + + G Q W+ F+ D QQGG ++ GPG +NI +IHRD+ D I +L+ Sbjct: 39 VLDARGQRVPFGALFRERRAVVVFVRHFLCYICKEYVEDLAKIPRSFLQEANVTLIVIGQSSYHHIEPFCKLTGYSHEIYVDPEREIYKRLGMKRGEEIASSGQSP-HIKSNLLSGSLQSLWRAVTGPLFDFQGDPA-----QQGGTLILGPG-NNIHFIHRDRNRLDHKPINSVLQ 208
BLAST of CX672520 vs. ExPASy Swiss-Prot
Match: CI021_MOUSE (UPF0308 protein C9orf21 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.543e-15 Identity = 53/177 (29.94%), Postives = 88/177 (49.72%), Query Frame = 1 Query: 250 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQD-WK------LSFERDTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILK 756 V D +G + L+++R+AVV F RHF C +C++ + LA K V+ + V L++IG S F + T + E+Y DP Y+ L G ++ + ++ I + + G Q W+ F+ D QQGG ++ GPG +NI ++HRD+ D I +L+ Sbjct: 39 VLDASGRRVTFGALFRERRAVVVFVRHFLCYVCKEYVEDLAKIPKSVLREADVTLIVIGQSSYHHIEPFCKLTGYSHEIYVDPEREIYKRLGMKRGEEISSSGQSP-HIKSNLLSGSLQSLWRAVTGPLFDFQGDPA-----QQGGTLILGPG-NNIHFVHRDRNRLDHKPINSVLQ 208
BLAST of CX672520 vs. ExPASy Swiss-Prot
Match: CI021_BOVIN (UPF0308 protein C9orf21 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.660e-15 Identity = 49/176 (27.84%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 250 VYDVNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLA-AKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWK------LSFERDTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILK 756 V D +G + +L+++R+A+V F RHF C +C++ + LA K + + V L++IG S F + T + E+Y DP Y+ L G + + ++ R W+ F+ D QQGG ++ GPG +NI +IH D+ D I +L+ Sbjct: 41 VLDASGRPVLFGELFRERRAIVVFVRHFLCYICKEYVEDLAKIPKSFLQEANVTLIVIGQSSYHHIEPFCKLTGYSHEIYVDPEREIYKRLGMKRGEEIASSGQSPHVKSNILSGSIRSLWRAVTGPLFDFQGDPA-----QQGGTLILGPG-NNIHFIHHDRNRLDHKPINSVLQ 210
BLAST of CX672520 vs. ExPASy Swiss-Prot
Match: CA093_DANRE (Uncharacterized protein C1orf93 homolog OS=Danio rerio GN=zgc:85644 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.558e-12 Identity = 46/166 (27.71%), Postives = 78/166 (46.99%), Query Frame = 1 Query: 265 GNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKA-GLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKA 759 G + I LW+++ V+ F R FGC +CR A ++ + + A G+ALV IGP + F + FKG++Y D Y+ L F + P A G K+ + + + + +F D + Q GG+++ G + K D+P +++I KA Sbjct: 20 GEMVEIGSLWREQAVVLFFLRRFGCQVCRWMAAEVSKLEKDLKAHGIALVGIGPEET-GVKEFKDGGFFKGDIYIDEMKQCYKDLGFKRYNAINVVPAAMGKKVREIASKASAEGIQGNFSGDLL-----QSGGMLIVAKGGEKVLLHFIQKSPADNPPLEEITKA 179
BLAST of CX672520 vs. ExPASy Swiss-Prot
Match: CA093_BOVIN (Uncharacterized protein C1orf93 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.711e-11 Identity = 49/167 (29.34%), Postives = 80/167 (47.90%), Query Frame = 1 Query: 259 VNGNAIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDVMDASGVALVLIGPGSVEQARTFSEQTKFKGEVYADPNHSSYEALSFVSGVLVTFTPKAGLKIIQSYMEGYRQDWKLSFERDTVSRGGWQQGGIIVAGPGKSNISYIHRDKEAGDDPDIQDILKA 759 V G A+ + +LW+++ VVA R FGC++CR A L+ K ++D GV LV +GP ++ + F + F GE+Y D + Y+ L F ++ P A K ++ K + +S Q GG++V G + K GD ++ IL+A Sbjct: 18 VTGEAVELRNLWQEQACVVAGLRRFGCMVCRWIARDLSNLKGLLDQHGVRLVGVGPEAL-GLQEFLDGGYFAGELYLDESKQFYKELGFKRYNSLSILPAALGKPVRE----VAAKAKAVGIQGNLSGDLLQSGGLLVVAKGGDKVLLHFVQKSPGDYAPLESILQA 179 The following BLAST results are available for this feature:
BLAST of CX672520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672520 ID=CX672520; Name=CX672520; organism=Citrus sinensis; type=EST; length=839bpback to top |