CX672517
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672517 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15 Identity = 55/143 (38.46%), Postives = 78/143 (54.55%), Query Frame = -3 Query: 475 PRQVAIWFQNRPARWKTKQLEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXLTDKLQVKEKESKNTELPVVNKQEPPQISEPVADSAASEGKVCKASVVACKQED---ISSAKSDIFDSDSPHYTDGVHSSLLETCDSSY 894 PRQVA+WFQNR ARWKTKQLE+DYD+L+++Y+ L ++YD++ LT+KLQ K++ + P EP Q+ +PV +AA A K ED S S + D D+P LL++CDS + Sbjct: 106 PRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANE---PPGQVPEPNQL-DPVYINAA-----------AIKTEDRLSSGSVGSAVLDDDAP--------QLLDSCDSYF 225
BLAST of CX672517 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.645e-13 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = -3 Query: 532 PRQVAIWFQNRPARWKTKQLEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXLTDKLQVKEKESKNTELPVVN----------KQEPPQISEPVADSAASEGKVCKASVVACKQE-DISSAKSDIFDSDS 894 PRQVA+WFQNR ARWKTKQLE+D+D L+ S+++L+AD+D L LT+KLQ KE ++ + V+ K P EP + AA+ + + V + S S + D+D+ Sbjct: 115 PRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPAAADVKVAVPDAEEPALEEAAAAFEEQQEQQVKAEDRLSTGSGGSAVVDTDA 246
BLAST of CX672517 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.645e-13 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = -3 Query: 532 PRQVAIWFQNRPARWKTKQLEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXLTDKLQVKEKESKNTELPVVN----------KQEPPQISEPVADSAASEGKVCKASVVACKQE-DISSAKSDIFDSDS 894 PRQVA+WFQNR ARWKTKQLE+D+D L+ S+++L+AD+D L LT+KLQ KE ++ + V+ K P EP + AA+ + + V + S S + D+D+ Sbjct: 117 PRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPAAADVKVAVPDAEEPALEEAAAAFEEQQEQQVKAEDRLSTGSGGSAVVDTDA 248
BLAST of CX672517 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.760e-12 Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = -3 Query: 607 PRQVAIWFQNRPARWKTKQLEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXLTDKLQVKEKES-----KNTELPVVNKQEPPQISEPVADSAASEGKV 894 PRQVA+WFQNR ARWKTKQLE+DY L+ SY++L+AD+D L L KL ++ + K E P + +PP P S + V Sbjct: 81 PRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDADPPATGAPQGSSESDSSAV 181
BLAST of CX672517 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.760e-12 Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = -3 Query: 607 PRQVAIWFQNRPARWKTKQLEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXLTDKLQVKEKES-----KNTELPVVNKQEPPQISEPVADSAASEGKV 894 PRQVA+WFQNR ARWKTKQLE+DY L+ SY++L+AD+D L L KL ++ + K E P + +PP P S + V Sbjct: 81 PRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDADPPATGAPQGSSESDSSAV 181
BLAST of CX672517 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11 Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = -3 Query: 619 PRQVAIWFQNRPARWKTKQLEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXLTDKLQ---VKEKESKN-----TELPVVNKQEPPQISEPVADSAAS 894 PRQVA+WFQNR ARWKTKQLEKDY VL+ Y+SL+ ++D+L L KL +E+E +N TE + K+E + E + ++ +S Sbjct: 100 PRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKITEAPSS 199
BLAST of CX672517 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = -3 Query: 628 PRQVAIWFQNRPARWKTKQLEKDYDVLQNSYNSLKADYDNLFXXXXXXXXXXXXLTDKLQVKEKESKNTELPVVNKQEPPQISEPVADS 894 PRQVA+WFQNR ARWKTKQLEKDY VL+ Y+SL+ ++D+L + K+ +E + N + K+E ++ + S Sbjct: 97 PRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAITEGVKEEEVHKTDSIPSS 185
BLAST of CX672517 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11 Identity = 29/41 (70.73%), Postives = 36/41 (87.80%), Query Frame = -3 Query: 772 PRQVAIWFQNRPARWKTKQLEKDYDVLQNSYNSLKADYDNL 894 PRQVA+WFQNR ARWKTKQLE+DY L++SY+SL+ D+D L Sbjct: 89 PRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDAL 129
BLAST of CX672517 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11 Identity = 29/41 (70.73%), Postives = 36/41 (87.80%), Query Frame = -3 Query: 772 PRQVAIWFQNRPARWKTKQLEKDYDVLQNSYNSLKADYDNL 894 PRQVA+WFQNR ARWKTKQLE+DY L++SY+SL+ D+D L Sbjct: 89 PRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDAL 129 The following BLAST results are available for this feature:
BLAST of CX672517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672517 ID=CX672517; Name=CX672517; organism=Citrus sinensis; type=EST; length=896bpback to top |